RNA–Protein interactions for RNA: ENST00000559658.5

CHRNA3-206, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 1,889 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-206ENST00000559658 ZNF841Q6ZN19 808 aa14.33□□□□□ -0.11
CHRNA3-206ENST00000559658 SLC36A1Q7Z2H8 476 aa14.33□□□□□ -0.11
CHRNA3-206ENST00000559658 OR52L2PQ8NGH6 319 aa14.33□□□□□ -0.11
CHRNA3-206ENST00000559658 OR6F1Q8NGZ6 308 aa14.33□□□□□ -0.11
CHRNA3-206ENST00000559658 DNTTIP1Q9H147 329 aa14.33□□□□□ -0.11
CHRNA3-206ENST00000559658 C5orf66Q9H5L9 145 aa14.33□□□□□ -0.11
CHRNA3-206ENST00000559658 KAAG1Q9UBP8 84 aa14.33□□□□□ -0.11
CHRNA3-206ENST00000559658 FASNP49327 2511 aaKnown RBP14.33□□□□□ -0.12
CHRNA3-206ENST00000559658 YLPM1P49750 1951 aaKnown RBP14.33□□□□□ -0.12
CHRNA3-206ENST00000559658 CD300CQ08708 224 aa14.33□□□□□ -0.12
CHRNA3-206ENST00000559658 C17orf58Q2M2W7 97 aa14.33□□□□□ -0.12
CHRNA3-206ENST00000559658 ZNF787Q6DD87 383 aa14.33□□□□□ -0.12
CHRNA3-206ENST00000559658 OR5D13Q8NGL4 314 aa14.33□□□□□ -0.12
CHRNA3-206ENST00000559658 ARL11Q969Q4 196 aa14.33□□□□□ -0.12
CHRNA3-206ENST00000559658 TMEM230Q96A57 120 aa14.33□□□□□ -0.12
CHRNA3-206ENST00000559658 MED30Q96HR3 178 aa14.33□□□□□ -0.12
CHRNA3-206ENST00000559658 SLC25A21Q9BQT8 299 aaPredicted RBP14.33□□□□□ -0.12
CHRNA3-206ENST00000559658 ARHGAP32A7KAX9 2087 aa14.33□□□□□ -0.12
CHRNA3-206ENST00000559658 DOCK11Q5JSL3 2073 aa14.33□□□□□ -0.12
CHRNA3-206ENST00000559658 MALRD1Q5VYJ5 2156 aa14.32□□□□□ -0.12
CHRNA3-206ENST00000559658 NDUFB3O43676 98 aa14.32□□□□□ -0.12
CHRNA3-206ENST00000559658 PPYP01298 95 aa14.32□□□□□ -0.12
CHRNA3-206ENST00000559658 RPS2P15880 293 aaKnown RBP14.32□□□□□ -0.12
CHRNA3-206ENST00000559658 UBE2MP61081 183 aaKnown RBP14.32□□□□□ -0.12
CHRNA3-206ENST00000559658 PEG10Q86TG7 708 aaKnown RBP14.32□□□□□ -0.12
CHRNA3-206ENST00000559658 OR10V1Q8NGI7 309 aa14.32□□□□□ -0.12
CHRNA3-206ENST00000559658 H1FXQ92522 213 aaKnown RBP14.32□□□□□ -0.12
CHRNA3-206ENST00000559658 C14orf79Q96F83 325 aa14.32□□□□□ -0.12
CHRNA3-206ENST00000559658 GPHA2Q96T91 129 aa14.32□□□□□ -0.12
CHRNA3-206ENST00000559658 RTBDNQ9BSG5 229 aaPredicted RBP14.32□□□□□ -0.12
CHRNA3-206ENST00000559658 FAM172BPA6NC97 362 aa14.31□□□□□ -0.12
CHRNA3-206ENST00000559658 TUSC2O75896 110 aa14.31□□□□□ -0.12
CHRNA3-206ENST00000559658 MMP23AO75900 390 aa14.31□□□□□ -0.12
CHRNA3-206ENST00000559658 IGHV3-7P01780 117 aa14.31□□□□□ -0.12
CHRNA3-206ENST00000559658 CGB3P0DN86 165 aa14.31□□□□□ -0.12
CHRNA3-206ENST00000559658 CGB7P0DN87 165 aa14.31□□□□□ -0.12
CHRNA3-206ENST00000559658 CCL3L1P16619 93 aa14.31□□□□□ -0.12
CHRNA3-206ENST00000559658 ERP29P30040 261 aaKnown RBP14.31□□□□□ -0.12
CHRNA3-206ENST00000559658 MECP2P51608 486 aaKnown RBP14.31□□□□□ -0.12
CHRNA3-206ENST00000559658 CBX3Q13185 183 aa14.31□□□□□ -0.12
CHRNA3-206ENST00000559658 H1FOOQ8IZA3 346 aaPredicted RBP14.31□□□□□ -0.12
CHRNA3-206ENST00000559658 MOB3AQ96BX8 217 aa14.31□□□□□ -0.12
CHRNA3-206ENST00000559658 GHITMQ9H3K2 345 aa14.31□□□□□ -0.12
CHRNA3-206ENST00000559658 KCNIP1Q9NZI2 227 aa14.31□□□□□ -0.12
CHRNA3-206ENST00000559658 GPR132Q9UNW8 380 aa14.31□□□□□ -0.12
CHRNA3-206ENST00000559658 FPR2P25090 351 aa14.31□□□□□ -0.12
CHRNA3-206ENST00000559658 PPP1CCP36873 323 aaKnown RBP14.31□□□□□ -0.12
CHRNA3-206ENST00000559658 LRRC10Q5BKY1 277 aa14.31□□□□□ -0.12
CHRNA3-206ENST00000559658 C6orf183Q5T699 404 aa14.31□□□□□ -0.12
CHRNA3-206ENST00000559658 OR10J5Q8NHC4 309 aa14.31□□□□□ -0.12
CHRNA3-206ENST00000559658 PERPQ96FX8 193 aa14.31□□□□□ -0.12
CHRNA3-206ENST00000559658 BPESC1Q9GZL8 116 aa14.31□□□□□ -0.12
CHRNA3-206ENST00000559658 RDH8Q9NYR8 311 aa14.31□□□□□ -0.12
CHRNA3-206ENST00000559658 CALYQ9NYX4 217 aa14.31□□□□□ -0.12
CHRNA3-206ENST00000559658 ABCA2Q9BZC7 2435 aa14.3□□□□□ -0.12
CHRNA3-206ENST00000559658 C7orf66A4D0T2 115 aa14.3□□□□□ -0.12
CHRNA3-206ENST00000559658 PHF1O43189 567 aaPredicted RBP14.3□□□□□ -0.12
CHRNA3-206ENST00000559658 PGAM2P15259 253 aa14.3□□□□□ -0.12
CHRNA3-206ENST00000559658 IL2RGP31785 369 aa14.3□□□□□ -0.12
CHRNA3-206ENST00000559658 GPR6P46095 362 aaPredicted RBP14.3□□□□□ -0.12
CHRNA3-206ENST00000559658 RPL31P62899 125 aaKnown RBP14.3□□□□□ -0.12
CHRNA3-206ENST00000559658 CR1LQ2VPA4 569 aa14.3□□□□□ -0.12
CHRNA3-206ENST00000559658 ZDHHC22Q8N966 263 aa14.3□□□□□ -0.12
CHRNA3-206ENST00000559658 RAB1CQ92928 201 aa14.3□□□□□ -0.12
CHRNA3-206ENST00000559658 LEAP2Q969E1 77 aa14.3□□□□□ -0.12
CHRNA3-206ENST00000559658 MARVELD3Q96A59 401 aa14.3□□□□□ -0.12
CHRNA3-206ENST00000559658 DACT3Q96B18 629 aaPredicted RBP14.3□□□□□ -0.12
CHRNA3-206ENST00000559658 TIMD4Q96H15 378 aa14.3□□□□□ -0.12
CHRNA3-206ENST00000559658 LURAP1Q96LR2 239 aa14.3□□□□□ -0.12
CHRNA3-206ENST00000559658 PRR13Q9NZ81 148 aa14.3□□□□□ -0.12
CHRNA3-206ENST00000559658 PCDHB10Q9UN67 800 aa14.3□□□□□ -0.12
CHRNA3-206ENST00000559658 NPIPB11E5RHQ5 1161 aa14.29□□□□□ -0.12
CHRNA3-206ENST00000559658 FSTL3O95633 263 aa14.29□□□□□ -0.12
CHRNA3-206ENST00000559658 DHFRP00374 187 aa14.29□□□□□ -0.12
CHRNA3-206ENST00000559658 HEXAP06865 529 aa14.29□□□□□ -0.12
CHRNA3-206ENST00000559658 AKR1C4P17516 323 aa14.29□□□□□ -0.12
CHRNA3-206ENST00000559658 PPP1R1AQ13522 171 aa14.29□□□□□ -0.12
CHRNA3-206ENST00000559658 KCNJ8Q15842 424 aa14.29□□□□□ -0.12
CHRNA3-206ENST00000559658 TMEM200BQ69YZ2 307 aa14.29□□□□□ -0.12
CHRNA3-206ENST00000559658 GLDNQ6ZMI3 551 aaPredicted RBP14.29□□□□□ -0.12
CHRNA3-206ENST00000559658 MUC20Q8N307 709 aaPredicted RBP14.29□□□□□ -0.12
CHRNA3-206ENST00000559658 GALMQ96C23 342 aa14.29□□□□□ -0.12
CHRNA3-206ENST00000559658 ZNF69Q9UC07 566 aa14.29□□□□□ -0.12
CHRNA3-206ENST00000559658 MGAT4AQ9UM21 535 aa14.29□□□□□ -0.12
CHRNA3-206ENST00000559658 POM121CA8CG34 1229 aa14.29□□□□□ -0.12
CHRNA3-206ENST00000559658 HSPA12AO43301 675 aa14.29□□□□□ -0.12
CHRNA3-206ENST00000559658 NDUFA2O43678 99 aa14.29□□□□□ -0.12
CHRNA3-206ENST00000559658 WNT2P09544 360 aa14.29□□□□□ -0.12
CHRNA3-206ENST00000559658 ZNF728P0DKX0 622 aa14.29□□□□□ -0.12
CHRNA3-206ENST00000559658 CEACAM6P40199 344 aa14.29□□□□□ -0.12
CHRNA3-206ENST00000559658 RAG2P55895 527 aa14.29□□□□□ -0.12
CHRNA3-206ENST00000559658 ATP5J2P56134 94 aa14.29□□□□□ -0.12
CHRNA3-206ENST00000559658 TMEM33P57088 247 aa14.29□□□□□ -0.12
CHRNA3-206ENST00000559658 TMEM155Q4W5P6 130 aa14.29□□□□□ -0.12
CHRNA3-206ENST00000559658 PRAMEF5Q5TYX0 476 aa14.29□□□□□ -0.12
CHRNA3-206ENST00000559658 FAM185AQ8N0U4 392 aa14.29□□□□□ -0.12
CHRNA3-206ENST00000559658 SECTM1Q8WVN6 248 aa14.29□□□□□ -0.12
CHRNA3-206ENST00000559658 OR6C3Q9NZP0 311 aa14.29□□□□□ -0.12
CHRNA3-206ENST00000559658 TRGV10A0A0A0MS01 117 aa14.28□□□□□ -0.12
CHRNA3-206ENST00000559658 A8MV72 311 aaPredicted RBP14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms