RNA–Protein interactions for RNA: ENST00000560871.5

RABGGTA-219, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 886 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-219ENST00000560871 OR52M1Q8NGK5 317 aa12.53□□□□□ -0.4
RABGGTA-219ENST00000560871 UBALD1Q8TB05 177 aa12.53□□□□□ -0.4
RABGGTA-219ENST00000560871 ARL11Q969Q4 196 aa12.53□□□□□ -0.4
RABGGTA-219ENST00000560871 MALSU1Q96EH3 234 aa12.53□□□□□ -0.4
RABGGTA-219ENST00000560871 ARHGAP5-AS1Q96IT6 56 aa12.53□□□□□ -0.4
RABGGTA-219ENST00000560871 PECRQ9BY49 303 aa12.53□□□□□ -0.4
RABGGTA-219ENST00000560871 DPAGT1Q9H3H5 408 aa12.53□□□□□ -0.4
RABGGTA-219ENST00000560871 TNFRSF19Q9NS68 423 aa12.53□□□□□ -0.4
RABGGTA-219ENST00000560871 PLEKHJ1Q9NW61 149 aa12.53□□□□□ -0.4
RABGGTA-219ENST00000560871 VPREB3Q9UKI3 123 aa12.53□□□□□ -0.4
RABGGTA-219ENST00000560871 VGLL3A8MV65 326 aa12.52□□□□□ -0.41
RABGGTA-219ENST00000560871 RAB27BO00194 218 aa12.52□□□□□ -0.41
RABGGTA-219ENST00000560871 ALDH3B2P48448 385 aa12.52□□□□□ -0.41
RABGGTA-219ENST00000560871 LOXL3P58215 753 aa12.52□□□□□ -0.41
RABGGTA-219ENST00000560871 HMGN3Q15651 99 aa12.52□□□□□ -0.41
RABGGTA-219ENST00000560871 LTC4SQ16873 150 aa12.52□□□□□ -0.41
RABGGTA-219ENST00000560871 LRRC75BQ2VPJ9 315 aa12.52□□□□□ -0.41
RABGGTA-219ENST00000560871 C16orf87Q6PH81 154 aa12.52□□□□□ -0.41
RABGGTA-219ENST00000560871 TRAT1Q6PIZ9 186 aa12.52□□□□□ -0.41
RABGGTA-219ENST00000560871 SLC16A12Q6ZSM3 486 aa12.52□□□□□ -0.41
RABGGTA-219ENST00000560871 OR5R1Q8NH85 324 aa12.52□□□□□ -0.41
RABGGTA-219ENST00000560871 OR9G1Q8NH87 305 aa12.52□□□□□ -0.41
RABGGTA-219ENST00000560871 LGALS14Q8TCE9 139 aa12.52□□□□□ -0.41
RABGGTA-219ENST00000560871 PIFOQ8TCI5 191 aa12.52□□□□□ -0.41
RABGGTA-219ENST00000560871 MMP28Q9H239 520 aa12.52□□□□□ -0.41
RABGGTA-219ENST00000560871 GFOD1Q9NXC2 390 aa12.52□□□□□ -0.41
RABGGTA-219ENST00000560871 AK3Q9UIJ7 227 aa12.52□□□□□ -0.41
RABGGTA-219ENST00000560871 PSG11Q9UQ72 335 aa12.52□□□□□ -0.41
RABGGTA-219ENST00000560871 TRBV6-6A0A0A6YYG2 114 aa12.51□□□□□ -0.41
RABGGTA-219ENST00000560871 H3BUX3 64 aa12.51□□□□□ -0.41
RABGGTA-219ENST00000560871 J3QR06 171 aa12.51□□□□□ -0.41
RABGGTA-219ENST00000560871 MFNGO00587 321 aa12.51□□□□□ -0.41
RABGGTA-219ENST00000560871 HBZP02008 142 aa12.51□□□□□ -0.41
RABGGTA-219ENST00000560871 TFAP2AP05549 437 aa12.51□□□□□ -0.41
RABGGTA-219ENST00000560871 SNRPBP14678 240 aaKnown RBP12.51□□□□□ -0.41
RABGGTA-219ENST00000560871 HTR1DP28221 377 aa12.51□□□□□ -0.41
RABGGTA-219ENST00000560871 SCAND1P57086 179 aa12.51□□□□□ -0.41
RABGGTA-219ENST00000560871 LSM3P62310 102 aaKnown RBP12.51□□□□□ -0.41
RABGGTA-219ENST00000560871 SSX2Q16385 188 aa12.51□□□□□ -0.41
RABGGTA-219ENST00000560871 TMEM30BQ3MIR4 351 aa12.51□□□□□ -0.41
RABGGTA-219ENST00000560871 FAM53AQ6NSI3 398 aaPredicted RBP12.51□□□□□ -0.41
RABGGTA-219ENST00000560871 Q6ZTK2 550 aa12.51□□□□□ -0.41
RABGGTA-219ENST00000560871 C5orf24Q7Z6I8 188 aa12.51□□□□□ -0.41
RABGGTA-219ENST00000560871 OR1L1Q8NH94 360 aa12.51□□□□□ -0.41
RABGGTA-219ENST00000560871 NDNFQ8TB73 568 aa12.51□□□□□ -0.41
RABGGTA-219ENST00000560871 LEAP2Q969E1 77 aa12.51□□□□□ -0.41
RABGGTA-219ENST00000560871 SSX3Q99909 188 aa12.51□□□□□ -0.41
RABGGTA-219ENST00000560871 HDHD3Q9BSH5 251 aaPredicted RBP12.51□□□□□ -0.41
RABGGTA-219ENST00000560871 ZNF747Q9BV97 191 aa12.51□□□□□ -0.41
RABGGTA-219ENST00000560871 TAF9BQ9HBM6 251 aa12.51□□□□□ -0.41
RABGGTA-219ENST00000560871 KCNK7Q9Y2U2 307 aa12.51□□□□□ -0.41
RABGGTA-219ENST00000560871 IGHV3-43A0A0B4J1X8 118 aa12.5□□□□□ -0.41
RABGGTA-219ENST00000560871 FAM181BA6NEQ2 426 aa12.5□□□□□ -0.41
RABGGTA-219ENST00000560871 LY6LH3BQJ8 138 aa12.5□□□□□ -0.41
RABGGTA-219ENST00000560871 BUB1B-PAK6H3BSN5 160 aa12.5□□□□□ -0.41
RABGGTA-219ENST00000560871 SDCBPO00560 298 aaPredicted RBP12.5□□□□□ -0.41
RABGGTA-219ENST00000560871 TOR1AO14656 332 aa12.5□□□□□ -0.41
RABGGTA-219ENST00000560871 SPINT2O43291 252 aa12.5□□□□□ -0.41
RABGGTA-219ENST00000560871 GPR137BO60478 399 aa12.5□□□□□ -0.41
RABGGTA-219ENST00000560871 GABARAPO95166 117 aa12.5□□□□□ -0.41
RABGGTA-219ENST00000560871 IGHV3-7P01780 117 aa12.5□□□□□ -0.41
RABGGTA-219ENST00000560871 IGHV3-43DP0DP04 118 aa12.5□□□□□ -0.41
RABGGTA-219ENST00000560871 GNG10P50151 68 aa12.5□□□□□ -0.41
RABGGTA-219ENST00000560871 RPL15P61313 204 aaKnown RBP12.5□□□□□ -0.41
RABGGTA-219ENST00000560871 NCS1P62166 190 aa12.5□□□□□ -0.41
RABGGTA-219ENST00000560871 FAM189A2Q15884 450 aa12.5□□□□□ -0.41
RABGGTA-219ENST00000560871 Q3ZCU0 254 aa12.5□□□□□ -0.41
RABGGTA-219ENST00000560871 OLFML2AQ68BL7 652 aa12.5□□□□□ -0.41
RABGGTA-219ENST00000560871 ZNF439Q8NDP4 499 aa12.5□□□□□ -0.41
RABGGTA-219ENST00000560871 OR10R2Q8NGX6 335 aa12.5□□□□□ -0.41
RABGGTA-219ENST00000560871 TAF15Q92804 592 aaKnown RBP eCLIP12.5□□□□□ -0.41
RABGGTA-219ENST00000560871 RIMS4Q9H426 269 aaPredicted RBP12.5□□□□□ -0.41
RABGGTA-219ENST00000560871 RAB9BQ9NP90 201 aa12.5□□□□□ -0.41
RABGGTA-219ENST00000560871 C12orf4Q9NQ89 552 aa12.5□□□□□ -0.41
RABGGTA-219ENST00000560871 DPM3Q9P2X0 92 aa12.5□□□□□ -0.41
RABGGTA-219ENST00000560871 BTBD17A6NE02 478 aa12.49□□□□□ -0.41
RABGGTA-219ENST00000560871 TMEM127O75204 238 aa12.49□□□□□ -0.41
RABGGTA-219ENST00000560871 HIST1H1DP16402 221 aaKnown RBP12.49□□□□□ -0.41
RABGGTA-219ENST00000560871 RPS19P39019 145 aaKnown RBP12.49□□□□□ -0.41
RABGGTA-219ENST00000560871 DYNLT3P51808 116 aa12.49□□□□□ -0.41
RABGGTA-219ENST00000560871 RELBQ01201 579 aa12.49□□□□□ -0.41
RABGGTA-219ENST00000560871 PLA1AQ53H76 456 aa12.49□□□□□ -0.41
RABGGTA-219ENST00000560871 MOB1BQ7L9L4 216 aa12.49□□□□□ -0.41
RABGGTA-219ENST00000560871 ANKRD13BQ86YJ7 626 aa12.49□□□□□ -0.41
RABGGTA-219ENST00000560871 PRR18Q8N4B5 295 aa12.49□□□□□ -0.41
RABGGTA-219ENST00000560871 LINC00311Q8N616 119 aa12.49□□□□□ -0.41
RABGGTA-219ENST00000560871 C8orf31Q8N9H6 132 aa12.49□□□□□ -0.41
RABGGTA-219ENST00000560871 OR5H6Q8NGV6 325 aa12.49□□□□□ -0.41
RABGGTA-219ENST00000560871 SLC25A38Q96DW6 304 aa12.49□□□□□ -0.41
RABGGTA-219ENST00000560871 RAB3CQ96E17 227 aa12.49□□□□□ -0.41
RABGGTA-219ENST00000560871 NAA50Q9GZZ1 169 aaKnown RBP12.49□□□□□ -0.41
RABGGTA-219ENST00000560871 HILPDAQ9Y5L2 63 aa12.49□□□□□ -0.41
RABGGTA-219ENST00000560871 ETV7Q9Y603 341 aa12.49□□□□□ -0.41
RABGGTA-219ENST00000560871 METTL21EPA6NDL7 271 aa12.48□□□□□ -0.41
RABGGTA-219ENST00000560871 LEUTXA8MZ59 168 aa12.48□□□□□ -0.41
RABGGTA-219ENST00000560871 GNB3P16520 340 aa12.48□□□□□ -0.41
RABGGTA-219ENST00000560871 PRRX1P54821 245 aa12.48□□□□□ -0.41
RABGGTA-219ENST00000560871 HLA-DRB3P79483 266 aa12.48□□□□□ -0.41
RABGGTA-219ENST00000560871 GNMTQ14749 295 aa12.48□□□□□ -0.41
RABGGTA-219ENST00000560871 KIAA2026Q5HYC2 2103 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms