RNA–Protein interactions for RNA: ENST00000559989.1

CSPG4P12-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 12, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P12, Length 7,790 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P12-202ENST00000559989 SMIM14Q96QK8 99 aa12.22□□□□□ -0.45
CSPG4P12-202ENST00000559989 ABLIM3O94929 683 aa12.21□□□□□ -0.45
CSPG4P12-202ENST00000559989 DDTP30046 118 aa12.21□□□□□ -0.45
CSPG4P12-202ENST00000559989 RFLNAQ6ZTI6 216 aa12.21□□□□□ -0.45
CSPG4P12-202ENST00000559989 RHOVQ96L33 236 aa12.21□□□□□ -0.45
CSPG4P12-202ENST00000559989 SSBP4Q9BWG4 385 aaPredicted RBP12.21□□□□□ -0.45
CSPG4P12-202ENST00000559989 IGHV3OR16-12A0A075B7B8 117 aa12.21□□□□□ -0.45
CSPG4P12-202ENST00000559989 IGHV3-13P01766 116 aa12.21□□□□□ -0.45
CSPG4P12-202ENST00000559989 IGHV3-7P01780 117 aa12.21□□□□□ -0.45
CSPG4P12-202ENST00000559989 SEC11BP0C7V7 166 aa12.21□□□□□ -0.45
CSPG4P12-202ENST00000559989 CX3CL1P78423 397 aa12.21□□□□□ -0.45
CSPG4P12-202ENST00000559989 CCSMST1Q4G0I0 132 aa12.21□□□□□ -0.45
CSPG4P12-202ENST00000559989 RAX2Q96IS3 184 aa12.21□□□□□ -0.45
CSPG4P12-202ENST00000559989 MRGPRX3Q96LB0 322 aa12.21□□□□□ -0.45
CSPG4P12-202ENST00000559989 DDX60Q8IY21 1712 aaKnown RBP12.21□□□□□ -0.45
CSPG4P12-202ENST00000559989 KIDINS220Q9ULH0 1771 aa12.21□□□□□ -0.45
CSPG4P12-202ENST00000559989 DEGS2Q6QHC5 323 aa12.21□□□□□ -0.45
CSPG4P12-202ENST00000559989 RIMKLAQ8IXN7 391 aa12.21□□□□□ -0.45
CSPG4P12-202ENST00000559989 SCNM1Q9BWG6 230 aa12.21□□□□□ -0.45
CSPG4P12-202ENST00000559989 PDE4DIPQ5VU43 2346 aa12.21□□□□□ -0.45
CSPG4P12-202ENST00000559989 IGKV6-21A0A0C4DH24 114 aa12.21□□□□□ -0.46
CSPG4P12-202ENST00000559989 H3BMH7 237 aa12.21□□□□□ -0.46
CSPG4P12-202ENST00000559989 TCTN3Q6NUS6 607 aa12.21□□□□□ -0.46
CSPG4P12-202ENST00000559989 TRAV17A0A0B4J275 112 aa12.21□□□□□ -0.46
CSPG4P12-202ENST00000559989 TCRBV16S1A1N1A0A5B0 115 aa12.21□□□□□ -0.46
CSPG4P12-202ENST00000559989 FMODQ06828 376 aa12.21□□□□□ -0.46
CSPG4P12-202ENST00000559989 ZNF56Q15929 161 aa12.21□□□□□ -0.46
CSPG4P12-202ENST00000559989 ELSPBP1Q96BH3 223 aa12.21□□□□□ -0.46
CSPG4P12-202ENST00000559989 ZNF275Q9NSD4 429 aaPredicted RBP12.21□□□□□ -0.46
CSPG4P12-202ENST00000559989 GUCA2BQ16661 112 aa12.21□□□□□ -0.46
CSPG4P12-202ENST00000559989 KIRREL2Q6UWL6 708 aa12.21□□□□□ -0.46
CSPG4P12-202ENST00000559989 NT5CQ8TCD5 201 aa12.21□□□□□ -0.46
CSPG4P12-202ENST00000559989 SLC17A3O00476 420 aa12.2□□□□□ -0.46
CSPG4P12-202ENST00000559989 PCMT1P22061 227 aa12.2□□□□□ -0.46
CSPG4P12-202ENST00000559989 NIT1Q86X76 327 aa12.2□□□□□ -0.46
CSPG4P12-202ENST00000559989 ZNF107Q9UII5 783 aaPredicted RBP12.2□□□□□ -0.46
CSPG4P12-202ENST00000559989 TRAV8-2A0A0B4J237 113 aa12.2□□□□□ -0.46
CSPG4P12-202ENST00000559989 UPK1AO00322 258 aa12.2□□□□□ -0.46
CSPG4P12-202ENST00000559989 TSPOP30536 169 aa12.2□□□□□ -0.46
CSPG4P12-202ENST00000559989 DPTQ07507 201 aa12.2□□□□□ -0.46
CSPG4P12-202ENST00000559989 ZNF774Q6NX45 483 aa12.2□□□□□ -0.46
CSPG4P12-202ENST00000559989 SMOC1Q9H4F8 434 aa12.2□□□□□ -0.46
CSPG4P12-202ENST00000559989 MON2Q7Z3U7 1717 aa12.2□□□□□ -0.46
CSPG4P12-202ENST00000559989 NUBP1P53384 320 aa12.2□□□□□ -0.46
CSPG4P12-202ENST00000559989 ZDHHC8Q9ULC8 765 aa12.2□□□□□ -0.46
CSPG4P12-202ENST00000559989 TMEM250H0YL14 139 aa12.2□□□□□ -0.46
CSPG4P12-202ENST00000559989 MRGPRX1Q96LB2 322 aa12.2□□□□□ -0.46
CSPG4P12-202ENST00000559989 PARLQ9H300 379 aa12.2□□□□□ -0.46
CSPG4P12-202ENST00000559989 J3QR06 171 aa12.2□□□□□ -0.46
CSPG4P12-202ENST00000559989 FGF5P12034 268 aa12.2□□□□□ -0.46
CSPG4P12-202ENST00000559989 FAM71F2Q6NXP2 309 aa12.2□□□□□ -0.46
CSPG4P12-202ENST00000559989 ANKRD33Q7Z3H0 272 aa12.2□□□□□ -0.46
CSPG4P12-202ENST00000559989 FOXJ2Q9P0K8 574 aa12.2□□□□□ -0.46
CSPG4P12-202ENST00000559989 APELAP0DMC3 54 aa12.2□□□□□ -0.46
CSPG4P12-202ENST00000559989 TMIGD3P0DMS9 266 aaPredicted RBP12.2□□□□□ -0.46
CSPG4P12-202ENST00000559989 CNTFRP26992 372 aa12.2□□□□□ -0.46
CSPG4P12-202ENST00000559989 FGF9P31371 208 aaPredicted RBP12.2□□□□□ -0.46
CSPG4P12-202ENST00000559989 RTN4RL1Q86UN2 441 aaPredicted RBP12.2□□□□□ -0.46
CSPG4P12-202ENST00000559989 GLRX2Q9NS18 164 aa12.2□□□□□ -0.46
CSPG4P12-202ENST00000559989 PHIPQ8WWQ0 1821 aa12.2□□□□□ -0.46
CSPG4P12-202ENST00000559989 MTCL1Q9Y4B5 1905 aaKnown RBP12.19□□□□□ -0.46
CSPG4P12-202ENST00000559989 GZMHP20718 246 aa12.19□□□□□ -0.46
CSPG4P12-202ENST00000559989 CRYBB2P43320 205 aa12.19□□□□□ -0.46
CSPG4P12-202ENST00000559989 CKS1BP61024 79 aa12.19□□□□□ -0.46
CSPG4P12-202ENST00000559989 OR6X1Q8NH79 312 aa12.19□□□□□ -0.46
CSPG4P12-202ENST00000559989 PRSS27Q9BQR3 290 aa12.19□□□□□ -0.46
CSPG4P12-202ENST00000559989 TMEM160Q9NX00 188 aa12.19□□□□□ -0.46
CSPG4P12-202ENST00000559989 HCFC2Q9Y5Z7 792 aa12.19□□□□□ -0.46
CSPG4P12-202ENST00000559989 KCNE3Q9Y6H6 103 aa12.19□□□□□ -0.46
CSPG4P12-202ENST00000559989 SYNGR1O43759 233 aa12.19□□□□□ -0.46
CSPG4P12-202ENST00000559989 ERGP11308 486 aa12.19□□□□□ -0.46
CSPG4P12-202ENST00000559989 COL9A3Q14050 684 aaPredicted RBP12.19□□□□□ -0.46
CSPG4P12-202ENST00000559989 OR51M1Q9H341 326 aa12.19□□□□□ -0.46
CSPG4P12-202ENST00000559989 TSPAN2O60636 221 aa12.19□□□□□ -0.46
CSPG4P12-202ENST00000559989 KIR3DL3Q8N743 410 aa12.19□□□□□ -0.46
CSPG4P12-202ENST00000559989 TMEM45BQ96B21 275 aa12.19□□□□□ -0.46
CSPG4P12-202ENST00000559989 DERL1Q9BUN8 251 aa12.19□□□□□ -0.46
CSPG4P12-202ENST00000559989 NPVFQ9HCQ7 196 aa12.19□□□□□ -0.46
CSPG4P12-202ENST00000559989 IGKV6D-21A0A0A0MT36 114 aa12.19□□□□□ -0.46
CSPG4P12-202ENST00000559989 ZNF98A6NK75 572 aa12.19□□□□□ -0.46
CSPG4P12-202ENST00000559989 K7ESM1 405 aa12.19□□□□□ -0.46
CSPG4P12-202ENST00000559989 RBM11P57052 281 aaKnown RBP12.19□□□□□ -0.46
CSPG4P12-202ENST00000559989 SERF2P84101 59 aa12.19□□□□□ -0.46
CSPG4P12-202ENST00000559989 ACVR1Q04771 509 aa12.19□□□□□ -0.46
CSPG4P12-202ENST00000559989 ZNF770Q6IQ21 691 aaPredicted RBP12.19□□□□□ -0.46
CSPG4P12-202ENST00000559989 CEACAM18A8MTB9 384 aa12.19□□□□□ -0.46
CSPG4P12-202ENST00000559989 DEFB103AP81534 67 aa12.19□□□□□ -0.46
CSPG4P12-202ENST00000559989 ZNF688P0C7X2 276 aa12.18□□□□□ -0.46
CSPG4P12-202ENST00000559989 TMEM50BP56557 158 aa12.18□□□□□ -0.46
CSPG4P12-202ENST00000559989 GAPTQ8N292 157 aa12.18□□□□□ -0.46
CSPG4P12-202ENST00000559989 TRAV8-4A0A0B4J246 113 aa12.18□□□□□ -0.46
CSPG4P12-202ENST00000559989 ZNF32P17041 273 aa12.18□□□□□ -0.46
CSPG4P12-202ENST00000559989 RGP1Q92546 391 aaPredicted RBP12.18□□□□□ -0.46
CSPG4P12-202ENST00000559989 MRGPRFQ96AM1 343 aa12.18□□□□□ -0.46
CSPG4P12-202ENST00000559989 SCN2AQ99250 2005 aa12.18□□□□□ -0.46
CSPG4P12-202ENST00000559989 A0A1W2PRD5 423 aa12.18□□□□□ -0.46
CSPG4P12-202ENST00000559989 A0A1W2PRF3 423 aa12.18□□□□□ -0.46
CSPG4P12-202ENST00000559989 A0A1W2PRM7 423 aa12.18□□□□□ -0.46
CSPG4P12-202ENST00000559989 MGAT2Q10469 447 aa12.18□□□□□ -0.46
CSPG4P12-202ENST00000559989 C12orf73Q69YU5 71 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms