RNA–Protein interactions for RNA: ENST00000559996.1

HERC1-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-206ENST00000559996 RAB39BQ96DA2 213 aa7.69□□□□□ -1.18
HERC1-206ENST00000559996 MSI2Q96DH6 328 aaKnown RBP7.69□□□□□ -1.18
HERC1-206ENST00000559996 CABLES2Q9BTV7 478 aa7.69□□□□□ -1.18
HERC1-206ENST00000559996 CCDC32Q9BV29 185 aa7.69□□□□□ -1.18
HERC1-206ENST00000559996 SIRPDQ9H106 197 aa7.69□□□□□ -1.18
HERC1-206ENST00000559996 OR6C3Q9NZP0 311 aa7.69□□□□□ -1.18
HERC1-206ENST00000559996 ZNF107Q9UII5 783 aaPredicted RBP7.69□□□□□ -1.18
HERC1-206ENST00000559996 ANXA10Q9UJ72 324 aa7.69□□□□□ -1.18
HERC1-206ENST00000559996 TRAPPC2LQ9UL33 140 aa7.69□□□□□ -1.18
HERC1-206ENST00000559996 TBC1D24Q9ULP9 559 aa7.69□□□□□ -1.18
HERC1-206ENST00000559996 UBE2J1Q9Y385 318 aaPredicted RBP7.69□□□□□ -1.18
HERC1-206ENST00000559996 FLNBO75369 2602 aaKnown RBP7.69□□□□□ -1.18
HERC1-206ENST00000559996 CCDC168Q8NDH2 2452 aa7.69□□□□□ -1.18
HERC1-206ENST00000559996 SVEP1Q4LDE5 3571 aa7.68□□□□□ -1.18
HERC1-206ENST00000559996 TRBV6-7A0A0A0MS04 114 aa7.68□□□□□ -1.18
HERC1-206ENST00000559996 IGHV2-70DA0A0C4DH43 119 aa7.68□□□□□ -1.18
HERC1-206ENST00000559996 A0A1W2PQ09 198 aa7.68□□□□□ -1.18
HERC1-206ENST00000559996 FUOMA2VDF0 154 aa7.68□□□□□ -1.18
HERC1-206ENST00000559996 ZNF729A6NN14 1252 aaPredicted RBP7.68□□□□□ -1.18
HERC1-206ENST00000559996 FOXH1O75593 365 aa7.68□□□□□ -1.18
HERC1-206ENST00000559996 UPK1BO75841 260 aa7.68□□□□□ -1.18
HERC1-206ENST00000559996 ZNF728P0DKX0 622 aa7.68□□□□□ -1.18
HERC1-206ENST00000559996 OMGP23515 440 aa7.68□□□□□ -1.18
HERC1-206ENST00000559996 HLA-DMAP28067 261 aa7.68□□□□□ -1.18
HERC1-206ENST00000559996 BTCP35070 178 aa7.68□□□□□ -1.18
HERC1-206ENST00000559996 RCVRNP35243 200 aa7.68□□□□□ -1.18
HERC1-206ENST00000559996 RFX2P48378 723 aa7.68□□□□□ -1.18
HERC1-206ENST00000559996 ZNF134P52741 427 aa7.68□□□□□ -1.18
HERC1-206ENST00000559996 HLA-DRB3P79483 266 aa7.68□□□□□ -1.18
HERC1-206ENST00000559996 TMEM249Q2WGJ8 235 aa7.68□□□□□ -1.18
HERC1-206ENST00000559996 CD276Q5ZPR3 534 aa7.68□□□□□ -1.18
HERC1-206ENST00000559996 STEAP3Q658P3 488 aa7.68□□□□□ -1.18
HERC1-206ENST00000559996 DHRS11Q6UWP2 260 aa7.68□□□□□ -1.18
HERC1-206ENST00000559996 C1orf122Q6ZSJ8 110 aa7.68□□□□□ -1.18
HERC1-206ENST00000559996 ZNF565Q8N9K5 539 aa7.68□□□□□ -1.18
HERC1-206ENST00000559996 OR5AP2Q8NGF4 316 aa7.68□□□□□ -1.18
HERC1-206ENST00000559996 ARL11Q969Q4 196 aa7.68□□□□□ -1.18
HERC1-206ENST00000559996 MRGPRFQ96AM1 343 aa7.68□□□□□ -1.18
HERC1-206ENST00000559996 KIRREL1Q96J84 757 aa7.68□□□□□ -1.18
HERC1-206ENST00000559996 TINAGL1Q9GZM7 467 aaPredicted RBP7.68□□□□□ -1.18
HERC1-206ENST00000559996 CHMP1AQ9HD42 196 aaPredicted RBP7.68□□□□□ -1.18
HERC1-206ENST00000559996 CALYQ9NYX4 217 aa7.68□□□□□ -1.18
HERC1-206ENST00000559996 ITGB1BP2Q9UKP3 347 aa7.68□□□□□ -1.18
HERC1-206ENST00000559996 INSIG2Q9Y5U4 225 aa7.68□□□□□ -1.18
HERC1-206ENST00000559996 TRGV10A0A0A0MS01 117 aa7.67□□□□□ -1.18
HERC1-206ENST00000559996 SDCBPO00560 298 aaPredicted RBP7.67□□□□□ -1.18
HERC1-206ENST00000559996 FABP7O15540 132 aa7.67□□□□□ -1.18
HERC1-206ENST00000559996 TUSC2O75896 110 aa7.67□□□□□ -1.18
HERC1-206ENST00000559996 PMP2P02689 132 aa7.67□□□□□ -1.18
HERC1-206ENST00000559996 LIPFP07098 398 aa7.67□□□□□ -1.18
HERC1-206ENST00000559996 MSMBP08118 114 aa7.67□□□□□ -1.18
HERC1-206ENST00000559996 HRH1P35367 487 aa7.67□□□□□ -1.18
HERC1-206ENST00000559996 GLP1RP43220 463 aa7.67□□□□□ -1.18
HERC1-206ENST00000559996 ARF6P62330 175 aa7.67□□□□□ -1.18
HERC1-206ENST00000559996 HTD2P86397 168 aa7.67□□□□□ -1.18
HERC1-206ENST00000559996 DYRK1AQ13627 763 aa7.67□□□□□ -1.18
HERC1-206ENST00000559996 MORN2Q502X0 79 aa7.67□□□□□ -1.18
HERC1-206ENST00000559996 FAAP20Q6NZ36 180 aa7.67□□□□□ -1.18
HERC1-206ENST00000559996 HEPN1Q6WQI6 88 aa7.67□□□□□ -1.18
HERC1-206ENST00000559996 C1orf229Q6ZS94 237 aaPredicted RBP7.67□□□□□ -1.18
HERC1-206ENST00000559996 MOB1BQ7L9L4 216 aa7.67□□□□□ -1.18
HERC1-206ENST00000559996 FAM185AQ8N0U4 392 aa7.67□□□□□ -1.18
HERC1-206ENST00000559996 ZNF439Q8NDP4 499 aa7.67□□□□□ -1.18
HERC1-206ENST00000559996 OR52L2PQ8NGH6 319 aa7.67□□□□□ -1.18
HERC1-206ENST00000559996 OR4A4PQ8NGN8 299 aa7.67□□□□□ -1.18
HERC1-206ENST00000559996 SETD6Q8TBK2 473 aa7.67□□□□□ -1.18
HERC1-206ENST00000559996 ZNF714Q96N38 554 aa7.67□□□□□ -1.18
HERC1-206ENST00000559996 SLC6A7Q99884 636 aa7.67□□□□□ -1.18
HERC1-206ENST00000559996 PARP12Q9H0J9 701 aaKnown RBP7.67□□□□□ -1.18
HERC1-206ENST00000559996 UNKLQ9H9P5 680 aaKnown RBP7.67□□□□□ -1.18
HERC1-206ENST00000559996 ZNF286AQ9HBT8 521 aa7.67□□□□□ -1.18
HERC1-206ENST00000559996 LPAR2Q9HBW0 351 aa7.67□□□□□ -1.18
HERC1-206ENST00000559996 HRASLSQ9HDD0 168 aa7.67□□□□□ -1.18
HERC1-206ENST00000559996 IDI2-AS1Q9NZ38 188 aa7.67□□□□□ -1.18
HERC1-206ENST00000559996 OR1A1Q9P1Q5 309 aa7.67□□□□□ -1.18
HERC1-206ENST00000559996 LPAR3Q9UBY5 353 aa7.67□□□□□ -1.18
HERC1-206ENST00000559996 MGAT4AQ9UM21 535 aa7.67□□□□□ -1.18
HERC1-206ENST00000559996 NOTCH2Q04721 2471 aa7.67□□□□□ -1.18
HERC1-206ENST00000559996 MYO9AB2RTY4 2548 aa7.67□□□□□ -1.18
HERC1-206ENST00000559996 A0A087X0M5 115 aa7.66□□□□□ -1.18
HERC1-206ENST00000559996 IGHV3-43A0A0B4J1X8 118 aa7.66□□□□□ -1.18
HERC1-206ENST00000559996 A0A1B0GX30 115 aa7.66□□□□□ -1.18
HERC1-206ENST00000559996 B4DSR2 109 aa7.66□□□□□ -1.18
HERC1-206ENST00000559996 M0QYG6 137 aa7.66□□□□□ -1.18
HERC1-206ENST00000559996 M0R1W7 72 aa7.66□□□□□ -1.18
HERC1-206ENST00000559996 PROP1O75360 226 aa7.66□□□□□ -1.18
HERC1-206ENST00000559996 DIRAS3O95661 229 aa7.66□□□□□ -1.18
HERC1-206ENST00000559996 IGHV1-8P0DP01 117 aa7.66□□□□□ -1.18
HERC1-206ENST00000559996 IGHV3-43DP0DP04 118 aa7.66□□□□□ -1.18
HERC1-206ENST00000559996 DVL1P1P54792 670 aaPredicted RBP7.66□□□□□ -1.18
HERC1-206ENST00000559996 ACTBP60709 375 aa7.66□□□□□ -1.18
HERC1-206ENST00000559996 ACTG1P63261 375 aa7.66□□□□□ -1.18
HERC1-206ENST00000559996 MRPS15P82914 257 aaKnown RBP7.66□□□□□ -1.18
HERC1-206ENST00000559996 PRB3Q04118 309 aaPredicted RBP7.66□□□□□ -1.18
HERC1-206ENST00000559996 GNMTQ14749 295 aa7.66□□□□□ -1.18
HERC1-206ENST00000559996 CDK10Q15131 360 aa7.66□□□□□ -1.18
HERC1-206ENST00000559996 LY6G6FQ5SQ64 297 aa7.66□□□□□ -1.18
HERC1-206ENST00000559996 VAX1Q5SQQ9 334 aa7.66□□□□□ -1.18
HERC1-206ENST00000559996 LDLRAD2Q5SZI1 272 aa7.66□□□□□ -1.18
HERC1-206ENST00000559996 C6orf183Q5T699 404 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms