RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 SUB1P53999 127 aaKnown RBP eCLIP6.54□□□□□ -1.36
TCF4-216ENST00000562680 PIGPP57054 158 aa6.54□□□□□ -1.36
TCF4-216ENST00000562680 FGF12P61328 243 aa6.54□□□□□ -1.36
TCF4-216ENST00000562680 TLE1Q04724 770 aa6.54□□□□□ -1.36
TCF4-216ENST00000562680 PRAMEF5Q5TYX0 476 aa6.54□□□□□ -1.36
TCF4-216ENST00000562680 PRAMEF6Q5VXH4 476 aa6.54□□□□□ -1.36
TCF4-216ENST00000562680 LRRTM1Q86UE6 522 aa6.54□□□□□ -1.36
TCF4-216ENST00000562680 BCL2L2Q92843 193 aaPredicted RBP6.54□□□□□ -1.36
TCF4-216ENST00000562680 C14orf144Q96I85 54 aa6.54□□□□□ -1.36
TCF4-216ENST00000562680 PTPRSQ13332 1948 aa6.54□□□□□ -1.36
TCF4-216ENST00000562680 AGPAT2O15120 278 aa6.53□□□□□ -1.36
TCF4-216ENST00000562680 RAMP1O60894 148 aa6.53□□□□□ -1.36
TCF4-216ENST00000562680 CTSDP07339 412 aaPredicted RBP6.53□□□□□ -1.36
TCF4-216ENST00000562680 SLC6A1P30531 599 aa6.53□□□□□ -1.36
TCF4-216ENST00000562680 SUMO1P63165 101 aaKnown RBP6.53□□□□□ -1.36
TCF4-216ENST00000562680 C6orf201Q7Z4U5 140 aa6.53□□□□□ -1.36
TCF4-216ENST00000562680 ZBTB34Q8NCN2 500 aa6.53□□□□□ -1.36
TCF4-216ENST00000562680 PRSS33Q8NF86 280 aa6.53□□□□□ -1.36
TCF4-216ENST00000562680 OR8G5Q8NG78 346 aa6.53□□□□□ -1.36
TCF4-216ENST00000562680 OR10W1Q8NGF6 305 aa6.53□□□□□ -1.36
TCF4-216ENST00000562680 OR13C8Q8NGS7 320 aa6.53□□□□□ -1.36
TCF4-216ENST00000562680 OR10X1Q8NGY0 326 aa6.53□□□□□ -1.36
TCF4-216ENST00000562680 OR51H1Q8NH63 302 aa6.53□□□□□ -1.36
TCF4-216ENST00000562680 DDOQ99489 341 aa6.53□□□□□ -1.36
TCF4-216ENST00000562680 TMED3Q9Y3Q3 217 aa6.53□□□□□ -1.36
TCF4-216ENST00000562680 ALPK3Q96L96 1907 aa6.53□□□□□ -1.36
TCF4-216ENST00000562680 C17orf112F2Z3M2 114 aa6.53□□□□□ -1.36
TCF4-216ENST00000562680 MC5RP33032 325 aa6.53□□□□□ -1.36
TCF4-216ENST00000562680 GFRA1P56159 465 aa6.53□□□□□ -1.36
TCF4-216ENST00000562680 RBM11P57052 281 aaKnown RBP6.53□□□□□ -1.36
TCF4-216ENST00000562680 TMEM30BQ3MIR4 351 aa6.53□□□□□ -1.36
TCF4-216ENST00000562680 DTX1Q86Y01 620 aa6.53□□□□□ -1.36
TCF4-216ENST00000562680 SPICQ8N5J4 248 aa6.53□□□□□ -1.36
TCF4-216ENST00000562680 SLC35G3Q8N808 338 aa6.53□□□□□ -1.36
TCF4-216ENST00000562680 PRR7Q8TB68 274 aa6.53□□□□□ -1.36
TCF4-216ENST00000562680 MRGPRDQ8TDS7 321 aa6.53□□□□□ -1.36
TCF4-216ENST00000562680 FAAP24Q9BTP7 215 aa6.53□□□□□ -1.36
TCF4-216ENST00000562680 PPP1R3EQ9H7J1 279 aa6.53□□□□□ -1.36
TCF4-216ENST00000562680 ZNF665Q9H7R5 613 aa6.53□□□□□ -1.36
TCF4-216ENST00000562680 ZDHHC11Q9H8X9 412 aa6.53□□□□□ -1.36
TCF4-216ENST00000562680 ZNF586Q9NXT0 402 aa6.53□□□□□ -1.36
TCF4-216ENST00000562680 TUBD1Q9UJT1 453 aa6.53□□□□□ -1.36
TCF4-216ENST00000562680 HSF4Q9ULV5 492 aa6.53□□□□□ -1.36
TCF4-216ENST00000562680 PCNX2A6NKB5 2137 aa6.53□□□□□ -1.36
TCF4-216ENST00000562680 FAM221AA4D161 298 aa6.53□□□□□ -1.36
TCF4-216ENST00000562680 OOEPA6NGQ2 149 aa6.53□□□□□ -1.36
TCF4-216ENST00000562680 TRDCB7Z8K6 153 aa6.53□□□□□ -1.36
TCF4-216ENST00000562680 AGFG2O95081 481 aa6.53□□□□□ -1.36
TCF4-216ENST00000562680 HAND1O96004 215 aa6.53□□□□□ -1.36
TCF4-216ENST00000562680 IGHG3P01860 377 aa6.53□□□□□ -1.36
TCF4-216ENST00000562680 GLRXP35754 106 aa6.53□□□□□ -1.36
TCF4-216ENST00000562680 AKR1C1Q04828 323 aa6.53□□□□□ -1.36
TCF4-216ENST00000562680 IL34Q6ZMJ4 242 aa6.53□□□□□ -1.36
TCF4-216ENST00000562680 Q6ZS92 163 aa6.53□□□□□ -1.36
TCF4-216ENST00000562680 RASL12Q9NYN1 266 aa6.53□□□□□ -1.36
TCF4-216ENST00000562680 SYNGR3O43761 229 aa6.53□□□□□ -1.36
TCF4-216ENST00000562680 OR7C2O60412 319 aa6.53□□□□□ -1.36
TCF4-216ENST00000562680 RAB5AP20339 215 aa6.53□□□□□ -1.36
TCF4-216ENST00000562680 PSMB6P28072 239 aa6.53□□□□□ -1.36
TCF4-216ENST00000562680 Q0VFX4 171 aa6.53□□□□□ -1.36
TCF4-216ENST00000562680 TESK1Q15569 626 aa6.53□□□□□ -1.36
TCF4-216ENST00000562680 MUC20Q8N307 709 aaPredicted RBP6.53□□□□□ -1.36
TCF4-216ENST00000562680 FAM212BQ9NTI7 297 aaPredicted RBP6.53□□□□□ -1.36
TCF4-216ENST00000562680 DOCK9Q9BZ29 2069 aa6.53□□□□□ -1.36
TCF4-216ENST00000562680 KIAA1549LQ6ZVL6 1849 aa6.53□□□□□ -1.36
TCF4-216ENST00000562680 HBE1P02100 147 aa6.53□□□□□ -1.36
TCF4-216ENST00000562680 AADACP22760 399 aa6.53□□□□□ -1.36
TCF4-216ENST00000562680 CCKARP32238 428 aa6.53□□□□□ -1.36
TCF4-216ENST00000562680 CDX1P47902 265 aaPredicted RBP6.53□□□□□ -1.36
TCF4-216ENST00000562680 BATF2Q8N1L9 274 aa6.53□□□□□ -1.36
TCF4-216ENST00000562680 BTF3L4Q96K17 158 aa6.53□□□□□ -1.36
TCF4-216ENST00000562680 RAB18Q9NP72 206 aa6.53□□□□□ -1.36
TCF4-216ENST00000562680 AMMECR1Q9Y4X0 333 aaPredicted RBP6.53□□□□□ -1.36
TCF4-216ENST00000562680 E5RGE8 158 aa6.52□□□□□ -1.37
TCF4-216ENST00000562680 UBE2CO00762 179 aa6.52□□□□□ -1.37
TCF4-216ENST00000562680 CDIPTO14735 213 aa6.52□□□□□ -1.37
TCF4-216ENST00000562680 CNIH1O95406 144 aa6.52□□□□□ -1.37
TCF4-216ENST00000562680 ADH4P08319 380 aa6.52□□□□□ -1.37
TCF4-216ENST00000562680 TIMP3P35625 211 aa6.52□□□□□ -1.37
TCF4-216ENST00000562680 HOGA1Q86XE5 327 aa6.52□□□□□ -1.37
TCF4-216ENST00000562680 OR4A4PQ8NGN8 299 aa6.52□□□□□ -1.37
TCF4-216ENST00000562680 SEC22AQ96IW7 307 aa6.52□□□□□ -1.37
TCF4-216ENST00000562680 AKR1E2Q96JD6 320 aa6.52□□□□□ -1.37
TCF4-216ENST00000562680 CNTNAP3Q9BZ76 1288 aa6.52□□□□□ -1.37
TCF4-216ENST00000562680 HEYLQ9NQ87 328 aaPredicted RBP6.52□□□□□ -1.37
TCF4-216ENST00000562680 NSG2Q9Y328 171 aa6.52□□□□□ -1.37
TCF4-216ENST00000562680 DNASE2O00115 360 aaPredicted RBP6.52□□□□□ -1.37
TCF4-216ENST00000562680 PIN1P1O15428 100 aa6.52□□□□□ -1.37
TCF4-216ENST00000562680 CLDN1O95832 211 aa6.52□□□□□ -1.37
TCF4-216ENST00000562680 HIST1H3AP68431 136 aa6.52□□□□□ -1.37
TCF4-216ENST00000562680 TMEM268Q5VZI3 342 aa6.52□□□□□ -1.37
TCF4-216ENST00000562680 GGNQ86UU5 652 aa6.52□□□□□ -1.37
TCF4-216ENST00000562680 C1QTNF5Q9BXJ0 243 aa6.52□□□□□ -1.37
TCF4-216ENST00000562680 SEC11CQ9BY50 192 aa6.52□□□□□ -1.37
TCF4-216ENST00000562680 RNF115Q9Y4L5 304 aa6.52□□□□□ -1.37
TCF4-216ENST00000562680 PYCARD-AS1I3L0S3 204 aa6.52□□□□□ -1.37
TCF4-216ENST00000562680 FAM3AP98173 230 aa6.52□□□□□ -1.37
TCF4-216ENST00000562680 IFITM3Q01628 133 aa6.52□□□□□ -1.37
TCF4-216ENST00000562680 PDLIM3Q53GG5 364 aaPredicted RBP6.52□□□□□ -1.37
TCF4-216ENST00000562680 ACOT7LQ6ZUV0 252 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms