RNA–Protein interactions for RNA: ENST00000560297.5

USP8-209, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 5

Gene USP8, Length 652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-209ENST00000560297 HMGN3Q15651 99 aa10.04□□□□□ -0.8
USP8-209ENST00000560297 GPR157Q5UAW9 335 aa10.04□□□□□ -0.8
USP8-209ENST00000560297 DTX3Q8N9I9 347 aa10.04□□□□□ -0.8
USP8-209ENST00000560297 CYYR1Q96J86 154 aa10.04□□□□□ -0.8
USP8-209ENST00000560297 ST6GALNAC5Q9BVH7 336 aa10.04□□□□□ -0.8
USP8-209ENST00000560297 BEX2Q9BXY8 128 aa10.04□□□□□ -0.8
USP8-209ENST00000560297 TMEM133Q9H2Q1 129 aa10.04□□□□□ -0.8
USP8-209ENST00000560297 SCPEP1Q9HB40 452 aa10.04□□□□□ -0.8
USP8-209ENST00000560297 SIRT7Q9NRC8 400 aa10.04□□□□□ -0.8
USP8-209ENST00000560297 ELF5Q9UKW6 265 aaPredicted RBP10.04□□□□□ -0.8
USP8-209ENST00000560297 ZANQ9Y493 2812 aa10.04□□□□□ -0.8
USP8-209ENST00000560297 ABCA2Q9BZC7 2435 aa10.04□□□□□ -0.8
USP8-209ENST00000560297 A0A087X0M5 115 aa10.03□□□□□ -0.8
USP8-209ENST00000560297 CENPVL3A0A0U1RRI6 287 aa10.03□□□□□ -0.8
USP8-209ENST00000560297 A0A1B0GX30 115 aa10.03□□□□□ -0.8
USP8-209ENST00000560297 FABP12A6NFH5 140 aa10.03□□□□□ -0.8
USP8-209ENST00000560297 F2RL2O00254 374 aa10.03□□□□□ -0.8
USP8-209ENST00000560297 OMGP23515 440 aa10.03□□□□□ -0.8
USP8-209ENST00000560297 CD34P28906 385 aa10.03□□□□□ -0.8
USP8-209ENST00000560297 SRP14P37108 136 aaKnown RBP10.03□□□□□ -0.8
USP8-209ENST00000560297 MRPS10P82664 201 aaKnown RBP10.03□□□□□ -0.8
USP8-209ENST00000560297 SCGB2A2Q13296 93 aa10.03□□□□□ -0.8
USP8-209ENST00000560297 CNPY1Q3B7I2 92 aa10.03□□□□□ -0.8
USP8-209ENST00000560297 Q3ZCU0 254 aa10.03□□□□□ -0.8
USP8-209ENST00000560297 PRAMEF5Q5TYX0 476 aa10.03□□□□□ -0.8
USP8-209ENST00000560297 STEAP3Q658P3 488 aa10.03□□□□□ -0.8
USP8-209ENST00000560297 PYHIN1Q6K0P9 492 aa10.03□□□□□ -0.8
USP8-209ENST00000560297 Q71RC1 249 aaPredicted RBP10.03□□□□□ -0.8
USP8-209ENST00000560297 ABHD12Q8N2K0 398 aa10.03□□□□□ -0.8
USP8-209ENST00000560297 PRR18Q8N4B5 295 aa10.03□□□□□ -0.8
USP8-209ENST00000560297 NUDCD2Q8WVJ2 157 aa10.03□□□□□ -0.8
USP8-209ENST00000560297 LHX4Q969G2 390 aa10.03□□□□□ -0.8
USP8-209ENST00000560297 KIRREL1Q96J84 757 aa10.03□□□□□ -0.8
USP8-209ENST00000560297 ZNF286AQ9HBT8 521 aa10.03□□□□□ -0.8
USP8-209ENST00000560297 NUP50Q9UKX7 468 aa10.03□□□□□ -0.8
USP8-209ENST00000560297 IGHV1-69DA0A0B4J2H0 117 aa10.02□□□□□ -0.81
USP8-209ENST00000560297 RNASEK-C17orf49H0YIS7 233 aa10.02□□□□□ -0.81
USP8-209ENST00000560297 SDCBPO00560 298 aaPredicted RBP10.02□□□□□ -0.81
USP8-209ENST00000560297 SSX5O60225 188 aa10.02□□□□□ -0.81
USP8-209ENST00000560297 MMP23AO75900 390 aa10.02□□□□□ -0.81
USP8-209ENST00000560297 DIRAS3O95661 229 aa10.02□□□□□ -0.81
USP8-209ENST00000560297 FSHBP01225 129 aa10.02□□□□□ -0.81
USP8-209ENST00000560297 IGHV1-69P01742 117 aa10.02□□□□□ -0.81
USP8-209ENST00000560297 LPLP06858 475 aa10.02□□□□□ -0.81
USP8-209ENST00000560297 CTXN2P0C2S0 81 aa10.02□□□□□ -0.81
USP8-209ENST00000560297 HOXB4P17483 251 aaPredicted RBP10.02□□□□□ -0.81
USP8-209ENST00000560297 NFYBP25208 207 aa10.02□□□□□ -0.81
USP8-209ENST00000560297 PTBP1P26599 531 aaKnown RBP eCLIP10.02□□□□□ -0.81
USP8-209ENST00000560297 PRRX1P54821 245 aa10.02□□□□□ -0.81
USP8-209ENST00000560297 LOXL3P58215 753 aa10.02□□□□□ -0.81
USP8-209ENST00000560297 HLA-DRB3P79483 266 aa10.02□□□□□ -0.81
USP8-209ENST00000560297 KLF17Q5JT82 389 aaPredicted RBP10.02□□□□□ -0.81
USP8-209ENST00000560297 ZNF782Q6ZMW2 699 aaPredicted RBP10.02□□□□□ -0.81
USP8-209ENST00000560297 Q6ZPA2 131 aa10.02□□□□□ -0.81
USP8-209ENST00000560297 LINC00299Q6ZSB3 139 aa10.02□□□□□ -0.81
USP8-209ENST00000560297 HOGA1Q86XE5 327 aa10.02□□□□□ -0.81
USP8-209ENST00000560297 SNX29P2Q8IUI4 249 aa10.02□□□□□ -0.81
USP8-209ENST00000560297 OR11H6Q8NGC7 330 aa10.02□□□□□ -0.81
USP8-209ENST00000560297 OR4A4PQ8NGN8 299 aa10.02□□□□□ -0.81
USP8-209ENST00000560297 OR6Q1Q8NGQ2 317 aa10.02□□□□□ -0.81
USP8-209ENST00000560297 OR1L1Q8NH94 360 aa10.02□□□□□ -0.81
USP8-209ENST00000560297 GPX8Q8TED1 209 aa10.02□□□□□ -0.81
USP8-209ENST00000560297 ZDHHC16Q969W1 377 aa10.02□□□□□ -0.81
USP8-209ENST00000560297 ABHD1Q96SE0 405 aa10.02□□□□□ -0.81
USP8-209ENST00000560297 SOSTQ9BQB4 213 aa10.02□□□□□ -0.81
USP8-209ENST00000560297 SUCNR1Q9BXA5 334 aa10.02□□□□□ -0.81
USP8-209ENST00000560297 CLEC7AQ9BXN2 247 aa10.02□□□□□ -0.81
USP8-209ENST00000560297 OR2S2Q9NQN1 319 aa10.02□□□□□ -0.81
USP8-209ENST00000560297 GFOD1Q9NXC2 390 aa10.02□□□□□ -0.81
USP8-209ENST00000560297 ZNF230Q9UIE0 474 aaPredicted RBP10.02□□□□□ -0.81
USP8-209ENST00000560297 TLN2Q9Y4G6 2542 aa10.02□□□□□ -0.81
USP8-209ENST00000560297 IGHV2-26A0A0B4J1V2 119 aa10.01□□□□□ -0.81
USP8-209ENST00000560297 TRAV40A0A0B4J280 105 aa10.01□□□□□ -0.81
USP8-209ENST00000560297 TOR1AO14656 332 aa10.01□□□□□ -0.81
USP8-209ENST00000560297 CTDSPLO15194 276 aa10.01□□□□□ -0.81
USP8-209ENST00000560297 FABP7O15540 132 aa10.01□□□□□ -0.81
USP8-209ENST00000560297 YPEL1O60688 119 aa10.01□□□□□ -0.81
USP8-209ENST00000560297 RGS11O94810 467 aa10.01□□□□□ -0.81
USP8-209ENST00000560297 SCTP09683 121 aa10.01□□□□□ -0.81
USP8-209ENST00000560297 PTHLHP12272 177 aa10.01□□□□□ -0.81
USP8-209ENST00000560297 GDNFP39905 211 aa10.01□□□□□ -0.81
USP8-209ENST00000560297 ETV6P41212 452 aa10.01□□□□□ -0.81
USP8-209ENST00000560297 IL18Q14116 193 aa10.01□□□□□ -0.81
USP8-209ENST00000560297 LTC4SQ16873 150 aa10.01□□□□□ -0.81
USP8-209ENST00000560297 CHRFAM7AQ494W8 412 aa10.01□□□□□ -0.81
USP8-209ENST00000560297 MIDNQ504T8 468 aa10.01□□□□□ -0.81
USP8-209ENST00000560297 SPANXN2Q5MJ10 180 aa10.01□□□□□ -0.81
USP8-209ENST00000560297 LY6G6FQ5SQ64 297 aa10.01□□□□□ -0.81
USP8-209ENST00000560297 HCP5Q6MZN7 132 aa10.01□□□□□ -0.81
USP8-209ENST00000560297 CCDC190Q86UF4 302 aa10.01□□□□□ -0.81
USP8-209ENST00000560297 PNKDQ8N490 385 aa10.01□□□□□ -0.81
USP8-209ENST00000560297 C8orf31Q8N9H6 132 aa10.01□□□□□ -0.81
USP8-209ENST00000560297 BEST4Q8NFU0 473 aa10.01□□□□□ -0.81
USP8-209ENST00000560297 OR9G1Q8NH87 305 aa10.01□□□□□ -0.81
USP8-209ENST00000560297 ZNF596Q8TC21 504 aa10.01□□□□□ -0.81
USP8-209ENST00000560297 FCAMRQ8WWV6 532 aa10.01□□□□□ -0.81
USP8-209ENST00000560297 IL1F10Q8WWZ1 152 aa10.01□□□□□ -0.81
USP8-209ENST00000560297 YPEL2Q96QA6 119 aa10.01□□□□□ -0.81
USP8-209ENST00000560297 MS4A7Q9GZW8 240 aaPredicted RBP10.01□□□□□ -0.81
USP8-209ENST00000560297 IFT46Q9NQC8 304 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms