RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 OR4K15Q8NH41 348 aa3.53□□□□□ -1.84
SNX1-205ENST00000559339 PLPPR1Q8TBJ4 325 aa3.53□□□□□ -1.84
SNX1-205ENST00000559339 CCDC107Q8WV48 283 aa3.53□□□□□ -1.84
SNX1-205ENST00000559339 WFDC12Q8WWY7 111 aa3.53□□□□□ -1.84
SNX1-205ENST00000559339 TAF15Q92804 592 aaKnown RBP eCLIP3.53□□□□□ -1.84
SNX1-205ENST00000559339 TOMM40LQ969M1 308 aa3.53□□□□□ -1.84
SNX1-205ENST00000559339 PRSS22Q9GZN4 317 aa3.53□□□□□ -1.84
SNX1-205ENST00000559339 RIMS4Q9H426 269 aaPredicted RBP3.53□□□□□ -1.84
SNX1-205ENST00000559339 ZNF696Q9H7X3 374 aa3.53□□□□□ -1.84
SNX1-205ENST00000559339 ZNF286AQ9HBT8 521 aa3.53□□□□□ -1.84
SNX1-205ENST00000559339 CHMP1AQ9HD42 196 aaPredicted RBP3.53□□□□□ -1.84
SNX1-205ENST00000559339 VCX3AQ9NNX9 186 aa3.53□□□□□ -1.84
SNX1-205ENST00000559339 OR2S2Q9NQN1 319 aa3.53□□□□□ -1.84
SNX1-205ENST00000559339 NDUFB11Q9NX14 153 aa3.53□□□□□ -1.84
SNX1-205ENST00000559339 ABRACLQ9P1F3 81 aa3.53□□□□□ -1.84
SNX1-205ENST00000559339 RCC2Q9P258 522 aaKnown RBP3.53□□□□□ -1.84
SNX1-205ENST00000559339 STEAP1Q9UHE8 339 aa3.53□□□□□ -1.84
SNX1-205ENST00000559339 MGAT4AQ9UM21 535 aa3.53□□□□□ -1.84
SNX1-205ENST00000559339 PSG11Q9UQ72 335 aa3.53□□□□□ -1.84
SNX1-205ENST00000559339 RRP15Q9Y3B9 282 aaKnown RBP3.53□□□□□ -1.84
SNX1-205ENST00000559339 V9GY05 133 aa3.53□□□□□ -1.84
SNX1-205ENST00000559339 TRAV1-2A0A0B4J238 106 aa3.52□□□□□ -1.85
SNX1-205ENST00000559339 TRAV39A0A0B4J263 110 aa3.52□□□□□ -1.85
SNX1-205ENST00000559339 TRDV1A0A1B0GX56 115 aa3.52□□□□□ -1.85
SNX1-205ENST00000559339 METTL21EPA6NDL7 271 aa3.52□□□□□ -1.85
SNX1-205ENST00000559339 A6NDX4 124 aa3.52□□□□□ -1.85
SNX1-205ENST00000559339 A6NJY4 79 aa3.52□□□□□ -1.85
SNX1-205ENST00000559339 IFITM5A6NNB3 132 aa3.52□□□□□ -1.85
SNX1-205ENST00000559339 TXNL1O43396 289 aa3.52□□□□□ -1.85
SNX1-205ENST00000559339 OR2F2O95006 317 aa3.52□□□□□ -1.85
SNX1-205ENST00000559339 HBZP02008 142 aa3.52□□□□□ -1.85
SNX1-205ENST00000559339 GAPDHP04406 335 aaKnown RBP3.52□□□□□ -1.85
SNX1-205ENST00000559339 CGB3P0DN86 165 aa3.52□□□□□ -1.85
SNX1-205ENST00000559339 CGB7P0DN87 165 aa3.52□□□□□ -1.85
SNX1-205ENST00000559339 VSIG10L2P0DP72 767 aa3.52□□□□□ -1.85
SNX1-205ENST00000559339 RCC1P18754 421 aaPredicted RBP3.52□□□□□ -1.85
SNX1-205ENST00000559339 RAB3BP20337 219 aa3.52□□□□□ -1.85
SNX1-205ENST00000559339 GADD45AP24522 165 aa3.52□□□□□ -1.85
SNX1-205ENST00000559339 PAX6P26367 422 aa3.52□□□□□ -1.85
SNX1-205ENST00000559339 BLVRBP30043 206 aaPredicted RBP3.52□□□□□ -1.85
SNX1-205ENST00000559339 GP2P55259 537 aaKnown RBP3.52□□□□□ -1.85
SNX1-205ENST00000559339 LOXL3P58215 753 aa3.52□□□□□ -1.85
SNX1-205ENST00000559339 PROK1P58294 105 aa3.52□□□□□ -1.85
SNX1-205ENST00000559339 RPS27AP62979 156 aaKnown RBP3.52□□□□□ -1.85
SNX1-205ENST00000559339 HTD2P86397 168 aa3.52□□□□□ -1.85
SNX1-205ENST00000559339 FABP5Q01469 135 aa3.52□□□□□ -1.85
SNX1-205ENST00000559339 HES1Q14469 280 aa3.52□□□□□ -1.85
SNX1-205ENST00000559339 HERPUD1Q15011 391 aa3.52□□□□□ -1.85
SNX1-205ENST00000559339 P2RY14Q15391 338 aa3.52□□□□□ -1.85
SNX1-205ENST00000559339 C2orf68Q2NKX9 166 aa3.52□□□□□ -1.85
SNX1-205ENST00000559339 TIMM50Q3ZCQ8 353 aa3.52□□□□□ -1.85
SNX1-205ENST00000559339 PRR31Q5SQ13 230 aa3.52□□□□□ -1.85
SNX1-205ENST00000559339 UBE2UQ5VVX9 321 aa3.52□□□□□ -1.85
SNX1-205ENST00000559339 ZNF773Q6PK81 442 aa3.52□□□□□ -1.85
SNX1-205ENST00000559339 CD200R1LQ6Q8B3 271 aa3.52□□□□□ -1.85
SNX1-205ENST00000559339 CCBE1Q6UXH8 406 aaPredicted RBP3.52□□□□□ -1.85
SNX1-205ENST00000559339 BAIAP2L2Q6UXY1 529 aa3.52□□□□□ -1.85
SNX1-205ENST00000559339 TMEM91Q6ZNR0 172 aa3.52□□□□□ -1.85
SNX1-205ENST00000559339 MOB1BQ7L9L4 216 aa3.52□□□□□ -1.85
SNX1-205ENST00000559339 C6orf201Q7Z4U5 140 aa3.52□□□□□ -1.85
SNX1-205ENST00000559339 TPRA1Q86W33 373 aa3.52□□□□□ -1.85
SNX1-205ENST00000559339 TMEM219Q86XT9 240 aa3.52□□□□□ -1.85
SNX1-205ENST00000559339 THNSL2Q86YJ6 484 aa3.52□□□□□ -1.85
SNX1-205ENST00000559339 SPARTQ8N0X7 666 aa3.52□□□□□ -1.85
SNX1-205ENST00000559339 OR8H3Q8N146 312 aa3.52□□□□□ -1.85
SNX1-205ENST00000559339 DYNAPQ8N1N2 210 aa3.52□□□□□ -1.85
SNX1-205ENST00000559339 C8orf31Q8N9H6 132 aa3.52□□□□□ -1.85
SNX1-205ENST00000559339 OR51D1Q8NGF3 324 aa3.52□□□□□ -1.85
SNX1-205ENST00000559339 OR56B1Q8NGI3 324 aa3.52□□□□□ -1.85
SNX1-205ENST00000559339 OR56B4Q8NH76 319 aa3.52□□□□□ -1.85
SNX1-205ENST00000559339 PIFOQ8TCI5 191 aa3.52□□□□□ -1.85
SNX1-205ENST00000559339 IL1F10Q8WWZ1 152 aa3.52□□□□□ -1.85
SNX1-205ENST00000559339 LEAP2Q969E1 77 aa3.52□□□□□ -1.85
SNX1-205ENST00000559339 PHF21AQ96BD5 680 aa3.52□□□□□ -1.85
SNX1-205ENST00000559339 FAM3DQ96BQ1 224 aa3.52□□□□□ -1.85
SNX1-205ENST00000559339 CITED1Q99966 193 aa3.52□□□□□ -1.85
SNX1-205ENST00000559339 SLC25A33Q9BSK2 321 aa3.52□□□□□ -1.85
SNX1-205ENST00000559339 CENPOQ9BU64 300 aa3.52□□□□□ -1.85
SNX1-205ENST00000559339 TM2D1Q9BX74 207 aa3.52□□□□□ -1.85
SNX1-205ENST00000559339 LIN7BQ9HAP6 207 aa3.52□□□□□ -1.85
SNX1-205ENST00000559339 TAF9BQ9HBM6 251 aa3.52□□□□□ -1.85
SNX1-205ENST00000559339 C12orf4Q9NQ89 552 aa3.52□□□□□ -1.85
SNX1-205ENST00000559339 MBNL3Q9NUK0 354 aaKnown RBP3.52□□□□□ -1.85
SNX1-205ENST00000559339 GFOD1Q9NXC2 390 aa3.52□□□□□ -1.85
SNX1-205ENST00000559339 ZNF581Q9P0T4 197 aa3.52□□□□□ -1.85
SNX1-205ENST00000559339 JPT1Q9UK76 154 aa3.52□□□□□ -1.85
SNX1-205ENST00000559339 RAB22AQ9UL26 194 aa3.52□□□□□ -1.85
SNX1-205ENST00000559339 HSF4Q9ULV5 492 aa3.52□□□□□ -1.85
SNX1-205ENST00000559339 STUB1Q9UNE7 303 aa3.52□□□□□ -1.85
SNX1-205ENST00000559339 SSR3Q9UNL2 185 aa3.52□□□□□ -1.85
SNX1-205ENST00000559339 AK6Q9Y3D8 172 aaKnown RBP3.52□□□□□ -1.85
SNX1-205ENST00000559339 A0A087WXM4 84 aa3.51□□□□□ -1.85
SNX1-205ENST00000559339 IGHV3-43A0A0B4J1X8 118 aa3.51□□□□□ -1.85
SNX1-205ENST00000559339 NCBP2LA6PVI3 153 aaKnown RBP3.51□□□□□ -1.85
SNX1-205ENST00000559339 TMEM14DPA8MWL7 114 aa3.51□□□□□ -1.85
SNX1-205ENST00000559339 C12orf77C9JDV5 145 aa3.51□□□□□ -1.85
SNX1-205ENST00000559339 LY6LH3BQJ8 138 aa3.51□□□□□ -1.85
SNX1-205ENST00000559339 C15orf65H3BRN8 121 aa3.51□□□□□ -1.85
SNX1-205ENST00000559339 HSD17B6O14756 317 aa3.51□□□□□ -1.85
SNX1-205ENST00000559339 HSPA12AO43301 675 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms