RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 MFSD8Q8NHS3 518 aa2.31□□□□□ -2.04
SPG11-218ENST00000559754 EEF1AKMT1Q8WVE0 214 aa2.31□□□□□ -2.04
SPG11-218ENST00000559754 DGCR14Q96DF8 476 aaKnown RBP2.31□□□□□ -2.04
SPG11-218ENST00000559754 PDXPQ96GD0 296 aa2.31□□□□□ -2.04
SPG11-218ENST00000559754 RTBDNQ9BSG5 229 aaPredicted RBP2.31□□□□□ -2.04
SPG11-218ENST00000559754 OR51I1Q9H343 314 aa2.31□□□□□ -2.04
SPG11-218ENST00000559754 LHX9Q9NQ69 397 aa2.31□□□□□ -2.04
SPG11-218ENST00000559754 VPS29Q9UBQ0 182 aa2.31□□□□□ -2.04
SPG11-218ENST00000559754 KLK12Q9UKR0 248 aa2.31□□□□□ -2.04
SPG11-218ENST00000559754 ARL5AQ9Y689 179 aa2.31□□□□□ -2.04
SPG11-218ENST00000559754 TMEM14AQ9Y6G1 99 aa2.31□□□□□ -2.04
SPG11-218ENST00000559754 NCOA1Q15788 1441 aa2.31□□□□□ -2.04
SPG11-218ENST00000559754 MEGF6O75095 1541 aa2.31□□□□□ -2.04
SPG11-218ENST00000559754 PCF11O94913 1555 aaKnown RBP2.31□□□□□ -2.04
SPG11-218ENST00000559754 BAZ2AQ9UIF9 1905 aaKnown RBP2.3□□□□□ -2.04
SPG11-218ENST00000559754 IGHV3-49A0A0A0MS15 119 aa2.3□□□□□ -2.04
SPG11-218ENST00000559754 TMEM223A0PJW6 202 aa2.3□□□□□ -2.04
SPG11-218ENST00000559754 SMIM9A6NGZ8 99 aa2.3□□□□□ -2.04
SPG11-218ENST00000559754 ARGFXA6NJG6 315 aa2.3□□□□□ -2.04
SPG11-218ENST00000559754 C11orf94C9JXX5 98 aa2.3□□□□□ -2.04
SPG11-218ENST00000559754 IGKV1-39P01597 117 aa2.3□□□□□ -2.04
SPG11-218ENST00000559754 IGLV3-25P01717 112 aa2.3□□□□□ -2.04
SPG11-218ENST00000559754 HBZP02008 142 aa2.3□□□□□ -2.04
SPG11-218ENST00000559754 IGKV1D-39P04432 117 aa2.3□□□□□ -2.04
SPG11-218ENST00000559754 ATP5G1P05496 136 aa2.3□□□□□ -2.04
SPG11-218ENST00000559754 CRYBA1P05813 215 aa2.3□□□□□ -2.04
SPG11-218ENST00000559754 UCHL3P15374 230 aa2.3□□□□□ -2.04
SPG11-218ENST00000559754 CXCL3P19876 107 aa2.3□□□□□ -2.04
SPG11-218ENST00000559754 MAGEA12P43365 314 aa2.3□□□□□ -2.04
SPG11-218ENST00000559754 RPS10P46783 165 aaKnown RBP2.3□□□□□ -2.04
SPG11-218ENST00000559754 INPP1P49441 399 aa2.3□□□□□ -2.04
SPG11-218ENST00000559754 GNG10P50151 68 aa2.3□□□□□ -2.04
SPG11-218ENST00000559754 EMX1Q04741 257 aaPredicted RBP2.3□□□□□ -2.04
SPG11-218ENST00000559754 ATP5G2Q06055 141 aa2.3□□□□□ -2.04
SPG11-218ENST00000559754 SYCNQ0VAF6 134 aa2.3□□□□□ -2.04
SPG11-218ENST00000559754 PTGES3Q15185 160 aaKnown RBP2.3□□□□□ -2.04
SPG11-218ENST00000559754 HENMT1Q5T8I9 393 aaKnown RBP2.3□□□□□ -2.04
SPG11-218ENST00000559754 N4BP2L1Q5TBK1 243 aaPredicted RBP2.3□□□□□ -2.04
SPG11-218ENST00000559754 OR10K2Q6IF99 312 aa2.3□□□□□ -2.04
SPG11-218ENST00000559754 SFXN4Q6P4A7 337 aa2.3□□□□□ -2.04
SPG11-218ENST00000559754 CYHR1Q6ZMK1 362 aa2.3□□□□□ -2.04
SPG11-218ENST00000559754 NAA40Q86UY6 237 aa2.3□□□□□ -2.04
SPG11-218ENST00000559754 PDPNQ86YL7 162 aa2.3□□□□□ -2.04
SPG11-218ENST00000559754 ZDHHC22Q8N966 263 aa2.3□□□□□ -2.04
SPG11-218ENST00000559754 OR2M3Q8NG83 312 aa2.3□□□□□ -2.04
SPG11-218ENST00000559754 OR1P1Q8NH06 330 aa2.3□□□□□ -2.04
SPG11-218ENST00000559754 OR51H1Q8NH63 302 aa2.3□□□□□ -2.04
SPG11-218ENST00000559754 JOSD2Q8TAC2 188 aa2.3□□□□□ -2.04
SPG11-218ENST00000559754 AP3S1Q92572 193 aa2.3□□□□□ -2.04
SPG11-218ENST00000559754 OR7D2Q96RA2 312 aa2.3□□□□□ -2.04
SPG11-218ENST00000559754 CDX2Q99626 313 aaPredicted RBP2.3□□□□□ -2.04
SPG11-218ENST00000559754 PRRT1Q99946 306 aa2.3□□□□□ -2.04
SPG11-218ENST00000559754 THTPAQ9BU02 230 aa2.3□□□□□ -2.04
SPG11-218ENST00000559754 PECRQ9BY49 303 aa2.3□□□□□ -2.04
SPG11-218ENST00000559754 ULBP1Q9BZM6 244 aa2.3□□□□□ -2.04
SPG11-218ENST00000559754 ZNF436Q9C0F3 470 aaPredicted RBP2.3□□□□□ -2.04
SPG11-218ENST00000559754 OR51I2Q9H344 312 aa2.3□□□□□ -2.04
SPG11-218ENST00000559754 CENPHQ9H3R5 247 aa2.3□□□□□ -2.04
SPG11-218ENST00000559754 SND1-IT1Q9HBX3 110 aa2.3□□□□□ -2.04
SPG11-218ENST00000559754 RAB26Q9ULW5 256 aa2.3□□□□□ -2.04
SPG11-218ENST00000559754 YTHDF2Q9Y5A9 579 aaKnown RBP2.3□□□□□ -2.04
SPG11-218ENST00000559754 ZNF706Q9Y5V0 76 aaPredicted RBP2.3□□□□□ -2.04
SPG11-218ENST00000559754 PTPRTO14522 1441 aa2.3□□□□□ -2.04
SPG11-218ENST00000559754 KIAA1671Q9BY89 1806 aa2.3□□□□□ -2.04
SPG11-218ENST00000559754 PLXNB3Q9ULL4 1909 aa2.29□□□□□ -2.04
SPG11-218ENST00000559754 NPATQ14207 1427 aa2.29□□□□□ -2.04
SPG11-218ENST00000559754 TRBV6-6A0A0A6YYG2 114 aa2.29□□□□□ -2.04
SPG11-218ENST00000559754 IGKV1-6A0A0C4DH72 117 aa2.29□□□□□ -2.04
SPG11-218ENST00000559754 GMNCA6NCL1 334 aa2.29□□□□□ -2.04
SPG11-218ENST00000559754 TMEM238C9JI98 176 aa2.29□□□□□ -2.04
SPG11-218ENST00000559754 F5H5P2 479 aa2.29□□□□□ -2.04
SPG11-218ENST00000559754 ISLRO14498 428 aa2.29□□□□□ -2.04
SPG11-218ENST00000559754 OR4A8P0C604 315 aa2.29□□□□□ -2.04
SPG11-218ENST00000559754 SEC11BP0C7V7 166 aa2.29□□□□□ -2.04
SPG11-218ENST00000559754 CTSEP14091 401 aa2.29□□□□□ -2.04
SPG11-218ENST00000559754 CXCL2P19875 107 aa2.29□□□□□ -2.04
SPG11-218ENST00000559754 CNTFRP26992 372 aa2.29□□□□□ -2.04
SPG11-218ENST00000559754 CXCL12P48061 93 aa2.29□□□□□ -2.04
SPG11-218ENST00000559754 NUDT2P50583 147 aa2.29□□□□□ -2.04
SPG11-218ENST00000559754 RAB2AP61019 212 aa2.29□□□□□ -2.04
SPG11-218ENST00000559754 RPS24P62847 133 aaKnown RBP2.29□□□□□ -2.04
SPG11-218ENST00000559754 HPCAP84074 193 aa2.29□□□□□ -2.04
SPG11-218ENST00000559754 EDDM3AQ14507 147 aa2.29□□□□□ -2.04
SPG11-218ENST00000559754 RSU1Q15404 277 aa2.29□□□□□ -2.04
SPG11-218ENST00000559754 BATFQ16520 125 aa2.29□□□□□ -2.04
SPG11-218ENST00000559754 MAPK14Q16539 360 aa2.29□□□□□ -2.04
SPG11-218ENST00000559754 HIST2H3PS2Q5TEC6 136 aa2.29□□□□□ -2.04
SPG11-218ENST00000559754 CYB5R2Q6BCY4 276 aa2.29□□□□□ -2.04
SPG11-218ENST00000559754 Q6ZRU5 148 aa2.29□□□□□ -2.04
SPG11-218ENST00000559754 FAM19A3Q7Z5A8 133 aa2.29□□□□□ -2.04
SPG11-218ENST00000559754 WDR86Q86TI4 376 aa2.29□□□□□ -2.04
SPG11-218ENST00000559754 C1orf158Q8N1D5 194 aa2.29□□□□□ -2.04
SPG11-218ENST00000559754 PXT1Q8NFP0 134 aa2.29□□□□□ -2.04
SPG11-218ENST00000559754 DERL3Q96Q80 235 aa2.29□□□□□ -2.04
SPG11-218ENST00000559754 TBL1YQ9BQ87 522 aa2.29□□□□□ -2.04
SPG11-218ENST00000559754 EIF5A2Q9GZV4 153 aaKnown RBP2.29□□□□□ -2.04
SPG11-218ENST00000559754 ZSCAN16Q9H4T2 348 aaPredicted RBP2.29□□□□□ -2.04
SPG11-218ENST00000559754 WFDC1Q9HC57 220 aa2.29□□□□□ -2.04
SPG11-218ENST00000559754 HES4Q9HCC6 221 aa2.29□□□□□ -2.04
SPG11-218ENST00000559754 CYTL1Q9NRR1 136 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms