RNA–Protein interactions for RNA: ENST00000563590.2

CCDC187-201, Transcript of coiled-coil domain containing 187, humanhuman

TSL 1 (best)

Gene CCDC187, Length 3,543 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187-201ENST00000563590 MPPED1O15442 326 aa11.01□□□□□ -0.65
CCDC187-201ENST00000563590 IGKV3-11P04433 115 aa11.01□□□□□ -0.65
CCDC187-201ENST00000563590 SERPINA7P05543 415 aa11.01□□□□□ -0.65
CCDC187-201ENST00000563590 CCL2P13500 99 aa11.01□□□□□ -0.65
CCDC187-201ENST00000563590 EFNA3P52797 238 aa11.01□□□□□ -0.65
CCDC187-201ENST00000563590 TGFBR3Q03167 851 aa11.01□□□□□ -0.65
CCDC187-201ENST00000563590 ZNF506Q5JVG8 444 aa11.01□□□□□ -0.65
CCDC187-201ENST00000563590 GUCD1Q96NT3 240 aa11.01□□□□□ -0.65
CCDC187-201ENST00000563590 NAGKQ9UJ70 344 aa11.01□□□□□ -0.65
CCDC187-201ENST00000563590 RNF24Q9Y225 148 aa11.01□□□□□ -0.65
CCDC187-201ENST00000563590 A0A1B0GX78 115 aa11□□□□□ -0.65
CCDC187-201ENST00000563590 CD300LBA8K4G0 201 aa11□□□□□ -0.65
CCDC187-201ENST00000563590 TSPAN2O60636 221 aa11□□□□□ -0.65
CCDC187-201ENST00000563590 GCGP01275 180 aa11□□□□□ -0.65
CCDC187-201ENST00000563590 ZNF17P17021 662 aa11□□□□□ -0.65
CCDC187-201ENST00000563590 GNB2P62879 340 aa11□□□□□ -0.65
CCDC187-201ENST00000563590 TRA2AQ13595 282 aaKnown RBP eCLIP11□□□□□ -0.65
CCDC187-201ENST00000563590 ENDOGQ14249 297 aaKnown RBP11□□□□□ -0.65
CCDC187-201ENST00000563590 PLCXD3Q63HM9 321 aa11□□□□□ -0.65
CCDC187-201ENST00000563590 C3orf80F5H4A9 247 aa11□□□□□ -0.65
CCDC187-201ENST00000563590 M0R135 149 aa11□□□□□ -0.65
CCDC187-201ENST00000563590 CRYAAP02489 173 aa11□□□□□ -0.65
CCDC187-201ENST00000563590 PSMB3P49720 205 aa11□□□□□ -0.65
CCDC187-201ENST00000563590 PTTG1IPP53801 180 aa11□□□□□ -0.65
CCDC187-201ENST00000563590 ERVFC1-1P60608 527 aa11□□□□□ -0.65
CCDC187-201ENST00000563590 COTL1Q14019 142 aa11□□□□□ -0.65
CCDC187-201ENST00000563590 GAPTQ8N292 157 aa11□□□□□ -0.65
CCDC187-201ENST00000563590 ZNF799Q96GE5 643 aa11□□□□□ -0.65
CCDC187-201ENST00000563590 ALKBH3Q96Q83 286 aaPredicted RBP11□□□□□ -0.65
CCDC187-201ENST00000563590 Q9N2K0 584 aa11□□□□□ -0.65
CCDC187-201ENST00000563590 SLC7A10Q9NS82 523 aa11□□□□□ -0.65
CCDC187-201ENST00000563590 FREM1Q5H8C1 2179 aa11□□□□□ -0.65
CCDC187-201ENST00000563590 CPAMD8Q8IZJ3 1885 aa11□□□□□ -0.65
CCDC187-201ENST00000563590 A0A096LPE4 126 aa11□□□□□ -0.65
CCDC187-201ENST00000563590 A0A1W2PPZ6 126 aa11□□□□□ -0.65
CCDC187-201ENST00000563590 ANKUB1A6NFN9 424 aa11□□□□□ -0.65
CCDC187-201ENST00000563590 DLEU1O43261 78 aa11□□□□□ -0.65
CCDC187-201ENST00000563590 IRF2P14316 349 aa11□□□□□ -0.65
CCDC187-201ENST00000563590 PNRC1Q12796 327 aaPredicted RBP11□□□□□ -0.65
CCDC187-201ENST00000563590 KCNIP4Q6PIL6 250 aa11□□□□□ -0.65
CCDC187-201ENST00000563590 ERASQ7Z444 233 aa11□□□□□ -0.65
CCDC187-201ENST00000563590 ATP5SQ99766 215 aa11□□□□□ -0.65
CCDC187-201ENST00000563590 VAMP8Q9BV40 100 aa11□□□□□ -0.65
CCDC187-201ENST00000563590 A0A1B0GU03 582 aa10.99□□□□□ -0.65
CCDC187-201ENST00000563590 LOC102723971A0A1B0GUV8 181 aa10.99□□□□□ -0.65
CCDC187-201ENST00000563590 B4DEV8 164 aa10.99□□□□□ -0.65
CCDC187-201ENST00000563590 PROB1E7EW31 1015 aa10.99□□□□□ -0.65
CCDC187-201ENST00000563590 PITX3O75364 302 aa10.99□□□□□ -0.65
CCDC187-201ENST00000563590 CLDN1O95832 211 aa10.99□□□□□ -0.65
CCDC187-201ENST00000563590 HPRT1P00492 218 aa10.99□□□□□ -0.65
CCDC187-201ENST00000563590 PPYP01298 95 aa10.99□□□□□ -0.65
CCDC187-201ENST00000563590 TNFSF10P50591 281 aa10.99□□□□□ -0.65
CCDC187-201ENST00000563590 THEM4Q5T1C6 240 aa10.99□□□□□ -0.65
CCDC187-201ENST00000563590 OIT3Q8WWZ8 545 aa10.99□□□□□ -0.65
CCDC187-201ENST00000563590 UCN2Q96RP3 112 aa10.99□□□□□ -0.65
CCDC187-201ENST00000563590 DIRC2Q96SL1 478 aa10.99□□□□□ -0.65
CCDC187-201ENST00000563590 TMEM204Q9BSN7 226 aa10.99□□□□□ -0.65
CCDC187-201ENST00000563590 FOXJ2Q9P0K8 574 aa10.99□□□□□ -0.65
CCDC187-201ENST00000563590 TMEM265A0A087WTH1 108 aa10.99□□□□□ -0.65
CCDC187-201ENST00000563590 HIST1H3AP68431 136 aa10.99□□□□□ -0.65
CCDC187-201ENST00000563590 ZXDAP98168 799 aa10.99□□□□□ -0.65
CCDC187-201ENST00000563590 TMEM256Q8N2U0 113 aa10.99□□□□□ -0.65
CCDC187-201ENST00000563590 ZDHHC11Q9H8X9 412 aa10.99□□□□□ -0.65
CCDC187-201ENST00000563590 CCL28Q9NRJ3 127 aa10.99□□□□□ -0.65
CCDC187-201ENST00000563590 RYDENQ9NUL5 291 aaKnown RBP10.99□□□□□ -0.65
CCDC187-201ENST00000563590 PIAS2O75928 621 aa10.98□□□□□ -0.65
CCDC187-201ENST00000563590 DEFA4P12838 97 aa10.98□□□□□ -0.65
CCDC187-201ENST00000563590 CCL4P13236 92 aa10.98□□□□□ -0.65
CCDC187-201ENST00000563590 MAS1LP35410 378 aa10.98□□□□□ -0.65
CCDC187-201ENST00000563590 CNN1P51911 297 aaKnown RBP10.98□□□□□ -0.65
CCDC187-201ENST00000563590 NUBP1P53384 320 aa10.98□□□□□ -0.65
CCDC187-201ENST00000563590 CCL7P80098 99 aa10.98□□□□□ -0.65
CCDC187-201ENST00000563590 RIMS4Q9H426 269 aaPredicted RBP10.98□□□□□ -0.65
CCDC187-201ENST00000563590 SMDT1Q9H4I9 107 aa10.98□□□□□ -0.65
CCDC187-201ENST00000563590 MUC3AQ02505 3323 aa10.98□□□□□ -0.65
CCDC187-201ENST00000563590 TRAV39A0A0B4J263 110 aa10.98□□□□□ -0.65
CCDC187-201ENST00000563590 A0A1W2PQD3 144 aa10.98□□□□□ -0.65
CCDC187-201ENST00000563590 E9PLN8 166 aa10.98□□□□□ -0.65
CCDC187-201ENST00000563590 LMO7DNF2Z398 122 aa10.98□□□□□ -0.65
CCDC187-201ENST00000563590 SELEP16581 610 aa10.98□□□□□ -0.65
CCDC187-201ENST00000563590 TRIM61Q5EBN2 209 aa10.98□□□□□ -0.65
CCDC187-201ENST00000563590 SLC25A26Q70HW3 274 aa10.98□□□□□ -0.65
CCDC187-201ENST00000563590 FAM89BQ8N5H3 189 aa10.98□□□□□ -0.65
CCDC187-201ENST00000563590 SRD5A3Q9H8P0 318 aa10.98□□□□□ -0.65
CCDC187-201ENST00000563590 MOB1AQ9H8S9 216 aa10.98□□□□□ -0.65
CCDC187-201ENST00000563590 DNAJC4Q9NNZ3 241 aa10.98□□□□□ -0.65
CCDC187-201ENST00000563590 OCIAD1Q9NX40 245 aa10.98□□□□□ -0.65
CCDC187-201ENST00000563590 PPP1R3CQ9UQK1 317 aa10.98□□□□□ -0.65
CCDC187-201ENST00000563590 HEATR1Q9H583 2144 aaKnown RBP10.98□□□□□ -0.65
CCDC187-201ENST00000563590 MKRN2OSH3BPM6 223 aa10.98□□□□□ -0.65
CCDC187-201ENST00000563590 GALNSP34059 522 aa10.98□□□□□ -0.65
CCDC187-201ENST00000563590 TDGF1P3P51864 188 aa10.98□□□□□ -0.65
CCDC187-201ENST00000563590 TAS2R30P59541 319 aa10.98□□□□□ -0.65
CCDC187-201ENST00000563590 LINC00696Q6ZRV3 163 aa10.98□□□□□ -0.65
CCDC187-201ENST00000563590 NAT8Q9UHE5 227 aa10.98□□□□□ -0.65
CCDC187-201ENST00000563590 NBEAQ8NFP9 2946 aa10.98□□□□□ -0.65
CCDC187-201ENST00000563590 TRDCB7Z8K6 153 aa10.97□□□□□ -0.65
CCDC187-201ENST00000563590 DHRS3O75911 302 aa10.97□□□□□ -0.65
CCDC187-201ENST00000563590 MCEMP1Q8IX19 187 aa10.97□□□□□ -0.65
CCDC187-201ENST00000563590 SLC25A45Q8N413 288 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms