RNA–Protein interactions for RNA: ENST00000560927.1

CRTC3-210, Transcript of CREB regulated transcription coactivator 3, humanhuman

TSL 2

Gene CRTC3, Length 2,463 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-210ENST00000560927 PAX9P55771 341 aa12.38□□□□□ -0.43
CRTC3-210ENST00000560927 P4HA3Q7Z4N8 544 aa12.38□□□□□ -0.43
CRTC3-210ENST00000560927 COMMD1Q8N668 190 aa12.38□□□□□ -0.43
CRTC3-210ENST00000560927 TMEM178AQ8NBL3 297 aa12.38□□□□□ -0.43
CRTC3-210ENST00000560927 GPR146Q96CH1 333 aa12.38□□□□□ -0.43
CRTC3-210ENST00000560927 GMPPAQ96IJ6 420 aaPredicted RBP12.38□□□□□ -0.43
CRTC3-210ENST00000560927 COLCA2A8K830 154 aa12.37□□□□□ -0.43
CRTC3-210ENST00000560927 ZNF806P0C7X5 589 aa12.37□□□□□ -0.43
CRTC3-210ENST00000560927 ERVK11-1P61568 191 aa12.37□□□□□ -0.43
CRTC3-210ENST00000560927 CCL20P78556 96 aa12.37□□□□□ -0.43
CRTC3-210ENST00000560927 HOXA4Q00056 320 aaPredicted RBP12.37□□□□□ -0.43
CRTC3-210ENST00000560927 ZNF154Q13106 437 aa12.37□□□□□ -0.43
CRTC3-210ENST00000560927 TESK1Q15569 626 aa12.37□□□□□ -0.43
CRTC3-210ENST00000560927 IL22RA2Q969J5 263 aa12.37□□□□□ -0.43
CRTC3-210ENST00000560927 ABHD14BQ96IU4 210 aa12.37□□□□□ -0.43
CRTC3-210ENST00000560927 SLC25A31Q9H0C2 315 aa12.37□□□□□ -0.43
CRTC3-210ENST00000560927 LRP5LA4QPB2 252 aa12.37□□□□□ -0.43
CRTC3-210ENST00000560927 H0YL77 283 aa12.37□□□□□ -0.43
CRTC3-210ENST00000560927 H3BP45 60 aa12.37□□□□□ -0.43
CRTC3-210ENST00000560927 NKX2-8O15522 239 aa12.37□□□□□ -0.43
CRTC3-210ENST00000560927 IGKV1-39P01597 117 aa12.37□□□□□ -0.43
CRTC3-210ENST00000560927 IGKV1D-39P04432 117 aa12.37□□□□□ -0.43
CRTC3-210ENST00000560927 RUNX1Q01196 453 aa12.37□□□□□ -0.43
CRTC3-210ENST00000560927 Q6ZRM9 215 aa12.37□□□□□ -0.43
CRTC3-210ENST00000560927 ZNF295-AS1Q8N0V1 137 aa12.37□□□□□ -0.43
CRTC3-210ENST00000560927 OR10V1Q8NGI7 309 aa12.37□□□□□ -0.43
CRTC3-210ENST00000560927 SLC25A40Q8TBP6 338 aa12.37□□□□□ -0.43
CRTC3-210ENST00000560927 CLCC1Q96S66 551 aa12.37□□□□□ -0.43
CRTC3-210ENST00000560927 C20orf24Q9BUV8 137 aa12.37□□□□□ -0.43
CRTC3-210ENST00000560927 ZNF175Q9Y473 711 aa12.37□□□□□ -0.43
CRTC3-210ENST00000560927 CEBPDP49716 269 aaPredicted RBP12.36□□□□□ -0.43
CRTC3-210ENST00000560927 SOX8P57073 446 aa12.36□□□□□ -0.43
CRTC3-210ENST00000560927 UBE2NP61088 152 aaKnown RBP12.36□□□□□ -0.43
CRTC3-210ENST00000560927 TRIP6Q15654 476 aaKnown RBP12.36□□□□□ -0.43
CRTC3-210ENST00000560927 AWAT1Q58HT5 328 aa12.36□□□□□ -0.43
CRTC3-210ENST00000560927 ZNF497Q6ZNH5 498 aa12.36□□□□□ -0.43
CRTC3-210ENST00000560927 RARRES2Q99969 163 aa12.36□□□□□ -0.43
CRTC3-210ENST00000560927 CDH20Q9HBT6 801 aa12.36□□□□□ -0.43
CRTC3-210ENST00000560927 RPS10P5Q9NQ39 176 aa12.36□□□□□ -0.43
CRTC3-210ENST00000560927 TRAPPC2LQ9UL33 140 aa12.36□□□□□ -0.43
CRTC3-210ENST00000560927 PPP1R3CQ9UQK1 317 aa12.36□□□□□ -0.43
CRTC3-210ENST00000560927 KIAA1324LA8MWY0 1029 aaPredicted RBP12.36□□□□□ -0.43
CRTC3-210ENST00000560927 WRBO00258 174 aa12.36□□□□□ -0.43
CRTC3-210ENST00000560927 SERPINE2P07093 398 aa12.36□□□□□ -0.43
CRTC3-210ENST00000560927 ZFP82Q8N141 532 aa12.36□□□□□ -0.43
CRTC3-210ENST00000560927 C2CD4CQ8TF44 421 aa12.36□□□□□ -0.43
CRTC3-210ENST00000560927 CLCF1Q9UBD9 225 aa12.36□□□□□ -0.43
CRTC3-210ENST00000560927 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.35□□□□□ -0.43
CRTC3-210ENST00000560927 GRPP07492 148 aa12.35□□□□□ -0.43
CRTC3-210ENST00000560927 SNRNP70P08621 437 aaKnown RBP12.35□□□□□ -0.43
CRTC3-210ENST00000560927 PGA5P0DJD9 388 aa12.35□□□□□ -0.43
CRTC3-210ENST00000560927 MPV17P39210 176 aa12.35□□□□□ -0.43
CRTC3-210ENST00000560927 RAB13P51153 203 aa12.35□□□□□ -0.43
CRTC3-210ENST00000560927 PSG7Q13046 419 aa12.35□□□□□ -0.43
CRTC3-210ENST00000560927 OR1J1Q8NGS3 322 aa12.35□□□□□ -0.43
CRTC3-210ENST00000560927 C14orf79Q96F83 325 aa12.35□□□□□ -0.43
CRTC3-210ENST00000560927 TRIB1Q96RU8 372 aa12.35□□□□□ -0.43
CRTC3-210ENST00000560927 SMCO4Q9NRQ5 59 aa12.35□□□□□ -0.43
CRTC3-210ENST00000560927 NPIPB11E5RHQ5 1161 aa12.35□□□□□ -0.43
CRTC3-210ENST00000560927 NXPH2O95156 264 aa12.35□□□□□ -0.43
CRTC3-210ENST00000560927 DAOP14920 347 aa12.35□□□□□ -0.43
CRTC3-210ENST00000560927 S100GP29377 79 aa12.35□□□□□ -0.43
CRTC3-210ENST00000560927 CCL11P51671 97 aa12.35□□□□□ -0.43
CRTC3-210ENST00000560927 HMGN3Q15651 99 aa12.35□□□□□ -0.43
CRTC3-210ENST00000560927 AVPI1Q5T686 147 aa12.35□□□□□ -0.43
CRTC3-210ENST00000560927 FDCSPQ8NFU4 85 aa12.35□□□□□ -0.43
CRTC3-210ENST00000560927 DSPP15924 2871 aaKnown RBP12.34□□□□□ -0.43
CRTC3-210ENST00000560927 C7orf77A4D0Y5 90 aa12.34□□□□□ -0.43
CRTC3-210ENST00000560927 UMAD1C9J7I0 102 aa12.34□□□□□ -0.43
CRTC3-210ENST00000560927 HSPA12AO43301 675 aa12.34□□□□□ -0.43
CRTC3-210ENST00000560927 OR13C7P0DN81 318 aa12.34□□□□□ -0.43
CRTC3-210ENST00000560927 TGFBR3Q03167 851 aa12.34□□□□□ -0.43
CRTC3-210ENST00000560927 MRPL49Q13405 166 aaKnown RBP12.34□□□□□ -0.43
CRTC3-210ENST00000560927 GABRA6Q16445 453 aa12.34□□□□□ -0.43
CRTC3-210ENST00000560927 SPSB3Q6PJ21 355 aa12.34□□□□□ -0.43
CRTC3-210ENST00000560927 CXorf67Q86X51 503 aaPredicted RBP12.34□□□□□ -0.43
CRTC3-210ENST00000560927 IQCF2Q8IXL9 164 aa12.34□□□□□ -0.43
CRTC3-210ENST00000560927 POLDIP2Q9Y2S7 368 aa12.34□□□□□ -0.43
CRTC3-210ENST00000560927 J3QW42 95 aa12.34□□□□□ -0.43
CRTC3-210ENST00000560927 M0R036 132 aa12.34□□□□□ -0.43
CRTC3-210ENST00000560927 AGFG2O95081 481 aa12.34□□□□□ -0.43
CRTC3-210ENST00000560927 MMP9P14780 707 aa12.34□□□□□ -0.43
CRTC3-210ENST00000560927 MDH2P40926 338 aaKnown RBP12.34□□□□□ -0.43
CRTC3-210ENST00000560927 BAXQ07812 192 aa12.34□□□□□ -0.43
CRTC3-210ENST00000560927 TMEM267Q0VDI3 215 aaPredicted RBP12.34□□□□□ -0.43
CRTC3-210ENST00000560927 ZNF146Q15072 292 aa12.34□□□□□ -0.43
CRTC3-210ENST00000560927 CNEP1R1Q8N9A8 125 aa12.34□□□□□ -0.43
CRTC3-210ENST00000560927 RNASE11Q8TAA1 199 aaKnown RBP12.34□□□□□ -0.43
CRTC3-210ENST00000560927 ISOC2Q96AB3 205 aa12.34□□□□□ -0.43
CRTC3-210ENST00000560927 PBDC1Q9BVG4 233 aa12.34□□□□□ -0.43
CRTC3-210ENST00000560927 SLC35B3Q9H1N7 401 aa12.34□□□□□ -0.43
CRTC3-210ENST00000560927 ESRP2Q9H6T0 727 aaKnown RBP12.34□□□□□ -0.43
CRTC3-210ENST00000560927 TREM2Q9NZC2 230 aa12.34□□□□□ -0.43
CRTC3-210ENST00000560927 CACNG5Q9UF02 275 aa12.34□□□□□ -0.43
CRTC3-210ENST00000560927 OR14J1Q9UGF5 321 aa12.34□□□□□ -0.43
CRTC3-210ENST00000560927 TINAGQ9UJW2 476 aa12.34□□□□□ -0.43
CRTC3-210ENST00000560927 KCNS2Q9ULS6 477 aa12.34□□□□□ -0.43
CRTC3-210ENST00000560927 PRR14LQ5THK1 2151 aa12.33□□□□□ -0.44
CRTC3-210ENST00000560927 A0A1B0GU03 582 aa12.33□□□□□ -0.44
CRTC3-210ENST00000560927 PSPNO60542 156 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms