RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 HIST1H1DP16402 221 aaKnown RBP9.24□□□□□ -0.93
SNX1-204ENST00000559061 RPL5P46777 297 aaKnown RBP9.24□□□□□ -0.93
SNX1-204ENST00000559061 ZNF134P52741 427 aa9.24□□□□□ -0.93
SNX1-204ENST00000559061 DIAPH2-AS1Q14236 149 aa9.24□□□□□ -0.93
SNX1-204ENST00000559061 HLA-DRB5Q30154 266 aa9.24□□□□□ -0.93
SNX1-204ENST00000559061 Q6ZTK2 550 aa9.24□□□□□ -0.93
SNX1-204ENST00000559061 ABHD12Q8N2K0 398 aa9.24□□□□□ -0.93
SNX1-204ENST00000559061 ZNF565Q8N9K5 539 aa9.24□□□□□ -0.93
SNX1-204ENST00000559061 BEND2Q8NDZ0 799 aa9.24□□□□□ -0.93
SNX1-204ENST00000559061 OR56B1Q8NGI3 324 aa9.24□□□□□ -0.93
SNX1-204ENST00000559061 OR13D1Q8NGV5 346 aa9.24□□□□□ -0.93
SNX1-204ENST00000559061 ZNF596Q8TC21 504 aa9.24□□□□□ -0.93
SNX1-204ENST00000559061 ZNF418Q8TF45 676 aaPredicted RBP9.24□□□□□ -0.93
SNX1-204ENST00000559061 ARL11Q969Q4 196 aa9.24□□□□□ -0.93
SNX1-204ENST00000559061 PARP12Q9H0J9 701 aaKnown RBP9.24□□□□□ -0.93
SNX1-204ENST00000559061 MEGF9Q9H1U4 602 aa9.24□□□□□ -0.93
SNX1-204ENST00000559061 TAF9BQ9HBM6 251 aa9.24□□□□□ -0.93
SNX1-204ENST00000559061 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.24□□□□□ -0.93
SNX1-204ENST00000559061 PLEKHJ1Q9NW61 149 aa9.24□□□□□ -0.93
SNX1-204ENST00000559061 RHBDL2Q9NX52 303 aa9.24□□□□□ -0.93
SNX1-204ENST00000559061 GFOD1Q9NXC2 390 aa9.24□□□□□ -0.93
SNX1-204ENST00000559061 TRAPPC2LQ9UL33 140 aa9.24□□□□□ -0.93
SNX1-204ENST00000559061 PSG11Q9UQ72 335 aa9.24□□□□□ -0.93
SNX1-204ENST00000559061 CEPT1Q9Y6K0 416 aa9.24□□□□□ -0.93
SNX1-204ENST00000559061 hCG_1809904A0A1W2PP81 198 aa9.23□□□□□ -0.93
SNX1-204ENST00000559061 A0A1W2PPE2 198 aa9.23□□□□□ -0.93
SNX1-204ENST00000559061 A0A1W2PR64 198 aa9.23□□□□□ -0.93
SNX1-204ENST00000559061 A0A1W2PRV1 198 aa9.23□□□□□ -0.93
SNX1-204ENST00000559061 SSX5O60225 188 aa9.23□□□□□ -0.93
SNX1-204ENST00000559061 PTHLHP12272 177 aa9.23□□□□□ -0.93
SNX1-204ENST00000559061 NFYBP25208 207 aa9.23□□□□□ -0.93
SNX1-204ENST00000559061 SCAND1P57086 179 aa9.23□□□□□ -0.93
SNX1-204ENST00000559061 BAMBIQ13145 260 aa9.23□□□□□ -0.93
SNX1-204ENST00000559061 HERPUD1Q15011 391 aa9.23□□□□□ -0.93
SNX1-204ENST00000559061 ZNF260Q3ZCT1 412 aa9.23□□□□□ -0.93
SNX1-204ENST00000559061 CLVS1Q8IUQ0 354 aaPredicted RBP9.23□□□□□ -0.93
SNX1-204ENST00000559061 OR10A7Q8NGE5 316 aa9.23□□□□□ -0.93
SNX1-204ENST00000559061 OR52L2PQ8NGH6 319 aa9.23□□□□□ -0.93
SNX1-204ENST00000559061 RAB3CQ96E17 227 aa9.23□□□□□ -0.93
SNX1-204ENST00000559061 RBMXL1Q96E39 390 aaKnown RBP9.23□□□□□ -0.93
SNX1-204ENST00000559061 CHIAQ9BZP6 476 aa9.23□□□□□ -0.93
SNX1-204ENST00000559061 ATG5Q9H1Y0 275 aa9.23□□□□□ -0.93
SNX1-204ENST00000559061 DCSTAMPQ9H295 470 aa9.23□□□□□ -0.93
SNX1-204ENST00000559061 Q9N2K0 584 aa9.23□□□□□ -0.93
SNX1-204ENST00000559061 SPATA2Q9UM82 520 aa9.23□□□□□ -0.93
SNX1-204ENST00000559061 TBL2Q9Y4P3 447 aaKnown RBP9.23□□□□□ -0.93
SNX1-204ENST00000559061 ETV7Q9Y603 341 aa9.23□□□□□ -0.93
SNX1-204ENST00000559061 H3BMQ9 156 aa9.22□□□□□ -0.93
SNX1-204ENST00000559061 J3QR06 171 aa9.22□□□□□ -0.93
SNX1-204ENST00000559061 EIF4EP06730 217 aaKnown RBP9.22□□□□□ -0.93
SNX1-204ENST00000559061 RNASE1P07998 156 aaKnown RBP9.22□□□□□ -0.93
SNX1-204ENST00000559061 FCGR3AP08637 254 aa9.22□□□□□ -0.93
SNX1-204ENST00000559061 SCTP09683 121 aa9.22□□□□□ -0.93
SNX1-204ENST00000559061 GZMHP20718 246 aa9.22□□□□□ -0.93
SNX1-204ENST00000559061 GNG10P50151 68 aa9.22□□□□□ -0.93
SNX1-204ENST00000559061 RELBQ01201 579 aa9.22□□□□□ -0.93
SNX1-204ENST00000559061 SCGB2A2Q13296 93 aa9.22□□□□□ -0.93
SNX1-204ENST00000559061 CCBE1Q6UXH8 406 aaPredicted RBP9.22□□□□□ -0.93
SNX1-204ENST00000559061 DTX3Q8N9I9 347 aa9.22□□□□□ -0.93
SNX1-204ENST00000559061 OR10V1Q8NGI7 309 aa9.22□□□□□ -0.93
SNX1-204ENST00000559061 OR52M1Q8NGK5 317 aa9.22□□□□□ -0.93
SNX1-204ENST00000559061 MAFIPQ8WZ33 124 aa9.22□□□□□ -0.93
SNX1-204ENST00000559061 C12orf4Q9NQ89 552 aa9.22□□□□□ -0.93
SNX1-204ENST00000559061 TNFRSF19Q9NS68 423 aa9.22□□□□□ -0.93
SNX1-204ENST00000559061 ABRACLQ9P1F3 81 aa9.22□□□□□ -0.93
SNX1-204ENST00000559061 ZNF230Q9UIE0 474 aaPredicted RBP9.22□□□□□ -0.93
SNX1-204ENST00000559061 ANK2Q01484 3957 aa9.22□□□□□ -0.93
SNX1-204ENST00000559061 A0A075B6Q4 140 aa9.21□□□□□ -0.94
SNX1-204ENST00000559061 A0A1W2PPI3 338 aa9.21□□□□□ -0.94
SNX1-204ENST00000559061 TMEM235A6NFC5 223 aa9.21□□□□□ -0.94
SNX1-204ENST00000559061 VGLL3A8MV65 326 aa9.21□□□□□ -0.94
SNX1-204ENST00000559061 BUB1B-PAK6H3BSN5 160 aa9.21□□□□□ -0.94
SNX1-204ENST00000559061 H3BUI4 141 aa9.21□□□□□ -0.94
SNX1-204ENST00000559061 SDCBPO00560 298 aaPredicted RBP9.21□□□□□ -0.94
SNX1-204ENST00000559061 CHST1O43916 411 aa9.21□□□□□ -0.94
SNX1-204ENST00000559061 FBP1P09467 338 aa9.21□□□□□ -0.94
SNX1-204ENST00000559061 RAB13P51153 203 aa9.21□□□□□ -0.94
SNX1-204ENST00000559061 HLA-DRB3P79483 266 aa9.21□□□□□ -0.94
SNX1-204ENST00000559061 DYNC1I2Q13409 638 aaKnown RBP9.21□□□□□ -0.94
SNX1-204ENST00000559061 SSX2Q16385 188 aa9.21□□□□□ -0.94
SNX1-204ENST00000559061 PLA1AQ53H76 456 aa9.21□□□□□ -0.94
SNX1-204ENST00000559061 CT45A1Q5HYN5 189 aa9.21□□□□□ -0.94
SNX1-204ENST00000559061 C6orf183Q5T699 404 aa9.21□□□□□ -0.94
SNX1-204ENST00000559061 MINOS1Q5TGZ0 78 aa9.21□□□□□ -0.94
SNX1-204ENST00000559061 OR52W1Q6IF63 320 aa9.21□□□□□ -0.94
SNX1-204ENST00000559061 ZNF554Q86TJ5 538 aa9.21□□□□□ -0.94
SNX1-204ENST00000559061 ODF3L1Q8IXM7 274 aa9.21□□□□□ -0.94
SNX1-204ENST00000559061 IZUMO1Q8IYV9 350 aa9.21□□□□□ -0.94
SNX1-204ENST00000559061 PRR18Q8N4B5 295 aa9.21□□□□□ -0.94
SNX1-204ENST00000559061 LINC00311Q8N616 119 aa9.21□□□□□ -0.94
SNX1-204ENST00000559061 OR9G1Q8NH87 305 aa9.21□□□□□ -0.94
SNX1-204ENST00000559061 CT45A3Q8NHU0 189 aa9.21□□□□□ -0.94
SNX1-204ENST00000559061 DYNC2LI1Q8TCX1 351 aa9.21□□□□□ -0.94
SNX1-204ENST00000559061 FAM216AQ8WUB2 273 aa9.21□□□□□ -0.94
SNX1-204ENST00000559061 NUDCD2Q8WVJ2 157 aa9.21□□□□□ -0.94
SNX1-204ENST00000559061 ST6GALNAC6Q969X2 333 aa9.21□□□□□ -0.94
SNX1-204ENST00000559061 ISOC1Q96CN7 298 aa9.21□□□□□ -0.94
SNX1-204ENST00000559061 CMSS1Q9BQ75 279 aaKnown RBP9.21□□□□□ -0.94
SNX1-204ENST00000559061 C19orf24Q9BVV8 132 aa9.21□□□□□ -0.94
SNX1-204ENST00000559061 ABCG5Q9H222 651 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms