RNA–Protein interactions for RNA: ENST00000559309.5

SNRPA1-207, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5

Gene SNRPA1, Length 924 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-207ENST00000559309 ERVFRD-1P60508 538 aa12.11□□□□□ -0.47
SNRPA1-207ENST00000559309 HLA-DRB3P79483 266 aa12.11□□□□□ -0.47
SNRPA1-207ENST00000559309 MRPS10P82664 201 aaKnown RBP12.11□□□□□ -0.47
SNRPA1-207ENST00000559309 HTD2P86397 168 aa12.11□□□□□ -0.47
SNRPA1-207ENST00000559309 GUCA2AQ02747 115 aa12.11□□□□□ -0.47
SNRPA1-207ENST00000559309 TMEM30BQ3MIR4 351 aa12.11□□□□□ -0.47
SNRPA1-207ENST00000559309 LY6G6FQ5SQ64 297 aa12.11□□□□□ -0.47
SNRPA1-207ENST00000559309 C5orf24Q7Z6I8 188 aa12.11□□□□□ -0.47
SNRPA1-207ENST00000559309 HOGA1Q86XE5 327 aa12.11□□□□□ -0.47
SNRPA1-207ENST00000559309 ZNF596Q8TC21 504 aa12.11□□□□□ -0.47
SNRPA1-207ENST00000559309 CCDC107Q8WV48 283 aa12.11□□□□□ -0.47
SNRPA1-207ENST00000559309 GCDHQ92947 438 aaPredicted RBP12.11□□□□□ -0.47
SNRPA1-207ENST00000559309 SNAPC3Q92966 411 aa12.11□□□□□ -0.47
SNRPA1-207ENST00000559309 CABLES2Q9BTV7 478 aa12.11□□□□□ -0.47
SNRPA1-207ENST00000559309 AKIP1Q9NQ31 210 aa12.11□□□□□ -0.47
SNRPA1-207ENST00000559309 TRAPPC2LQ9UL33 140 aa12.11□□□□□ -0.47
SNRPA1-207ENST00000559309 MEX3AA1L020 520 aaKnown RBP12.1□□□□□ -0.47
SNRPA1-207ENST00000559309 GABARAPH6UMI1 98 aa12.1□□□□□ -0.47
SNRPA1-207ENST00000559309 HBZP02008 142 aa12.1□□□□□ -0.47
SNRPA1-207ENST00000559309 LPLP06858 475 aa12.1□□□□□ -0.47
SNRPA1-207ENST00000559309 S100A5P33763 92 aa12.1□□□□□ -0.47
SNRPA1-207ENST00000559309 TALDO1P37837 337 aa12.1□□□□□ -0.47
SNRPA1-207ENST00000559309 GLP1RP43220 463 aa12.1□□□□□ -0.47
SNRPA1-207ENST00000559309 CBX5P45973 191 aa12.1□□□□□ -0.47
SNRPA1-207ENST00000559309 GNG2P59768 71 aa12.1□□□□□ -0.47
SNRPA1-207ENST00000559309 ARFRP1Q13795 201 aa12.1□□□□□ -0.47
SNRPA1-207ENST00000559309 HERPUD1Q15011 391 aa12.1□□□□□ -0.47
SNRPA1-207ENST00000559309 Q3ZCU0 254 aa12.1□□□□□ -0.47
SNRPA1-207ENST00000559309 KLF17Q5JT82 389 aaPredicted RBP12.1□□□□□ -0.47
SNRPA1-207ENST00000559309 UTF1Q5T230 341 aa12.1□□□□□ -0.47
SNRPA1-207ENST00000559309 C8orf31Q8N9H6 132 aa12.1□□□□□ -0.47
SNRPA1-207ENST00000559309 SMIM4Q8WVI0 70 aa12.1□□□□□ -0.47
SNRPA1-207ENST00000559309 ING3Q9NXR8 418 aa12.1□□□□□ -0.47
SNRPA1-207ENST00000559309 IDI2-AS1Q9NZ38 188 aa12.1□□□□□ -0.47
SNRPA1-207ENST00000559309 ZNF230Q9UIE0 474 aaPredicted RBP12.1□□□□□ -0.47
SNRPA1-207ENST00000559309 AUP1Q9Y679 476 aa12.1□□□□□ -0.47
SNRPA1-207ENST00000559309 MXRA5Q9NR99 2828 aa12.09□□□□□ -0.47
SNRPA1-207ENST00000559309 FABP12A6NFH5 140 aa12.09□□□□□ -0.47
SNRPA1-207ENST00000559309 TRDCB7Z8K6 153 aa12.09□□□□□ -0.47
SNRPA1-207ENST00000559309 RNASEK-C17orf49H0YIS7 233 aa12.09□□□□□ -0.47
SNRPA1-207ENST00000559309 FPR2P25090 351 aa12.09□□□□□ -0.47
SNRPA1-207ENST00000559309 SSBP1Q04837 148 aaKnown RBP12.09□□□□□ -0.47
SNRPA1-207ENST00000559309 METTL11BQ5VVY1 283 aa12.09□□□□□ -0.47
SNRPA1-207ENST00000559309 VMO1Q7Z5L0 202 aa12.09□□□□□ -0.47
SNRPA1-207ENST00000559309 GVQW1Q8N7I0 195 aa12.09□□□□□ -0.47
SNRPA1-207ENST00000559309 ZNF439Q8NDP4 499 aa12.09□□□□□ -0.47
SNRPA1-207ENST00000559309 OR11H6Q8NGC7 330 aa12.09□□□□□ -0.47
SNRPA1-207ENST00000559309 OR4A4PQ8NGN8 299 aa12.09□□□□□ -0.47
SNRPA1-207ENST00000559309 OR1L1Q8NH94 360 aa12.09□□□□□ -0.47
SNRPA1-207ENST00000559309 ARL11Q969Q4 196 aa12.09□□□□□ -0.47
SNRPA1-207ENST00000559309 SDHCQ99643 169 aaPredicted RBP12.09□□□□□ -0.47
SNRPA1-207ENST00000559309 C7orf69Q9H7B7 122 aa12.09□□□□□ -0.47
SNRPA1-207ENST00000559309 MTFP1Q9UDX5 166 aa12.09□□□□□ -0.47
SNRPA1-207ENST00000559309 SESN1Q9Y6P5 492 aa12.09□□□□□ -0.47
SNRPA1-207ENST00000559309 TRBV6-7A0A0A0MS04 114 aa12.08□□□□□ -0.48
SNRPA1-207ENST00000559309 CENPVL3A0A0U1RRI6 287 aa12.08□□□□□ -0.48
SNRPA1-207ENST00000559309 A8MV72 311 aaPredicted RBP12.08□□□□□ -0.48
SNRPA1-207ENST00000559309 ODF3BA8MYP8 253 aa12.08□□□□□ -0.48
SNRPA1-207ENST00000559309 TOX4O94842 621 aa12.08□□□□□ -0.48
SNRPA1-207ENST00000559309 IGLV1-47P01700 117 aa12.08□□□□□ -0.48
SNRPA1-207ENST00000559309 SCTP09683 121 aa12.08□□□□□ -0.48
SNRPA1-207ENST00000559309 KIR2DS4P43632 304 aa12.08□□□□□ -0.48
SNRPA1-207ENST00000559309 KIR2DS1Q14954 304 aa12.08□□□□□ -0.48
SNRPA1-207ENST00000559309 PRAMEF5Q5TYX0 476 aa12.08□□□□□ -0.48
SNRPA1-207ENST00000559309 TRAPPC6BQ86SZ2 158 aa12.08□□□□□ -0.48
SNRPA1-207ENST00000559309 SNX29P2Q8IUI4 249 aa12.08□□□□□ -0.48
SNRPA1-207ENST00000559309 LYSMD2Q8IV50 215 aa12.08□□□□□ -0.48
SNRPA1-207ENST00000559309 LINC00311Q8N616 119 aa12.08□□□□□ -0.48
SNRPA1-207ENST00000559309 OR52I2Q8NH67 350 aa12.08□□□□□ -0.48
SNRPA1-207ENST00000559309 AJUBAQ96IF1 538 aa12.08□□□□□ -0.48
SNRPA1-207ENST00000559309 SRRQ9GZT4 340 aa12.08□□□□□ -0.48
SNRPA1-207ENST00000559309 TMEM133Q9H2Q1 129 aa12.08□□□□□ -0.48
SNRPA1-207ENST00000559309 RAB9BQ9NP90 201 aa12.08□□□□□ -0.48
SNRPA1-207ENST00000559309 GFOD1Q9NXC2 390 aa12.08□□□□□ -0.48
SNRPA1-207ENST00000559309 ONECUT1Q9UBC0 465 aa12.08□□□□□ -0.48
SNRPA1-207ENST00000559309 ZNF107Q9UII5 783 aaPredicted RBP12.08□□□□□ -0.48
SNRPA1-207ENST00000559309 ANXA10Q9UJ72 324 aa12.08□□□□□ -0.48
SNRPA1-207ENST00000559309 JPT1Q9UK76 154 aa12.08□□□□□ -0.48
SNRPA1-207ENST00000559309 KCNS2Q9ULS6 477 aa12.08□□□□□ -0.48
SNRPA1-207ENST00000559309 MRPS7Q9Y2R9 242 aaKnown RBP12.08□□□□□ -0.48
SNRPA1-207ENST00000559309 hCG_1809904A0A1W2PP81 198 aa12.07□□□□□ -0.48
SNRPA1-207ENST00000559309 A0A1W2PPE2 198 aa12.07□□□□□ -0.48
SNRPA1-207ENST00000559309 A0A1W2PR64 198 aa12.07□□□□□ -0.48
SNRPA1-207ENST00000559309 A0A1W2PRV1 198 aa12.07□□□□□ -0.48
SNRPA1-207ENST00000559309 ITGB1BP1O14713 200 aa12.07□□□□□ -0.48
SNRPA1-207ENST00000559309 FABP7O15540 132 aa12.07□□□□□ -0.48
SNRPA1-207ENST00000559309 SPINT2O43291 252 aa12.07□□□□□ -0.48
SNRPA1-207ENST00000559309 GSTT2P0CG29 244 aa12.07□□□□□ -0.48
SNRPA1-207ENST00000559309 GSTT2BP0CG30 244 aa12.07□□□□□ -0.48
SNRPA1-207ENST00000559309 OMGP23515 440 aa12.07□□□□□ -0.48
SNRPA1-207ENST00000559309 UBE2E1P51965 193 aa12.07□□□□□ -0.48
SNRPA1-207ENST00000559309 DGCR2P98153 550 aa12.07□□□□□ -0.48
SNRPA1-207ENST00000559309 ZNF45Q02386 682 aa12.07□□□□□ -0.48
SNRPA1-207ENST00000559309 IL18Q14116 193 aa12.07□□□□□ -0.48
SNRPA1-207ENST00000559309 STEAP3Q658P3 488 aa12.07□□□□□ -0.48
SNRPA1-207ENST00000559309 ZNF626Q68DY1 528 aa12.07□□□□□ -0.48
SNRPA1-207ENST00000559309 OR52W1Q6IF63 320 aa12.07□□□□□ -0.48
SNRPA1-207ENST00000559309 FAHD2BQ6P2I3 314 aaPredicted RBP12.07□□□□□ -0.48
SNRPA1-207ENST00000559309 C9orf139Q6ZV77 190 aa12.07□□□□□ -0.48
SNRPA1-207ENST00000559309 RFESDQ8TAC1 157 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms