RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 TMEM104Q8NE00 496 aa12.79□□□□□ -0.36
SNX1-213ENST00000561026 SETD9Q8NE22 299 aa12.79□□□□□ -0.36
SNX1-213ENST00000561026 OR2T10Q8NGZ9 312 aa12.79□□□□□ -0.36
SNX1-213ENST00000561026 RTN4IP1Q8WWV3 396 aaPredicted RBP12.79□□□□□ -0.36
SNX1-213ENST00000561026 MUL1Q969V5 352 aa12.79□□□□□ -0.36
SNX1-213ENST00000561026 IGHV3-43A0A0B4J1X8 118 aa12.78□□□□□ -0.36
SNX1-213ENST00000561026 A0A1W2PPK0 400 aa12.78□□□□□ -0.36
SNX1-213ENST00000561026 WI2-2373I1.2A0A1W2PRP0 233 aa12.78□□□□□ -0.36
SNX1-213ENST00000561026 C12orf77C9JDV5 145 aa12.78□□□□□ -0.36
SNX1-213ENST00000561026 IGHV3-43DP0DP04 118 aa12.78□□□□□ -0.36
SNX1-213ENST00000561026 IL3RAP26951 378 aa12.78□□□□□ -0.36
SNX1-213ENST00000561026 CD1BP29016 333 aa12.78□□□□□ -0.36
SNX1-213ENST00000561026 HOXD3P31249 432 aaPredicted RBP12.78□□□□□ -0.36
SNX1-213ENST00000561026 ADARB1P78563 741 aaKnown RBP12.78□□□□□ -0.36
SNX1-213ENST00000561026 SYT6Q5T7P8 510 aaPredicted RBP12.78□□□□□ -0.36
SNX1-213ENST00000561026 C8orf86Q6ZUL3 223 aa12.78□□□□□ -0.36
SNX1-213ENST00000561026 CDH26Q8IXH8 852 aa12.78□□□□□ -0.36
SNX1-213ENST00000561026 Q8N9W7 124 aa12.78□□□□□ -0.36
SNX1-213ENST00000561026 OR14A2Q96R54 314 aa12.78□□□□□ -0.36
SNX1-213ENST00000561026 GPR61Q9BZJ8 451 aa12.78□□□□□ -0.36
SNX1-213ENST00000561026 ABCG5Q9H222 651 aa12.78□□□□□ -0.36
SNX1-213ENST00000561026 C8orf4Q9NR00 106 aa12.78□□□□□ -0.36
SNX1-213ENST00000561026 PLSCR3Q9NRY6 295 aa12.78□□□□□ -0.36
SNX1-213ENST00000561026 LIN7CQ9NUP9 197 aaKnown RBP12.78□□□□□ -0.36
SNX1-213ENST00000561026 TRAPPC2LQ9UL33 140 aa12.78□□□□□ -0.36
SNX1-213ENST00000561026 NUDT19A8MXV4 375 aa12.77□□□□□ -0.37
SNX1-213ENST00000561026 AP4M1O00189 453 aa12.77□□□□□ -0.37
SNX1-213ENST00000561026 SPINT2O43291 252 aa12.77□□□□□ -0.37
SNX1-213ENST00000561026 MOSP00540 346 aa12.77□□□□□ -0.37
SNX1-213ENST00000561026 MYCNOSP40205 109 aa12.77□□□□□ -0.37
SNX1-213ENST00000561026 GPR12P47775 334 aa12.77□□□□□ -0.37
SNX1-213ENST00000561026 ZNF134P52741 427 aa12.77□□□□□ -0.37
SNX1-213ENST00000561026 TAS2R43P59537 309 aa12.77□□□□□ -0.37
SNX1-213ENST00000561026 DEFB121Q5J5C9 76 aa12.77□□□□□ -0.37
SNX1-213ENST00000561026 RAB12Q6IQ22 244 aa12.77□□□□□ -0.37
SNX1-213ENST00000561026 TEX38Q6PEX7 206 aa12.77□□□□□ -0.37
SNX1-213ENST00000561026 SLC25A48Q6ZT89 311 aaKnown RBP12.77□□□□□ -0.37
SNX1-213ENST00000561026 GAPTQ8N292 157 aa12.77□□□□□ -0.37
SNX1-213ENST00000561026 DHRSXQ8N5I4 330 aa12.77□□□□□ -0.37
SNX1-213ENST00000561026 PACRGLQ8N7B6 248 aa12.77□□□□□ -0.37
SNX1-213ENST00000561026 KLHL30-AS1Q8NEE0 82 aa12.77□□□□□ -0.37
SNX1-213ENST00000561026 OR4K15Q8NH41 348 aa12.77□□□□□ -0.37
SNX1-213ENST00000561026 P2RX4Q99571 388 aa12.77□□□□□ -0.37
SNX1-213ENST00000561026 RAB9BQ9NP90 201 aa12.77□□□□□ -0.37
SNX1-213ENST00000561026 ETAA1Q9NY74 926 aa12.77□□□□□ -0.37
SNX1-213ENST00000561026 GNG12Q9UBI6 72 aa12.77□□□□□ -0.37
SNX1-213ENST00000561026 COL7A1Q02388 2944 aa12.76□□□□□ -0.37
SNX1-213ENST00000561026 PNMA8CA0A1B0GUJ8 204 aa12.76□□□□□ -0.37
SNX1-213ENST00000561026 EFCAB10A6NFE3 127 aa12.76□□□□□ -0.37
SNX1-213ENST00000561026 ZNF736B4DX44 427 aaPredicted RBP12.76□□□□□ -0.37
SNX1-213ENST00000561026 SLC31A2O15432 143 aa12.76□□□□□ -0.37
SNX1-213ENST00000561026 MAS1P04201 325 aa12.76□□□□□ -0.37
SNX1-213ENST00000561026 ZNF137PP52743 207 aa12.76□□□□□ -0.37
SNX1-213ENST00000561026 PNLIPRP3Q17RR3 467 aa12.76□□□□□ -0.37
SNX1-213ENST00000561026 TMEM30BQ3MIR4 351 aa12.76□□□□□ -0.37
SNX1-213ENST00000561026 CT45A1Q5HYN5 189 aa12.76□□□□□ -0.37
SNX1-213ENST00000561026 C6orf183Q5T699 404 aa12.76□□□□□ -0.37
SNX1-213ENST00000561026 STEAP3Q658P3 488 aa12.76□□□□□ -0.37
SNX1-213ENST00000561026 AWAT2Q6E213 333 aa12.76□□□□□ -0.37
SNX1-213ENST00000561026 LYPD6Q86Y78 171 aa12.76□□□□□ -0.37
SNX1-213ENST00000561026 ZNF695Q8IW36 515 aa12.76□□□□□ -0.37
SNX1-213ENST00000561026 ZNF439Q8NDP4 499 aa12.76□□□□□ -0.37
SNX1-213ENST00000561026 CT45A3Q8NHU0 189 aa12.76□□□□□ -0.37
SNX1-213ENST00000561026 DPF1Q92782 380 aa12.76□□□□□ -0.37
SNX1-213ENST00000561026 DERL3Q96Q80 235 aa12.76□□□□□ -0.37
SNX1-213ENST00000561026 MCRIP2Q9BUT9 160 aaKnown RBP12.76□□□□□ -0.37
SNX1-213ENST00000561026 GON7Q9BXV9 100 aa12.76□□□□□ -0.37
SNX1-213ENST00000561026 BANF2Q9H503 90 aa12.76□□□□□ -0.37
SNX1-213ENST00000561026 PEX16Q9Y5Y5 336 aa12.76□□□□□ -0.37
SNX1-213ENST00000561026 FAM90A10PA6NDY2 464 aa12.75□□□□□ -0.37
SNX1-213ENST00000561026 FAM90A7PA6NKC0 464 aa12.75□□□□□ -0.37
SNX1-213ENST00000561026 FAM90A23PA8MXZ1 464 aa12.75□□□□□ -0.37
SNX1-213ENST00000561026 TXNL1O43396 289 aa12.75□□□□□ -0.37
SNX1-213ENST00000561026 CA11O75493 328 aa12.75□□□□□ -0.37
SNX1-213ENST00000561026 SC5DO75845 299 aa12.75□□□□□ -0.37
SNX1-213ENST00000561026 HBZP02008 142 aa12.75□□□□□ -0.37
SNX1-213ENST00000561026 MGMTP16455 207 aa12.75□□□□□ -0.37
SNX1-213ENST00000561026 RCC1P18754 421 aaPredicted RBP12.75□□□□□ -0.37
SNX1-213ENST00000561026 FUT3P21217 361 aa12.75□□□□□ -0.37
SNX1-213ENST00000561026 CAPGP40121 348 aa12.75□□□□□ -0.37
SNX1-213ENST00000561026 DOC2BQ14184 412 aa12.75□□□□□ -0.37
SNX1-213ENST00000561026 PRR18Q8N4B5 295 aa12.75□□□□□ -0.37
SNX1-213ENST00000561026 OR8H1Q8NGG4 311 aa12.75□□□□□ -0.37
SNX1-213ENST00000561026 OR10V1Q8NGI7 309 aa12.75□□□□□ -0.37
SNX1-213ENST00000561026 OR1L1Q8NH94 360 aa12.75□□□□□ -0.37
SNX1-213ENST00000561026 S1PR3Q99500 378 aa12.75□□□□□ -0.37
SNX1-213ENST00000561026 SELENOIQ9C0D9 397 aa12.75□□□□□ -0.37
SNX1-213ENST00000561026 CNOT2Q9NZN8 540 aaKnown RBP12.75□□□□□ -0.37
SNX1-213ENST00000561026 CD1AP06126 327 aa12.74□□□□□ -0.37
SNX1-213ENST00000561026 GLAP06280 429 aa12.74□□□□□ -0.37
SNX1-213ENST00000561026 GNAO1P09471 354 aa12.74□□□□□ -0.37
SNX1-213ENST00000561026 CELP19835 753 aa12.74□□□□□ -0.37
SNX1-213ENST00000561026 VHLP40337 213 aa12.74□□□□□ -0.37
SNX1-213ENST00000561026 SIGIRRQ6IA17 410 aa12.74□□□□□ -0.37
SNX1-213ENST00000561026 LAIR2Q6ISS4 152 aa12.74□□□□□ -0.37
SNX1-213ENST00000561026 TRAT1Q6PIZ9 186 aa12.74□□□□□ -0.37
SNX1-213ENST00000561026 RASL11BQ9BPW5 248 aa12.74□□□□□ -0.37
SNX1-213ENST00000561026 PSORS1C1Q9UIG5 152 aa12.74□□□□□ -0.37
SNX1-213ENST00000561026 CCL24O00175 119 aa12.73□□□□□ -0.37
SNX1-213ENST00000561026 CRTAPO75718 401 aaPredicted RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms