RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 TAAR3PQ9P1P4 343 aa6.86□□□□□ -1.31
SMAD3-212ENST00000559937 PURGQ9UJV8 347 aaKnown RBP6.86□□□□□ -1.31
SMAD3-212ENST00000559937 FREM2Q5SZK8 3169 aa6.86□□□□□ -1.31
SMAD3-212ENST00000559937 PKD1L2Q7Z442 2459 aa6.86□□□□□ -1.31
SMAD3-212ENST00000559937 DSPP15924 2871 aaKnown RBP6.85□□□□□ -1.31
SMAD3-212ENST00000559937 AKAP13Q12802 2813 aa6.85□□□□□ -1.31
SMAD3-212ENST00000559937 MBD3L4A6NDZ8 208 aaPredicted RBP6.85□□□□□ -1.31
SMAD3-212ENST00000559937 MBD3L3A6NE82 208 aaPredicted RBP6.85□□□□□ -1.31
SMAD3-212ENST00000559937 MBD3L5A6NJ08 208 aaPredicted RBP6.85□□□□□ -1.31
SMAD3-212ENST00000559937 RNF212BA8MTL3 300 aa6.85□□□□□ -1.31
SMAD3-212ENST00000559937 C1QTNF9BB2RNN3 333 aa6.85□□□□□ -1.31
SMAD3-212ENST00000559937 F8W036 122 aa6.85□□□□□ -1.31
SMAD3-212ENST00000559937 HSD17B6O14756 317 aa6.85□□□□□ -1.31
SMAD3-212ENST00000559937 HS3ST1O14792 307 aa6.85□□□□□ -1.31
SMAD3-212ENST00000559937 ZNHIT1O43257 154 aa6.85□□□□□ -1.31
SMAD3-212ENST00000559937 LYZL6O75951 148 aa6.85□□□□□ -1.31
SMAD3-212ENST00000559937 NXPH2O95156 264 aa6.85□□□□□ -1.31
SMAD3-212ENST00000559937 IGLV1-44P01699 117 aa6.85□□□□□ -1.31
SMAD3-212ENST00000559937 LMO1P25800 156 aa6.85□□□□□ -1.31
SMAD3-212ENST00000559937 DVL1P1P54792 670 aaPredicted RBP6.85□□□□□ -1.31
SMAD3-212ENST00000559937 PSG7Q13046 419 aa6.85□□□□□ -1.31
SMAD3-212ENST00000559937 ZNF718Q3SXZ3 478 aa6.85□□□□□ -1.31
SMAD3-212ENST00000559937 SLC35E4Q6ICL7 350 aa6.85□□□□□ -1.31
SMAD3-212ENST00000559937 ATRAIDQ6UW56 229 aa6.85□□□□□ -1.31
SMAD3-212ENST00000559937 IGFL3Q6UXB1 125 aa6.85□□□□□ -1.31
SMAD3-212ENST00000559937 C20orf204Q6ZNR8 217 aa6.85□□□□□ -1.31
SMAD3-212ENST00000559937 ZADH2Q8N4Q0 377 aa6.85□□□□□ -1.31
SMAD3-212ENST00000559937 TCTEX1D1Q8N7M0 179 aa6.85□□□□□ -1.31
SMAD3-212ENST00000559937 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.85□□□□□ -1.31
SMAD3-212ENST00000559937 C9orf106Q8NAJ2 232 aa6.85□□□□□ -1.31
SMAD3-212ENST00000559937 ZBTB34Q8NCN2 500 aa6.85□□□□□ -1.31
SMAD3-212ENST00000559937 MBD3L2Q8NHZ7 208 aaPredicted RBP6.85□□□□□ -1.31
SMAD3-212ENST00000559937 PLPPR1Q8TBJ4 325 aa6.85□□□□□ -1.31
SMAD3-212ENST00000559937 KLF14Q8TD94 323 aaPredicted RBP6.85□□□□□ -1.31
SMAD3-212ENST00000559937 FAM216AQ8WUB2 273 aa6.85□□□□□ -1.31
SMAD3-212ENST00000559937 HRH4Q9H3N8 390 aa6.85□□□□□ -1.31
SMAD3-212ENST00000559937 LIN7CQ9NUP9 197 aaKnown RBP6.85□□□□□ -1.31
SMAD3-212ENST00000559937 COQ3Q9NZJ6 369 aa6.85□□□□□ -1.31
SMAD3-212ENST00000559937 APC2O95996 2303 aa6.85□□□□□ -1.31
SMAD3-212ENST00000559937 INTS1Q8N201 2190 aaKnown RBP6.85□□□□□ -1.31
SMAD3-212ENST00000559937 GTF3C1Q12789 2109 aa6.85□□□□□ -1.31
SMAD3-212ENST00000559937 A0A1B0GW64 132 aa6.84□□□□□ -1.31
SMAD3-212ENST00000559937 TMEM30CPA0ZSE6 113 aa6.84□□□□□ -1.31
SMAD3-212ENST00000559937 UMAD1C9J7I0 102 aa6.84□□□□□ -1.31
SMAD3-212ENST00000559937 RNASEK-C17orf49H0YIS7 233 aa6.84□□□□□ -1.31
SMAD3-212ENST00000559937 IFNL4K9M1U5 179 aa6.84□□□□□ -1.31
SMAD3-212ENST00000559937 SIRPB1O00241 398 aa6.84□□□□□ -1.31
SMAD3-212ENST00000559937 WRBO00258 174 aa6.84□□□□□ -1.31
SMAD3-212ENST00000559937 HSPB6O14558 160 aa6.84□□□□□ -1.31
SMAD3-212ENST00000559937 TSPAN4O14817 238 aa6.84□□□□□ -1.31
SMAD3-212ENST00000559937 HSPA12AO43301 675 aa6.84□□□□□ -1.31
SMAD3-212ENST00000559937 ADAM20O43506 726 aa6.84□□□□□ -1.31
SMAD3-212ENST00000559937 WDR1O75083 606 aa6.84□□□□□ -1.31
SMAD3-212ENST00000559937 TSPAN15O95858 294 aa6.84□□□□□ -1.31
SMAD3-212ENST00000559937 HAND1O96004 215 aa6.84□□□□□ -1.31
SMAD3-212ENST00000559937 HEXAP06865 529 aa6.84□□□□□ -1.31
SMAD3-212ENST00000559937 H2AFB1P0C5Y9 115 aa6.84□□□□□ -1.31
SMAD3-212ENST00000559937 GLI4P10075 376 aa6.84□□□□□ -1.31
SMAD3-212ENST00000559937 MUC1P15941 1255 aaPredicted RBP6.84□□□□□ -1.31
SMAD3-212ENST00000559937 ADCYAP1P18509 176 aa6.84□□□□□ -1.31
SMAD3-212ENST00000559937 WT1P19544 449 aaPredicted RBP6.84□□□□□ -1.31
SMAD3-212ENST00000559937 PAX5Q02548 391 aa6.84□□□□□ -1.31
SMAD3-212ENST00000559937 RTP5Q14D33 572 aa6.84□□□□□ -1.31
SMAD3-212ENST00000559937 MBNL2Q5VZF2 373 aaKnown RBP6.84□□□□□ -1.31
SMAD3-212ENST00000559937 DHRS7BQ6IAN0 325 aaPredicted RBP6.84□□□□□ -1.31
SMAD3-212ENST00000559937 BEND4Q6ZU67 534 aa6.84□□□□□ -1.31
SMAD3-212ENST00000559937 GCNT2Q8N0V5 402 aa6.84□□□□□ -1.31
SMAD3-212ENST00000559937 PUSL1Q8N0Z8 303 aaKnown RBP6.84□□□□□ -1.31
SMAD3-212ENST00000559937 TMEM252Q8N6L7 170 aa6.84□□□□□ -1.31
SMAD3-212ENST00000559937 CNEP1R1Q8N9A8 125 aa6.84□□□□□ -1.31
SMAD3-212ENST00000559937 CLRN3Q8NCR9 226 aa6.84□□□□□ -1.31
SMAD3-212ENST00000559937 GNPNAT1Q96EK6 184 aaPredicted RBP6.84□□□□□ -1.31
SMAD3-212ENST00000559937 BSCL2Q96G97 398 aaPredicted RBP6.84□□□□□ -1.31
SMAD3-212ENST00000559937 RAB40CQ96S21 281 aa6.84□□□□□ -1.31
SMAD3-212ENST00000559937 SMIM3Q9BZL3 60 aa6.84□□□□□ -1.31
SMAD3-212ENST00000559937 HIPK2Q9H2X6 1198 aa6.84□□□□□ -1.31
SMAD3-212ENST00000559937 SMDT1Q9H4I9 107 aa6.84□□□□□ -1.31
SMAD3-212ENST00000559937 WFDC1Q9HC57 220 aa6.84□□□□□ -1.31
SMAD3-212ENST00000559937 KCNIP1Q9NZI2 227 aa6.84□□□□□ -1.31
SMAD3-212ENST00000559937 PLA2G2EQ9NZK7 142 aa6.84□□□□□ -1.31
SMAD3-212ENST00000559937 CACFD1Q9UGQ2 172 aa6.84□□□□□ -1.31
SMAD3-212ENST00000559937 ERRFI1Q9UJM3 462 aaPredicted RBP6.84□□□□□ -1.31
SMAD3-212ENST00000559937 TRAPPC2LQ9UL33 140 aa6.84□□□□□ -1.31
SMAD3-212ENST00000559937 PROCRQ9UNN8 238 aa6.84□□□□□ -1.31
SMAD3-212ENST00000559937 KPTNQ9Y664 436 aa6.84□□□□□ -1.31
SMAD3-212ENST00000559937 HEATR1Q9H583 2144 aaKnown RBP6.83□□□□□ -1.32
SMAD3-212ENST00000559937 IGHV2OR16-5A0A0B4J2B6 119 aa6.83□□□□□ -1.32
SMAD3-212ENST00000559937 A0A1W2PR80 420 aa6.83□□□□□ -1.32
SMAD3-212ENST00000559937 IGSF23A1L1A6 192 aa6.83□□□□□ -1.32
SMAD3-212ENST00000559937 BTBD17A6NE02 478 aa6.83□□□□□ -1.32
SMAD3-212ENST00000559937 FAM24AA6NFZ4 105 aa6.83□□□□□ -1.32
SMAD3-212ENST00000559937 OOEPA6NGQ2 149 aa6.83□□□□□ -1.32
SMAD3-212ENST00000559937 FAM90A26D6RGX4 464 aa6.83□□□□□ -1.32
SMAD3-212ENST00000559937 K7N7A8 449 aa6.83□□□□□ -1.32
SMAD3-212ENST00000559937 CDIPTO14735 213 aa6.83□□□□□ -1.32
SMAD3-212ENST00000559937 MLNRO43193 412 aa6.83□□□□□ -1.32
SMAD3-212ENST00000559937 CGAP01215 116 aa6.83□□□□□ -1.32
SMAD3-212ENST00000559937 SERPINE2P07093 398 aa6.83□□□□□ -1.32
SMAD3-212ENST00000559937 CECR9P0C854 216 aa6.83□□□□□ -1.32
SMAD3-212ENST00000559937 CEACAM1P13688 526 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 400.2 ms