RNA–Protein interactions for RNA: ENST00000563842.5

CLK3-213, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 860 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-213ENST00000563842 IL3RAP26951 378 aa10.78□□□□□ -0.68
CLK3-213ENST00000563842 PSMB9P28065 219 aa10.78□□□□□ -0.68
CLK3-213ENST00000563842 RAB7AP51149 207 aa10.78□□□□□ -0.68
CLK3-213ENST00000563842 MADCAM1Q13477 382 aa10.78□□□□□ -0.68
CLK3-213ENST00000563842 NKAPLQ5M9Q1 402 aa10.78□□□□□ -0.68
CLK3-213ENST00000563842 SIGIRRQ6IA17 410 aa10.78□□□□□ -0.68
CLK3-213ENST00000563842 CD200R1LQ6Q8B3 271 aa10.78□□□□□ -0.68
CLK3-213ENST00000563842 C8orf31Q8N9H6 132 aa10.78□□□□□ -0.68
CLK3-213ENST00000563842 OR10X1Q8NGY0 326 aa10.78□□□□□ -0.68
CLK3-213ENST00000563842 OR4K15Q8NH41 348 aa10.78□□□□□ -0.68
CLK3-213ENST00000563842 TOMM40LQ969M1 308 aa10.78□□□□□ -0.68
CLK3-213ENST00000563842 PRSS22Q9GZN4 317 aa10.78□□□□□ -0.68
CLK3-213ENST00000563842 ZNF696Q9H7X3 374 aa10.78□□□□□ -0.68
CLK3-213ENST00000563842 GFOD1Q9NXC2 390 aa10.78□□□□□ -0.68
CLK3-213ENST00000563842 TET2Q6N021 2002 aaPredicted RBP10.78□□□□□ -0.68
CLK3-213ENST00000563842 LY6LH3BQJ8 138 aa10.77□□□□□ -0.69
CLK3-213ENST00000563842 TIMM23O14925 209 aa10.77□□□□□ -0.69
CLK3-213ENST00000563842 LPLP06858 475 aa10.77□□□□□ -0.69
CLK3-213ENST00000563842 CHATP28329 748 aa10.77□□□□□ -0.69
CLK3-213ENST00000563842 BLVRBP30043 206 aaPredicted RBP10.77□□□□□ -0.69
CLK3-213ENST00000563842 GNG10P50151 68 aa10.77□□□□□ -0.69
CLK3-213ENST00000563842 QRFPP83859 136 aa10.77□□□□□ -0.69
CLK3-213ENST00000563842 OR10K2Q6IF99 312 aa10.77□□□□□ -0.69
CLK3-213ENST00000563842 ZNF773Q6PK81 442 aa10.77□□□□□ -0.69
CLK3-213ENST00000563842 CCBE1Q6UXH8 406 aaPredicted RBP10.77□□□□□ -0.69
CLK3-213ENST00000563842 OR8H3Q8N146 312 aa10.77□□□□□ -0.69
CLK3-213ENST00000563842 LINC00311Q8N616 119 aa10.77□□□□□ -0.69
CLK3-213ENST00000563842 CITED1Q99966 193 aa10.77□□□□□ -0.69
CLK3-213ENST00000563842 RIMS4Q9H426 269 aaPredicted RBP10.77□□□□□ -0.69
CLK3-213ENST00000563842 MBNL3Q9NUK0 354 aaKnown RBP10.77□□□□□ -0.69
CLK3-213ENST00000563842 PLEKHJ1Q9NW61 149 aa10.77□□□□□ -0.69
CLK3-213ENST00000563842 STEAP1Q9UHE8 339 aa10.77□□□□□ -0.69
CLK3-213ENST00000563842 C12orf77C9JDV5 145 aa10.76□□□□□ -0.69
CLK3-213ENST00000563842 CHST1O43916 411 aa10.76□□□□□ -0.69
CLK3-213ENST00000563842 IGHV3-7P01780 117 aa10.76□□□□□ -0.69
CLK3-213ENST00000563842 HBZP02008 142 aa10.76□□□□□ -0.69
CLK3-213ENST00000563842 FAM106CPP0CH98 169 aa10.76□□□□□ -0.69
CLK3-213ENST00000563842 UNC119Q13432 240 aa10.76□□□□□ -0.69
CLK3-213ENST00000563842 P2RY14Q15391 338 aa10.76□□□□□ -0.69
CLK3-213ENST00000563842 ARSJQ5FYB0 599 aaPredicted RBP10.76□□□□□ -0.69
CLK3-213ENST00000563842 TMEM219Q86XT9 240 aa10.76□□□□□ -0.69
CLK3-213ENST00000563842 THNSL2Q86YJ6 484 aa10.76□□□□□ -0.69
CLK3-213ENST00000563842 OR51D1Q8NGF3 324 aa10.76□□□□□ -0.69
CLK3-213ENST00000563842 LEAP2Q969E1 77 aa10.76□□□□□ -0.69
CLK3-213ENST00000563842 FAM3DQ96BQ1 224 aa10.76□□□□□ -0.69
CLK3-213ENST00000563842 GFI1Q99684 422 aa10.76□□□□□ -0.69
CLK3-213ENST00000563842 OCSTAMPQ9BR26 566 aa10.76□□□□□ -0.69
CLK3-213ENST00000563842 LIN7BQ9HAP6 207 aa10.76□□□□□ -0.69
CLK3-213ENST00000563842 GNG12Q9UBI6 72 aa10.76□□□□□ -0.69
CLK3-213ENST00000563842 M0QZ24 198 aa10.75□□□□□ -0.69
CLK3-213ENST00000563842 M0QZK8 103 aa10.75□□□□□ -0.69
CLK3-213ENST00000563842 GAPDHP04406 335 aaKnown RBP10.75□□□□□ -0.69
CLK3-213ENST00000563842 RCC1P18754 421 aaPredicted RBP10.75□□□□□ -0.69
CLK3-213ENST00000563842 RAB3BP20337 219 aa10.75□□□□□ -0.69
CLK3-213ENST00000563842 FGF9P31371 208 aaPredicted RBP10.75□□□□□ -0.69
CLK3-213ENST00000563842 EFNB2P52799 333 aa10.75□□□□□ -0.69
CLK3-213ENST00000563842 LOXL3P58215 753 aa10.75□□□□□ -0.69
CLK3-213ENST00000563842 C2orf76Q3KRA6 126 aa10.75□□□□□ -0.69
CLK3-213ENST00000563842 KCTD21Q4G0X4 260 aa10.75□□□□□ -0.69
CLK3-213ENST00000563842 PRR31Q5SQ13 230 aa10.75□□□□□ -0.69
CLK3-213ENST00000563842 STEAP3Q658P3 488 aa10.75□□□□□ -0.69
CLK3-213ENST00000563842 C6orf201Q7Z4U5 140 aa10.75□□□□□ -0.69
CLK3-213ENST00000563842 PRR18Q8N4B5 295 aa10.75□□□□□ -0.69
CLK3-213ENST00000563842 FAM89BQ8N5H3 189 aa10.75□□□□□ -0.69
CLK3-213ENST00000563842 OR56B1Q8NGI3 324 aa10.75□□□□□ -0.69
CLK3-213ENST00000563842 MRPL30Q8TCC3 161 aaKnown RBP10.75□□□□□ -0.69
CLK3-213ENST00000563842 SULT4A1Q9BR01 284 aa10.75□□□□□ -0.69
CLK3-213ENST00000563842 NICN1Q9BSH3 213 aa10.75□□□□□ -0.69
CLK3-213ENST00000563842 FAAP24Q9BTP7 215 aa10.75□□□□□ -0.69
CLK3-213ENST00000563842 LPAR5Q9H1C0 372 aa10.75□□□□□ -0.69
CLK3-213ENST00000563842 TAF9BQ9HBM6 251 aa10.75□□□□□ -0.69
CLK3-213ENST00000563842 CHMP1AQ9HD42 196 aaPredicted RBP10.75□□□□□ -0.69
CLK3-213ENST00000563842 ABRACLQ9P1F3 81 aa10.75□□□□□ -0.69
CLK3-213ENST00000563842 RAB22AQ9UL26 194 aa10.75□□□□□ -0.69
CLK3-213ENST00000563842 HSF4Q9ULV5 492 aa10.75□□□□□ -0.69
CLK3-213ENST00000563842 MGAT4AQ9UM21 535 aa10.75□□□□□ -0.69
CLK3-213ENST00000563842 STUB1Q9UNE7 303 aa10.75□□□□□ -0.69
CLK3-213ENST00000563842 SSR3Q9UNL2 185 aa10.75□□□□□ -0.69
CLK3-213ENST00000563842 WNK1Q9H4A3 2382 aa10.75□□□□□ -0.69
CLK3-213ENST00000563842 IGHV3-43A0A0B4J1X8 118 aa10.74□□□□□ -0.69
CLK3-213ENST00000563842 PEX14O75381 377 aa10.74□□□□□ -0.69
CLK3-213ENST00000563842 RGS11O94810 467 aa10.74□□□□□ -0.69
CLK3-213ENST00000563842 OR2F2O95006 317 aa10.74□□□□□ -0.69
CLK3-213ENST00000563842 IGHV3-43DP0DP04 118 aa10.74□□□□□ -0.69
CLK3-213ENST00000563842 JUNBP17275 347 aaPredicted RBP10.74□□□□□ -0.69
CLK3-213ENST00000563842 HTD2P86397 168 aa10.74□□□□□ -0.69
CLK3-213ENST00000563842 ZNF816Q0VGE8 651 aaPredicted RBP10.74□□□□□ -0.69
CLK3-213ENST00000563842 UTF1Q5T230 341 aa10.74□□□□□ -0.69
CLK3-213ENST00000563842 HES5Q5TA89 166 aa10.74□□□□□ -0.69
CLK3-213ENST00000563842 C22orf42Q6IC83 251 aa10.74□□□□□ -0.69
CLK3-213ENST00000563842 Q6ZTK2 550 aa10.74□□□□□ -0.69
CLK3-213ENST00000563842 MOB1BQ7L9L4 216 aa10.74□□□□□ -0.69
CLK3-213ENST00000563842 Q8N2B8 174 aa10.74□□□□□ -0.69
CLK3-213ENST00000563842 UBALD1Q8TB05 177 aa10.74□□□□□ -0.69
CLK3-213ENST00000563842 GALMQ96C23 342 aa10.74□□□□□ -0.69
CLK3-213ENST00000563842 RBM14Q96PK6 669 aaKnown RBP10.74□□□□□ -0.69
CLK3-213ENST00000563842 SLC25A33Q9BSK2 321 aa10.74□□□□□ -0.69
CLK3-213ENST00000563842 KCNK15Q9H427 330 aa10.74□□□□□ -0.69
CLK3-213ENST00000563842 OR2S2Q9NQN1 319 aa10.74□□□□□ -0.69
CLK3-213ENST00000563842 JPT1Q9UK76 154 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms