RNA–Protein interactions for RNA: ENST00000564353.5

CLK3-215, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 2,847 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-215ENST00000564353 SPSB4Q96A44 273 aa11.5□□□□□ -0.57
CLK3-215ENST00000564353 KCNJ16Q9NPI9 418 aa11.5□□□□□ -0.57
CLK3-215ENST00000564353 SEC11BP0C7V7 166 aa11.5□□□□□ -0.57
CLK3-215ENST00000564353 IL13RA2Q14627 380 aa11.5□□□□□ -0.57
CLK3-215ENST00000564353 DCAF10Q5QP82 559 aa11.5□□□□□ -0.57
CLK3-215ENST00000564353 CCDC54Q8NEL0 328 aa11.5□□□□□ -0.57
CLK3-215ENST00000564353 RIMS4Q9H426 269 aaPredicted RBP11.5□□□□□ -0.57
CLK3-215ENST00000564353 IL36GQ9NZH8 169 aa11.5□□□□□ -0.57
CLK3-215ENST00000564353 KCNS2Q9ULS6 477 aa11.5□□□□□ -0.57
CLK3-215ENST00000564353 TRAV24A0A0B4J272 114 aa11.49□□□□□ -0.57
CLK3-215ENST00000564353 B4E171 279 aa11.49□□□□□ -0.57
CLK3-215ENST00000564353 TCAPO15273 167 aa11.49□□□□□ -0.57
CLK3-215ENST00000564353 MT-CO3P00414 261 aa11.49□□□□□ -0.57
CLK3-215ENST00000564353 COLCA1Q6ZS62 124 aa11.49□□□□□ -0.57
CLK3-215ENST00000564353 LRTM2Q8N967 370 aa11.49□□□□□ -0.57
CLK3-215ENST00000564353 C14orf144Q96I85 54 aa11.49□□□□□ -0.57
CLK3-215ENST00000564353 OR14J1Q9UGF5 321 aa11.49□□□□□ -0.57
CLK3-215ENST00000564353 MMP24Q9Y5R2 645 aa11.49□□□□□ -0.57
CLK3-215ENST00000564353 CACNA1DQ01668 2161 aa11.49□□□□□ -0.57
CLK3-215ENST00000564353 MGAQ8IWI9 3026 aa11.49□□□□□ -0.57
CLK3-215ENST00000564353 GTF3C1Q12789 2109 aa11.49□□□□□ -0.57
CLK3-215ENST00000564353 PGLYRP1O75594 196 aaPredicted RBP11.49□□□□□ -0.57
CLK3-215ENST00000564353 NAPSAO96009 420 aa11.49□□□□□ -0.57
CLK3-215ENST00000564353 GPR157Q5UAW9 335 aa11.49□□□□□ -0.57
CLK3-215ENST00000564353 SLC25A24Q6NUK1 477 aa11.49□□□□□ -0.57
CLK3-215ENST00000564353 Q6ZRM9 215 aa11.49□□□□□ -0.57
CLK3-215ENST00000564353 APOBEC3DQ96AK3 386 aaPredicted RBP11.49□□□□□ -0.57
CLK3-215ENST00000564353 POM121L2Q96KW2 1035 aa11.49□□□□□ -0.57
CLK3-215ENST00000564353 B4GALT7Q9UBV7 327 aa11.49□□□□□ -0.57
CLK3-215ENST00000564353 RNF150Q9ULK6 438 aa11.49□□□□□ -0.57
CLK3-215ENST00000564353 FZR1Q9UM11 496 aa11.49□□□□□ -0.57
CLK3-215ENST00000564353 KPTNQ9Y664 436 aa11.49□□□□□ -0.57
CLK3-215ENST00000564353 H0YL77 283 aa11.48□□□□□ -0.57
CLK3-215ENST00000564353 HSPA12AO43301 675 aa11.48□□□□□ -0.57
CLK3-215ENST00000564353 WDR1O75083 606 aa11.48□□□□□ -0.57
CLK3-215ENST00000564353 SLC34A2O95436 690 aa11.48□□□□□ -0.57
CLK3-215ENST00000564353 IGHEP01854 428 aa11.48□□□□□ -0.57
CLK3-215ENST00000564353 MEOX1P50221 254 aa11.48□□□□□ -0.57
CLK3-215ENST00000564353 PLP2Q04941 152 aa11.48□□□□□ -0.57
CLK3-215ENST00000564353 MDP1Q86V88 176 aa11.48□□□□□ -0.57
CLK3-215ENST00000564353 MRPL30Q8TCC3 161 aaKnown RBP11.48□□□□□ -0.57
CLK3-215ENST00000564353 TAAR9Q96RI9 348 aa11.48□□□□□ -0.57
CLK3-215ENST00000564353 FAM86C1Q9NVL1 165 aa11.48□□□□□ -0.57
CLK3-215ENST00000564353 MED12LQ86YW9 2145 aa11.48□□□□□ -0.57
CLK3-215ENST00000564353 ANKRD30BLA7E2S9 258 aa11.48□□□□□ -0.57
CLK3-215ENST00000564353 GRPP07492 148 aa11.48□□□□□ -0.57
CLK3-215ENST00000564353 ZNF14P17017 642 aaPredicted RBP11.48□□□□□ -0.57
CLK3-215ENST00000564353 SULT1A1P50225 295 aa11.48□□□□□ -0.57
CLK3-215ENST00000564353 COTL1Q14019 142 aa11.48□□□□□ -0.57
CLK3-215ENST00000564353 RNFT1Q5M7Z0 435 aa11.48□□□□□ -0.57
CLK3-215ENST00000564353 ZNF343Q6P1L6 599 aa11.48□□□□□ -0.57
CLK3-215ENST00000564353 PLPPR2Q96GM1 343 aa11.48□□□□□ -0.57
CLK3-215ENST00000564353 RSG1Q9BU20 258 aa11.48□□□□□ -0.57
CLK3-215ENST00000564353 STRADBQ9C0K7 418 aa11.48□□□□□ -0.57
CLK3-215ENST00000564353 ARV1Q9H2C2 271 aa11.48□□□□□ -0.57
CLK3-215ENST00000564353 TAAR3PQ9P1P4 343 aa11.48□□□□□ -0.57
CLK3-215ENST00000564353 ZNF391Q9UJN7 358 aa11.48□□□□□ -0.57
CLK3-215ENST00000564353 CDIPTO14735 213 aa11.47□□□□□ -0.57
CLK3-215ENST00000564353 MBP02144 154 aa11.47□□□□□ -0.57
CLK3-215ENST00000564353 ACP1P24666 158 aa11.47□□□□□ -0.57
CLK3-215ENST00000564353 GNG10P50151 68 aa11.47□□□□□ -0.57
CLK3-215ENST00000564353 IDH3GP51553 393 aaPredicted RBP11.47□□□□□ -0.57
CLK3-215ENST00000564353 FGF8P55075 233 aaPredicted RBP11.47□□□□□ -0.57
CLK3-215ENST00000564353 UCP3P55916 312 aa11.47□□□□□ -0.57
CLK3-215ENST00000564353 SRSF6Q13247 344 aaKnown RBP11.47□□□□□ -0.57
CLK3-215ENST00000564353 PCSK4Q6UW60 755 aa11.47□□□□□ -0.57
CLK3-215ENST00000564353 THNSL2Q86YJ6 484 aa11.47□□□□□ -0.57
CLK3-215ENST00000564353 IL22RA1Q8N6P7 574 aa11.47□□□□□ -0.57
CLK3-215ENST00000564353 OR10J5Q8NHC4 309 aa11.47□□□□□ -0.57
CLK3-215ENST00000564353 LYPD6BQ8NI32 183 aa11.47□□□□□ -0.57
CLK3-215ENST00000564353 RBMXL1Q96E39 390 aaKnown RBP11.47□□□□□ -0.57
CLK3-215ENST00000564353 K7N7A8 449 aa11.47□□□□□ -0.57
CLK3-215ENST00000564353 TUSC2O75896 110 aa11.47□□□□□ -0.57
CLK3-215ENST00000564353 LYZL6O75951 148 aa11.47□□□□□ -0.57
CLK3-215ENST00000564353 CDS2O95674 445 aa11.47□□□□□ -0.57
CLK3-215ENST00000564353 IL18BPO95998 194 aa11.47□□□□□ -0.57
CLK3-215ENST00000564353 SERPINE2P07093 398 aa11.47□□□□□ -0.57
CLK3-215ENST00000564353 NQO2P16083 231 aa11.47□□□□□ -0.57
CLK3-215ENST00000564353 APLNRP35414 380 aa11.47□□□□□ -0.57
CLK3-215ENST00000564353 CLN3Q13286 438 aa11.47□□□□□ -0.57
CLK3-215ENST00000564353 PEAR1Q5VY43 1037 aaPredicted RBP11.47□□□□□ -0.57
CLK3-215ENST00000564353 CMTM1Q8IZ96 169 aa11.47□□□□□ -0.57
CLK3-215ENST00000564353 FAM58AQ8N1B3 248 aa11.47□□□□□ -0.57
CLK3-215ENST00000564353 PLPPR1Q8TBJ4 325 aa11.47□□□□□ -0.57
CLK3-215ENST00000564353 GPR146Q96CH1 333 aa11.47□□□□□ -0.57
CLK3-215ENST00000564353 OR2J1Q9GZK6 312 aa11.47□□□□□ -0.57
CLK3-215ENST00000564353 VSIRQ9H7M9 311 aa11.47□□□□□ -0.57
CLK3-215ENST00000564353 ATP23Q9Y6H3 246 aa11.47□□□□□ -0.57
CLK3-215ENST00000564353 RP1L1Q8IWN7 2480 aaPredicted RBP11.47□□□□□ -0.57
CLK3-215ENST00000564353 C1orf196B1AJZ1 125 aa11.46□□□□□ -0.57
CLK3-215ENST00000564353 HMGB3O15347 200 aaKnown RBP11.46□□□□□ -0.57
CLK3-215ENST00000564353 METTL15P1P0C7V9 234 aa11.46□□□□□ -0.57
CLK3-215ENST00000564353 LINC00205P59089 165 aa11.46□□□□□ -0.57
CLK3-215ENST00000564353 SOHLH1Q5JUK2 328 aa11.46□□□□□ -0.57
CLK3-215ENST00000564353 TGIF2LXQ8IUE1 241 aa11.46□□□□□ -0.57
CLK3-215ENST00000564353 DTD1Q8TEA8 209 aa11.46□□□□□ -0.57
CLK3-215ENST00000564353 OR5P3Q8WZ94 311 aa11.46□□□□□ -0.57
CLK3-215ENST00000564353 SLC35B3Q9H1N7 401 aa11.46□□□□□ -0.57
CLK3-215ENST00000564353 PLEKHF2Q9H8W4 249 aa11.46□□□□□ -0.57
CLK3-215ENST00000564353 LYRM2Q9NU23 88 aaPredicted RBP11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 138.4 ms