RNA–Protein interactions for RNA: ENST00000560521.5

RABGGTA-217, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 680 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-217ENST00000560521 ZNF581Q9P0T4 197 aa6.79□□□□□ -1.32
RABGGTA-217ENST00000560521 RRP15Q9Y3B9 282 aaKnown RBP6.79□□□□□ -1.32
RABGGTA-217ENST00000560521 NUBP2Q9Y5Y2 271 aa6.79□□□□□ -1.32
RABGGTA-217ENST00000560521 ARPC1BO15143 372 aaKnown RBP6.78□□□□□ -1.32
RABGGTA-217ENST00000560521 CST1P01037 141 aa6.78□□□□□ -1.32
RABGGTA-217ENST00000560521 MT-ND2P03891 347 aa6.78□□□□□ -1.32
RABGGTA-217ENST00000560521 UBCP0CG48 685 aaKnown RBP6.78□□□□□ -1.32
RABGGTA-217ENST00000560521 EGR2P11161 476 aaPredicted RBP6.78□□□□□ -1.32
RABGGTA-217ENST00000560521 KCNJ3P48549 501 aa6.78□□□□□ -1.32
RABGGTA-217ENST00000560521 CRIP2P52943 208 aaPredicted RBP6.78□□□□□ -1.32
RABGGTA-217ENST00000560521 CRISP1P54107 249 aa6.78□□□□□ -1.32
RABGGTA-217ENST00000560521 EFNB1P98172 346 aa6.78□□□□□ -1.32
RABGGTA-217ENST00000560521 LRRC36Q1X8D7 754 aa6.78□□□□□ -1.32
RABGGTA-217ENST00000560521 C5orf64Q2M2E5 130 aa6.78□□□□□ -1.32
RABGGTA-217ENST00000560521 FAM98BQ52LJ0 330 aaKnown RBP6.78□□□□□ -1.32
RABGGTA-217ENST00000560521 CT45A1Q5HYN5 189 aa6.78□□□□□ -1.32
RABGGTA-217ENST00000560521 AADACL4Q5VUY2 407 aa6.78□□□□□ -1.32
RABGGTA-217ENST00000560521 DEFB107AQ8IZN7 70 aa6.78□□□□□ -1.32
RABGGTA-217ENST00000560521 OR13C9Q8NGT0 318 aa6.78□□□□□ -1.32
RABGGTA-217ENST00000560521 OR10AC1Q8NH08 325 aa6.78□□□□□ -1.32
RABGGTA-217ENST00000560521 CT45A3Q8NHU0 189 aa6.78□□□□□ -1.32
RABGGTA-217ENST00000560521 UTP4Q969X6 686 aaKnown RBP6.78□□□□□ -1.32
RABGGTA-217ENST00000560521 TMEM106AQ96A25 262 aa6.78□□□□□ -1.32
RABGGTA-217ENST00000560521 MS4A10Q96PG2 267 aa6.78□□□□□ -1.32
RABGGTA-217ENST00000560521 TEX12Q9BXU0 123 aa6.78□□□□□ -1.32
RABGGTA-217ENST00000560521 H2AFY2Q9P0M6 372 aaPredicted RBP6.78□□□□□ -1.32
RABGGTA-217ENST00000560521 FOXA2Q9Y261 457 aaPredicted RBP6.78□□□□□ -1.32
RABGGTA-217ENST00000560521 A0A1W2PQL4 384 aaPredicted RBP6.77□□□□□ -1.33
RABGGTA-217ENST00000560521 M0R129 80 aa6.77□□□□□ -1.33
RABGGTA-217ENST00000560521 NBR2O15453 112 aa6.77□□□□□ -1.33
RABGGTA-217ENST00000560521 SULT1C4O75897 302 aa6.77□□□□□ -1.33
RABGGTA-217ENST00000560521 CSN3P07498 182 aa6.77□□□□□ -1.33
RABGGTA-217ENST00000560521 OCM2P0CE71 109 aa6.77□□□□□ -1.33
RABGGTA-217ENST00000560521 OCMP0CE72 109 aaPredicted RBP6.77□□□□□ -1.33
RABGGTA-217ENST00000560521 TMEM225BP0DP42 221 aa6.77□□□□□ -1.33
RABGGTA-217ENST00000560521 DBTP11182 482 aaKnown RBP6.77□□□□□ -1.33
RABGGTA-217ENST00000560521 ZNF20P17024 532 aa6.77□□□□□ -1.33
RABGGTA-217ENST00000560521 MECP2P51608 486 aaKnown RBP6.77□□□□□ -1.33
RABGGTA-217ENST00000560521 MS4A2Q01362 244 aa6.77□□□□□ -1.33
RABGGTA-217ENST00000560521 EWSR1Q01844 656 aaKnown RBP eCLIP6.77□□□□□ -1.33
RABGGTA-217ENST00000560521 PMS2P11Q13670 270 aa6.77□□□□□ -1.33
RABGGTA-217ENST00000560521 KLF5Q13887 457 aaPredicted RBP6.77□□□□□ -1.33
RABGGTA-217ENST00000560521 IL13RA2Q14627 380 aa6.77□□□□□ -1.33
RABGGTA-217ENST00000560521 PTGES3Q15185 160 aaKnown RBP6.77□□□□□ -1.33
RABGGTA-217ENST00000560521 Q3ZCU0 254 aa6.77□□□□□ -1.33
RABGGTA-217ENST00000560521 SPATS1Q496A3 300 aa6.77□□□□□ -1.33
RABGGTA-217ENST00000560521 LCE2DQ5TA82 110 aaPredicted RBP6.77□□□□□ -1.33
RABGGTA-217ENST00000560521 TMEM244Q5VVB8 128 aa6.77□□□□□ -1.33
RABGGTA-217ENST00000560521 NXNL2Q5VZ03 156 aa6.77□□□□□ -1.33
RABGGTA-217ENST00000560521 ZNF660Q6AZW8 331 aaPredicted RBP6.77□□□□□ -1.33
RABGGTA-217ENST00000560521 FAHD1Q6P587 224 aa6.77□□□□□ -1.33
RABGGTA-217ENST00000560521 TCEANCQ8N8B7 351 aa6.77□□□□□ -1.33
RABGGTA-217ENST00000560521 SUMF2Q8NBJ7 301 aa6.77□□□□□ -1.33
RABGGTA-217ENST00000560521 NPBQ8NG41 125 aa6.77□□□□□ -1.33
RABGGTA-217ENST00000560521 OR51A4Q8NGJ6 313 aa6.77□□□□□ -1.33
RABGGTA-217ENST00000560521 OR9G4Q8NGQ1 327 aa6.77□□□□□ -1.33
RABGGTA-217ENST00000560521 CCDC107Q8WV48 283 aa6.77□□□□□ -1.33
RABGGTA-217ENST00000560521 ELAC2Q9BQ52 826 aaKnown RBP6.77□□□□□ -1.33
RABGGTA-217ENST00000560521 ZNF251Q9BRH9 671 aa6.77□□□□□ -1.33
RABGGTA-217ENST00000560521 DPCDQ9BVM2 203 aaPredicted RBP6.77□□□□□ -1.33
RABGGTA-217ENST00000560521 ZNF556Q9HAH1 456 aa6.77□□□□□ -1.33
RABGGTA-217ENST00000560521 RANGRFQ9HD47 186 aaPredicted RBP6.77□□□□□ -1.33
RABGGTA-217ENST00000560521 NDE1Q9NXR1 346 aa6.77□□□□□ -1.33
RABGGTA-217ENST00000560521 ADAM30Q9UKF2 790 aa6.77□□□□□ -1.33
RABGGTA-217ENST00000560521 ERGIC3Q9Y282 383 aa6.77□□□□□ -1.33
RABGGTA-217ENST00000560521 PKHD1P08F94 4074 aa6.76□□□□□ -1.33
RABGGTA-217ENST00000560521 CXorf65A6NEN9 183 aa6.76□□□□□ -1.33
RABGGTA-217ENST00000560521 NUPR2A6NF83 97 aa6.76□□□□□ -1.33
RABGGTA-217ENST00000560521 FCN1O00602 326 aa6.76□□□□□ -1.33
RABGGTA-217ENST00000560521 LANCL1O43813 399 aa6.76□□□□□ -1.33
RABGGTA-217ENST00000560521 ORC5O43913 435 aa6.76□□□□□ -1.33
RABGGTA-217ENST00000560521 NDUFA3O95167 84 aa6.76□□□□□ -1.33
RABGGTA-217ENST00000560521 CNIH1O95406 144 aa6.76□□□□□ -1.33
RABGGTA-217ENST00000560521 ISG15P05161 165 aa6.76□□□□□ -1.33
RABGGTA-217ENST00000560521 OR2T7P0C7T2 308 aa6.76□□□□□ -1.33
RABGGTA-217ENST00000560521 RAP2AP10114 183 aa6.76□□□□□ -1.33
RABGGTA-217ENST00000560521 ANXA8P13928 327 aa6.76□□□□□ -1.33
RABGGTA-217ENST00000560521 CALB2P22676 271 aa6.76□□□□□ -1.33
RABGGTA-217ENST00000560521 TPPP2P59282 170 aa6.76□□□□□ -1.33
RABGGTA-217ENST00000560521 CD81P60033 236 aa6.76□□□□□ -1.33
RABGGTA-217ENST00000560521 NANOS3P60323 173 aaKnown RBP6.76□□□□□ -1.33
RABGGTA-217ENST00000560521 RIPK1Q13546 671 aa6.76□□□□□ -1.33
RABGGTA-217ENST00000560521 KISS1Q15726 138 aa6.76□□□□□ -1.33
RABGGTA-217ENST00000560521 PIGYQ3MUY2 71 aa6.76□□□□□ -1.33
RABGGTA-217ENST00000560521 TP53I3Q53FA7 332 aa6.76□□□□□ -1.33
RABGGTA-217ENST00000560521 LCN12Q6JVE5 192 aa6.76□□□□□ -1.33
RABGGTA-217ENST00000560521 PYHIN1Q6K0P9 492 aa6.76□□□□□ -1.33
RABGGTA-217ENST00000560521 CEMP1Q6PRD7 247 aaPredicted RBP6.76□□□□□ -1.33
RABGGTA-217ENST00000560521 CD200R1LQ6Q8B3 271 aa6.76□□□□□ -1.33
RABGGTA-217ENST00000560521 DHFR2Q86XF0 187 aa6.76□□□□□ -1.33
RABGGTA-217ENST00000560521 Q8N402 240 aa6.76□□□□□ -1.33
RABGGTA-217ENST00000560521 DEFB125Q8N687 156 aa6.76□□□□□ -1.33
RABGGTA-217ENST00000560521 TCTEX1D1Q8N7M0 179 aa6.76□□□□□ -1.33
RABGGTA-217ENST00000560521 OR2G2Q8NGZ5 317 aa6.76□□□□□ -1.33
RABGGTA-217ENST00000560521 OVOL2Q9BRP0 275 aa6.76□□□□□ -1.33
RABGGTA-217ENST00000560521 CST11Q9H112 138 aa6.76□□□□□ -1.33
RABGGTA-217ENST00000560521 WFDC10AQ9H1F0 79 aa6.76□□□□□ -1.33
RABGGTA-217ENST00000560521 CNOT2Q9NZN8 540 aaKnown RBP6.76□□□□□ -1.33
RABGGTA-217ENST00000560521 FRRS1LQ9P0K9 344 aa6.76□□□□□ -1.33
RABGGTA-217ENST00000560521 A3GALT2U3KPV4 340 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms