RNA–Protein interactions for RNA: ENST00000560959.5

TPM1-226, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-226ENST00000560959 PIGYQ3MUY2 71 aa14.29□□□□□ -0.12
TPM1-226ENST00000560959 SGPP2Q8IWX5 399 aa14.29□□□□□ -0.12
TPM1-226ENST00000560959 EME1Q96AY2 570 aa14.29□□□□□ -0.12
TPM1-226ENST00000560959 RAB9BQ9NP90 201 aa14.29□□□□□ -0.12
TPM1-226ENST00000560959 ERGIC3Q9Y282 383 aa14.29□□□□□ -0.12
TPM1-226ENST00000560959 G3V2T6 193 aa14.28□□□□□ -0.12
TPM1-226ENST00000560959 J3QRE1 110 aa14.28□□□□□ -0.12
TPM1-226ENST00000560959 ATP6V0E1O15342 81 aa14.28□□□□□ -0.12
TPM1-226ENST00000560959 LANCL1O43813 399 aa14.28□□□□□ -0.12
TPM1-226ENST00000560959 IFNA6P05013 189 aa14.28□□□□□ -0.12
TPM1-226ENST00000560959 SLC2A2P11168 524 aaPredicted RBP14.28□□□□□ -0.12
TPM1-226ENST00000560959 MYF6P23409 242 aa14.28□□□□□ -0.12
TPM1-226ENST00000560959 SLURP1P55000 103 aa14.28□□□□□ -0.12
TPM1-226ENST00000560959 ALKBH1Q13686 389 aaKnown RBP14.28□□□□□ -0.12
TPM1-226ENST00000560959 FLOT2Q14254 428 aa14.28□□□□□ -0.12
TPM1-226ENST00000560959 RSU1Q15404 277 aa14.28□□□□□ -0.12
TPM1-226ENST00000560959 MMDQ15546 238 aa14.28□□□□□ -0.12
TPM1-226ENST00000560959 LINC00596Q86U02 117 aa14.28□□□□□ -0.12
TPM1-226ENST00000560959 ZNF439Q8NDP4 499 aa14.28□□□□□ -0.12
TPM1-226ENST00000560959 ARPC1AQ92747 370 aa14.28□□□□□ -0.12
TPM1-226ENST00000560959 IGHV7-81A0A0B4J1V7 117 aa14.27□□□□□ -0.13
TPM1-226ENST00000560959 MAGEB3O15480 346 aa14.27□□□□□ -0.13
TPM1-226ENST00000560959 LGALS1P09382 135 aaKnown RBP14.27□□□□□ -0.13
TPM1-226ENST00000560959 ZNF134P52741 427 aa14.27□□□□□ -0.13
TPM1-226ENST00000560959 CRIP2P52943 208 aaPredicted RBP14.27□□□□□ -0.13
TPM1-226ENST00000560959 PITPNAQ00169 270 aa14.27□□□□□ -0.13
TPM1-226ENST00000560959 LSAMPQ13449 338 aa14.27□□□□□ -0.13
TPM1-226ENST00000560959 ZSCAN26Q16670 478 aa14.27□□□□□ -0.13
TPM1-226ENST00000560959 ZNF529Q6P280 563 aa14.27□□□□□ -0.13
TPM1-226ENST00000560959 TNFAIP8L1Q8WVP5 186 aa14.27□□□□□ -0.13
TPM1-226ENST00000560959 FLYWCH2Q96CP2 140 aaKnown RBP14.27□□□□□ -0.13
TPM1-226ENST00000560959 PELI1Q96FA3 418 aa14.27□□□□□ -0.13
TPM1-226ENST00000560959 ALX4Q9H161 411 aaPredicted RBP14.27□□□□□ -0.13
TPM1-226ENST00000560959 RIBC2Q9H4K1 309 aa14.27□□□□□ -0.13
TPM1-226ENST00000560959 ST3GAL6Q9Y274 331 aa14.27□□□□□ -0.13
TPM1-226ENST00000560959 PLECQ15149 4684 aaKnown RBP14.26□□□□□ -0.13
TPM1-226ENST00000560959 DAPL1A0PJW8 107 aa14.26□□□□□ -0.13
TPM1-226ENST00000560959 SLC31A2O15432 143 aa14.26□□□□□ -0.13
TPM1-226ENST00000560959 IGLV1-51P01701 117 aa14.26□□□□□ -0.13
TPM1-226ENST00000560959 MT-ND4P03905 459 aa14.26□□□□□ -0.13
TPM1-226ENST00000560959 HSPB1P04792 205 aaKnown RBP14.26□□□□□ -0.13
TPM1-226ENST00000560959 C19orf54Q5BKX5 351 aa14.26□□□□□ -0.13
TPM1-226ENST00000560959 CT45A1Q5HYN5 189 aa14.26□□□□□ -0.13
TPM1-226ENST00000560959 LIN54Q6MZP7 749 aa14.26□□□□□ -0.13
TPM1-226ENST00000560959 TCTEX1D1Q8N7M0 179 aa14.26□□□□□ -0.13
TPM1-226ENST00000560959 CT45A3Q8NHU0 189 aa14.26□□□□□ -0.13
TPM1-226ENST00000560959 MYCBPQ99417 103 aaPredicted RBP14.26□□□□□ -0.13
TPM1-226ENST00000560959 GPER1Q99527 375 aa14.26□□□□□ -0.13
TPM1-226ENST00000560959 ELOVL1Q9BW60 279 aa14.26□□□□□ -0.13
TPM1-226ENST00000560959 GABARAPL1Q9H0R8 117 aa14.26□□□□□ -0.13
TPM1-226ENST00000560959 PARP11Q9NR21 331 aa14.26□□□□□ -0.13
TPM1-226ENST00000560959 IL36GQ9NZH8 169 aa14.26□□□□□ -0.13
TPM1-226ENST00000560959 STUB1Q9UNE7 303 aa14.26□□□□□ -0.13
TPM1-226ENST00000560959 IGHV4OR15-8A0A075B7B6 117 aa14.25□□□□□ -0.13
TPM1-226ENST00000560959 A0A087WW49 117 aa14.25□□□□□ -0.13
TPM1-226ENST00000560959 IGHV3-43A0A0B4J1X8 118 aa14.25□□□□□ -0.13
TPM1-226ENST00000560959 GABRPO00591 440 aa14.25□□□□□ -0.13
TPM1-226ENST00000560959 OR7C1O76099 320 aaPredicted RBP14.25□□□□□ -0.13
TPM1-226ENST00000560959 IGHV3-43DP0DP04 118 aa14.25□□□□□ -0.13
TPM1-226ENST00000560959 RAB3AP20336 220 aa14.25□□□□□ -0.13
TPM1-226ENST00000560959 ACTBP60709 375 aa14.25□□□□□ -0.13
TPM1-226ENST00000560959 HAGHQ16775 308 aa14.25□□□□□ -0.13
TPM1-226ENST00000560959 ZNF497Q6ZNH5 498 aa14.25□□□□□ -0.13
TPM1-226ENST00000560959 ZDHHC13Q8IUH4 622 aa14.25□□□□□ -0.13
TPM1-226ENST00000560959 NPBQ8NG41 125 aa14.25□□□□□ -0.13
TPM1-226ENST00000560959 OR10K1Q8NGX5 313 aa14.25□□□□□ -0.13
TPM1-226ENST00000560959 TRUB1Q8WWH5 349 aaKnown RBP14.25□□□□□ -0.13
TPM1-226ENST00000560959 ZNF251Q9BRH9 671 aa14.25□□□□□ -0.13
TPM1-226ENST00000560959 CST11Q9H112 138 aa14.25□□□□□ -0.13
TPM1-226ENST00000560959 TMEM212A6NML5 194 aa14.24□□□□□ -0.13
TPM1-226ENST00000560959 J3QLW9 94 aa14.24□□□□□ -0.13
TPM1-226ENST00000560959 NBR2O15453 112 aa14.24□□□□□ -0.13
TPM1-226ENST00000560959 SPINT2O43291 252 aa14.24□□□□□ -0.13
TPM1-226ENST00000560959 HTR3BO95264 441 aa14.24□□□□□ -0.13
TPM1-226ENST00000560959 ZNF19P17023 458 aa14.24□□□□□ -0.13
TPM1-226ENST00000560959 RBM11P57052 281 aaKnown RBP14.24□□□□□ -0.13
TPM1-226ENST00000560959 C5orf64Q2M2E5 130 aa14.24□□□□□ -0.13
TPM1-226ENST00000560959 MPV17LQ2QL34 196 aa14.24□□□□□ -0.13
TPM1-226ENST00000560959 SLC25A30Q5SVS4 291 aa14.24□□□□□ -0.13
TPM1-226ENST00000560959 ZNF660Q6AZW8 331 aaPredicted RBP14.24□□□□□ -0.13
TPM1-226ENST00000560959 PYHIN1Q6K0P9 492 aa14.24□□□□□ -0.13
TPM1-226ENST00000560959 OR52N1Q8NH53 320 aa14.24□□□□□ -0.13
TPM1-226ENST00000560959 MRPL48Q96GC5 212 aaKnown RBP14.24□□□□□ -0.13
TPM1-226ENST00000560959 JAM3Q9BX67 310 aa14.24□□□□□ -0.13
TPM1-226ENST00000560959 ANKRD60Q9BZ19 345 aa14.24□□□□□ -0.13
TPM1-226ENST00000560959 METTL9Q9H1A3 318 aa14.24□□□□□ -0.13
TPM1-226ENST00000560959 ZNF581Q9P0T4 197 aa14.24□□□□□ -0.13
TPM1-226ENST00000560959 GNG12Q9UBI6 72 aa14.24□□□□□ -0.13
TPM1-226ENST00000560959 DHDHQ9UQ10 334 aa14.24□□□□□ -0.13
TPM1-226ENST00000560959 CSTBP04080 98 aaKnown RBP14.23□□□□□ -0.13
TPM1-226ENST00000560959 BLVRBP30043 206 aaPredicted RBP14.23□□□□□ -0.13
TPM1-226ENST00000560959 POLR2IP36954 125 aaKnown RBP14.23□□□□□ -0.13
TPM1-226ENST00000560959 RAB40BQ12829 278 aa14.23□□□□□ -0.13
TPM1-226ENST00000560959 ATP6AP1Q15904 470 aa14.23□□□□□ -0.13
TPM1-226ENST00000560959 SATL1Q86VE3 508 aa14.23□□□□□ -0.13
TPM1-226ENST00000560959 STX19Q8N4C7 294 aa14.23□□□□□ -0.13
TPM1-226ENST00000560959 ACBD7Q8N6N7 88 aa14.23□□□□□ -0.13
TPM1-226ENST00000560959 UBALD1Q8TB05 177 aa14.23□□□□□ -0.13
TPM1-226ENST00000560959 CCDC107Q8WV48 283 aa14.23□□□□□ -0.13
TPM1-226ENST00000560959 C4orf36Q96KX1 117 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms