RNA–Protein interactions for RNA: ENST00000564172.1

GDE1-203, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene GDE1, Length 2,238 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-203ENST00000564172 MRGPRDQ8TDS7 321 aa15.1■□□□□ 0.01
GDE1-203ENST00000564172 FAM46BQ96A09 425 aa15.1■□□□□ 0.01
GDE1-203ENST00000564172 CMBLQ96DG6 245 aa15.1■□□□□ 0.01
GDE1-203ENST00000564172 IGHV2OR16-5A0A0B4J2B6 119 aa15.09■□□□□ 0.01
GDE1-203ENST00000564172 SOD3P08294 240 aa15.09■□□□□ 0.01
GDE1-203ENST00000564172 CCKARP32238 428 aa15.09■□□□□ 0.01
GDE1-203ENST00000564172 ZNF83P51522 516 aa15.09■□□□□ 0.01
GDE1-203ENST00000564172 PRDX4Q13162 271 aa15.09■□□□□ 0.01
GDE1-203ENST00000564172 AKR1C8PQ5T2L2 129 aa15.09■□□□□ 0.01
GDE1-203ENST00000564172 NBASA2RRP1 2371 aa15.09■□□□□ 0.01
GDE1-203ENST00000564172 C16orf97H3BN30 126 aa15.09■□□□□ 0.01
GDE1-203ENST00000564172 SOX15O60248 233 aa15.09■□□□□ 0.01
GDE1-203ENST00000564172 LILRA1O75019 489 aa15.09■□□□□ 0.01
GDE1-203ENST00000564172 BMI1P35226 326 aa15.09■□□□□ 0.01
GDE1-203ENST00000564172 AKR1C3P42330 323 aa15.09■□□□□ 0.01
GDE1-203ENST00000564172 ETFRF1Q6IPR1 90 aa15.09■□□□□ 0.01
GDE1-203ENST00000564172 INO80EQ8NBZ0 244 aaPredicted RBP15.09■□□□□ 0.01
GDE1-203ENST00000564172 TMEM104Q8NE00 496 aa15.09■□□□□ 0.01
GDE1-203ENST00000564172 KCNG3Q8TAE7 436 aa15.09■□□□□ 0.01
GDE1-203ENST00000564172 PACRGQ96M98 296 aaPredicted RBP15.09■□□□□ 0.01
GDE1-203ENST00000564172 COL6A6A6NMZ7 2263 aa15.09■□□□□ 0.01
GDE1-203ENST00000564172 A0A1W2PP11 408 aa15.08■□□□□ 0
GDE1-203ENST00000564172 ADAP1O75689 374 aa15.08■□□□□ 0
GDE1-203ENST00000564172 MELTFP08582 738 aa15.08■□□□□ 0
GDE1-203ENST00000564172 PTHLHP12272 177 aa15.08■□□□□ 0
GDE1-203ENST00000564172 C3orf36Q3SXR2 165 aa15.08■□□□□ 0
GDE1-203ENST00000564172 SLC22A6Q4U2R8 563 aa15.08■□□□□ 0
GDE1-203ENST00000564172 UNQ6126/PRO20091Q6UXV3 157 aa15.08■□□□□ 0
GDE1-203ENST00000564172 TRAV18A0A075B6X5 111 aa15.08■□□□□ 0
GDE1-203ENST00000564172 CCL21O00585 134 aa15.08■□□□□ 0
GDE1-203ENST00000564172 RPS10P46783 165 aaKnown RBP15.08■□□□□ 0
GDE1-203ENST00000564172 ATP1B3P54709 279 aa15.08■□□□□ 0
GDE1-203ENST00000564172 MOGAT2Q3SYC2 334 aa15.08■□□□□ 0
GDE1-203ENST00000564172 DNM1P46Q6ZS02 220 aa15.08■□□□□ 0
GDE1-203ENST00000564172 ZDHHC23Q8IYP9 409 aa15.08■□□□□ 0
GDE1-203ENST00000564172 OR5T1Q8NG75 326 aa15.08■□□□□ 0
GDE1-203ENST00000564172 OR5M8Q8NGP6 311 aa15.08■□□□□ 0
GDE1-203ENST00000564172 CCDC107Q8WV48 283 aa15.08■□□□□ 0
GDE1-203ENST00000564172 ZNF2Q9BSG1 426 aaPredicted RBP15.08■□□□□ 0
GDE1-203ENST00000564172 A0A0A6YYH2 397 aa15.07■□□□□ 0
GDE1-203ENST00000564172 A6NJ64 397 aa15.07■□□□□ 0
GDE1-203ENST00000564172 ANKRD30BLA7E2S9 258 aa15.07■□□□□ 0
GDE1-203ENST00000564172 K7EP13 123 aa15.07■□□□□ 0
GDE1-203ENST00000564172 M0R1B8 84 aa15.07■□□□□ 0
GDE1-203ENST00000564172 RAB27BO00194 218 aa15.07■□□□□ 0
GDE1-203ENST00000564172 GZMBP10144 247 aa15.07■□□□□ 0
GDE1-203ENST00000564172 ERVFC1-1P60608 527 aa15.07■□□□□ 0
GDE1-203ENST00000564172 CEACAM21Q3KPI0 293 aa15.07■□□□□ 0
GDE1-203ENST00000564172 KLF14Q8TD94 323 aaPredicted RBP15.07■□□□□ 0
GDE1-203ENST00000564172 AKR1E2Q96JD6 320 aa15.07■□□□□ 0
GDE1-203ENST00000564172 MICU1Q9BPX6 476 aa15.07■□□□□ 0
GDE1-203ENST00000564172 NBEAQ8NFP9 2946 aa15.07■□□□□ 0
GDE1-203ENST00000564172 HIST1H2BKO60814 126 aa15.07■□□□□ 0
GDE1-203ENST00000564172 MPIG6BO95866 241 aa15.07■□□□□ 0
GDE1-203ENST00000564172 GCGP01275 180 aa15.07■□□□□ 0
GDE1-203ENST00000564172 HIST1H2BJP06899 126 aa15.07■□□□□ 0
GDE1-203ENST00000564172 TMEM225BP0DP42 221 aa15.07■□□□□ 0
GDE1-203ENST00000564172 HIST1H2BOP23527 126 aa15.07■□□□□ 0
GDE1-203ENST00000564172 HIST1H2BBP33778 126 aa15.07■□□□□ 0
GDE1-203ENST00000564172 OR3A1P47881 315 aa15.07■□□□□ 0
GDE1-203ENST00000564172 HIST1H2BDP58876 126 aa15.07■□□□□ 0
GDE1-203ENST00000564172 HIST1H2BCP62807 126 aa15.07■□□□□ 0
GDE1-203ENST00000564172 NKX6-1P78426 367 aaPredicted RBP15.07■□□□□ 0
GDE1-203ENST00000564172 PSG7Q13046 419 aa15.07■□□□□ 0
GDE1-203ENST00000564172 MEF2DQ14814 521 aa15.07■□□□□ 0
GDE1-203ENST00000564172 HIST2H2BEQ16778 126 aa15.07■□□□□ 0
GDE1-203ENST00000564172 HIST2H2BFQ5QNW6 126 aaPredicted RBP15.07■□□□□ 0
GDE1-203ENST00000564172 HIST1H2BHQ93079 126 aa15.07■□□□□ 0
GDE1-203ENST00000564172 HIST1H2BNQ99877 126 aa15.07■□□□□ 0
GDE1-203ENST00000564172 HIST1H2BMQ99879 126 aa15.07■□□□□ 0
GDE1-203ENST00000564172 FGF23Q9GZV9 251 aaPredicted RBP15.07■□□□□ 0
GDE1-203ENST00000564172 LPAR5Q9H1C0 372 aa15.07■□□□□ 0
GDE1-203ENST00000564172 BANF2Q9H503 90 aa15.07■□□□□ 0
GDE1-203ENST00000564172 MPC1Q9Y5U8 109 aa15.07■□□□□ 0
GDE1-203ENST00000564172 TEX13DA0A0J9YY54 714 aaPredicted RBP15.06■□□□□ 0
GDE1-203ENST00000564172 SPRY1O43609 319 aaPredicted RBP15.06■□□□□ 0
GDE1-203ENST00000564172 FABP4P15090 132 aa15.06■□□□□ 0
GDE1-203ENST00000564172 TUBG1P23258 451 aa15.06■□□□□ 0
GDE1-203ENST00000564172 FOXRED2Q8IWF2 684 aa15.06■□□□□ 0
GDE1-203ENST00000564172 TMEM59Q9BXS4 323 aa15.06■□□□□ 0
GDE1-203ENST00000564172 CST11Q9H112 138 aa15.06■□□□□ 0
GDE1-203ENST00000564172 HRH4Q9H3N8 390 aa15.06■□□□□ 0
GDE1-203ENST00000564172 TUBG2Q9NRH3 451 aa15.06■□□□□ 0
GDE1-203ENST00000564172 KLK11Q9UBX7 282 aa15.06■□□□□ 0
GDE1-203ENST00000564172 ANGPTL7O43827 346 aa15.05■□□□□ 0
GDE1-203ENST00000564172 HLA-GP17693 338 aa15.05■□□□□ 0
GDE1-203ENST00000564172 CD80P33681 288 aa15.05■□□□□ 0
GDE1-203ENST00000564172 MPV17P39210 176 aa15.05■□□□□ 0
GDE1-203ENST00000564172 ALKBH6Q3KRA9 238 aa15.05■□□□□ 0
GDE1-203ENST00000564172 GGNBP1Q5YKI7 109 aa15.05■□□□□ 0
GDE1-203ENST00000564172 SLC22A25Q6T423 547 aa15.05■□□□□ 0
GDE1-203ENST00000564172 ASCL4Q6XD76 172 aa15.05■□□□□ 0
GDE1-203ENST00000564172 OR5A2Q8NGI9 324 aa15.05■□□□□ 0
GDE1-203ENST00000564172 RNASE8Q8TDE3 154 aaKnown RBP15.05■□□□□ 0
GDE1-203ENST00000564172 DVL3Q92997 716 aaPredicted RBP15.05■□□□□ 0
GDE1-203ENST00000564172 HIST1H2AAQ96QV6 131 aa15.05■□□□□ 0
GDE1-203ENST00000564172 ELL3Q9HB65 397 aaPredicted RBP15.05■□□□□ 0
GDE1-203ENST00000564172 TAS2R8Q9NYW2 309 aa15.05■□□□□ 0
GDE1-203ENST00000564172 PPBPP02775 128 aa15.05■□□□□ -0
GDE1-203ENST00000564172 TBPP20226 339 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms