RNA–Protein interactions for RNA: ENST00000559002.5

CHRNA3-204, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best)

Gene CHRNA3, Length 333 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-204ENST00000559002 GVQW1Q8N7I0 195 aa5.42□□□□□ -1.54
CHRNA3-204ENST00000559002 BEST4Q8NFU0 473 aa5.42□□□□□ -1.54
CHRNA3-204ENST00000559002 OR10A7Q8NGE5 316 aa5.42□□□□□ -1.54
CHRNA3-204ENST00000559002 OR13D1Q8NGV5 346 aa5.42□□□□□ -1.54
CHRNA3-204ENST00000559002 OR52I2Q8NH67 350 aa5.42□□□□□ -1.54
CHRNA3-204ENST00000559002 OR1L1Q8NH94 360 aa5.42□□□□□ -1.54
CHRNA3-204ENST00000559002 GPX8Q8TED1 209 aa5.42□□□□□ -1.54
CHRNA3-204ENST00000559002 SMIM4Q8WVI0 70 aa5.42□□□□□ -1.54
CHRNA3-204ENST00000559002 FCAMRQ8WWV6 532 aa5.42□□□□□ -1.54
CHRNA3-204ENST00000559002 IL1F10Q8WWZ1 152 aa5.42□□□□□ -1.54
CHRNA3-204ENST00000559002 S100ZQ8WXG8 99 aa5.42□□□□□ -1.54
CHRNA3-204ENST00000559002 GALMQ96C23 342 aa5.42□□□□□ -1.54
CHRNA3-204ENST00000559002 KIRREL1Q96J84 757 aa5.42□□□□□ -1.54
CHRNA3-204ENST00000559002 ABHD1Q96SE0 405 aa5.42□□□□□ -1.54
CHRNA3-204ENST00000559002 OCSTAMPQ9BR26 566 aa5.42□□□□□ -1.54
CHRNA3-204ENST00000559002 SIRPDQ9H106 197 aa5.42□□□□□ -1.54
CHRNA3-204ENST00000559002 HEXA-AS1Q9H8Q6 139 aa5.42□□□□□ -1.54
CHRNA3-204ENST00000559002 SIRT7Q9NRC8 400 aa5.42□□□□□ -1.54
CHRNA3-204ENST00000559002 YAE1D1Q9NRH1 226 aa5.42□□□□□ -1.54
CHRNA3-204ENST00000559002 IDI2-AS1Q9NZ38 188 aa5.42□□□□□ -1.54
CHRNA3-204ENST00000559002 GNG12Q9UBI6 72 aa5.42□□□□□ -1.54
CHRNA3-204ENST00000559002 SESN1Q9Y6P5 492 aa5.42□□□□□ -1.54
CHRNA3-204ENST00000559002 V9GYH0 126 aa5.42□□□□□ -1.54
CHRNA3-204ENST00000559002 NSD1Q96L73 2696 aaPredicted RBP5.42□□□□□ -1.54
CHRNA3-204ENST00000559002 HIVEP2P31629 2446 aa5.42□□□□□ -1.54
CHRNA3-204ENST00000559002 ANK3Q12955 4377 aaKnown RBP5.41□□□□□ -1.54
CHRNA3-204ENST00000559002 ABCA1O95477 2261 aa5.41□□□□□ -1.54
CHRNA3-204ENST00000559002 SONP18583 2426 aaKnown RBP5.41□□□□□ -1.54
CHRNA3-204ENST00000559002 IGHV3-43A0A0B4J1X8 118 aa5.41□□□□□ -1.54
CHRNA3-204ENST00000559002 FAM172BPA6NC97 362 aa5.41□□□□□ -1.54
CHRNA3-204ENST00000559002 A8MV72 311 aaPredicted RBP5.41□□□□□ -1.54
CHRNA3-204ENST00000559002 NPIPB11E5RHQ5 1161 aa5.41□□□□□ -1.54
CHRNA3-204ENST00000559002 C15orf65H3BRN8 121 aa5.41□□□□□ -1.54
CHRNA3-204ENST00000559002 F2RL2O00254 374 aa5.41□□□□□ -1.54
CHRNA3-204ENST00000559002 SDCBPO00560 298 aaPredicted RBP5.41□□□□□ -1.54
CHRNA3-204ENST00000559002 BET1O15155 118 aa5.41□□□□□ -1.54
CHRNA3-204ENST00000559002 CTDSPLO15194 276 aa5.41□□□□□ -1.54
CHRNA3-204ENST00000559002 GSTZ1O43708 216 aaPredicted RBP5.41□□□□□ -1.54
CHRNA3-204ENST00000559002 RBBP9O75884 186 aa5.41□□□□□ -1.54
CHRNA3-204ENST00000559002 RGS11O94810 467 aa5.41□□□□□ -1.54
CHRNA3-204ENST00000559002 LY6G6DO95868 133 aa5.41□□□□□ -1.54
CHRNA3-204ENST00000559002 SCTP09683 121 aa5.41□□□□□ -1.54
CHRNA3-204ENST00000559002 CTXN2P0C2S0 81 aa5.41□□□□□ -1.54
CHRNA3-204ENST00000559002 CGB3P0DN86 165 aa5.41□□□□□ -1.54
CHRNA3-204ENST00000559002 CGB7P0DN87 165 aa5.41□□□□□ -1.54
CHRNA3-204ENST00000559002 IGHV3-43DP0DP04 118 aa5.41□□□□□ -1.54
CHRNA3-204ENST00000559002 MMP9P14780 707 aa5.41□□□□□ -1.54
CHRNA3-204ENST00000559002 PRTN3P24158 256 aa5.41□□□□□ -1.54
CHRNA3-204ENST00000559002 COX7A1P24310 79 aa5.41□□□□□ -1.54
CHRNA3-204ENST00000559002 FPR2P25090 351 aa5.41□□□□□ -1.54
CHRNA3-204ENST00000559002 INPP1P49441 399 aa5.41□□□□□ -1.54
CHRNA3-204ENST00000559002 TAS2R46P59540 309 aa5.41□□□□□ -1.54
CHRNA3-204ENST00000559002 DGCR2P98153 550 aa5.41□□□□□ -1.54
CHRNA3-204ENST00000559002 ZNF45Q02386 682 aa5.41□□□□□ -1.54
CHRNA3-204ENST00000559002 SSBP1Q04837 148 aaKnown RBP5.41□□□□□ -1.54
CHRNA3-204ENST00000559002 KRTAP1-1Q07627 177 aa5.41□□□□□ -1.54
CHRNA3-204ENST00000559002 CR1LQ2VPA4 569 aa5.41□□□□□ -1.54
CHRNA3-204ENST00000559002 TRIQKQ629K1 86 aa5.41□□□□□ -1.54
CHRNA3-204ENST00000559002 STEAP3Q658P3 488 aa5.41□□□□□ -1.54
CHRNA3-204ENST00000559002 NCR3LG1Q68D85 454 aa5.41□□□□□ -1.54
CHRNA3-204ENST00000559002 Q6ZPA2 131 aa5.41□□□□□ -1.54
CHRNA3-204ENST00000559002 Q6ZS49 121 aa5.41□□□□□ -1.54
CHRNA3-204ENST00000559002 Q8N402 240 aa5.41□□□□□ -1.54
CHRNA3-204ENST00000559002 Q8N7P7 452 aa5.41□□□□□ -1.54
CHRNA3-204ENST00000559002 OR10V1Q8NGI7 309 aa5.41□□□□□ -1.54
CHRNA3-204ENST00000559002 OR52M1Q8NGK5 317 aa5.41□□□□□ -1.54
CHRNA3-204ENST00000559002 OR4A4PQ8NGN8 299 aa5.41□□□□□ -1.54
CHRNA3-204ENST00000559002 LHX4Q969G2 390 aa5.41□□□□□ -1.54
CHRNA3-204ENST00000559002 TBX15Q96SF7 602 aa5.41□□□□□ -1.54
CHRNA3-204ENST00000559002 SMR3AQ99954 134 aa5.41□□□□□ -1.54
CHRNA3-204ENST00000559002 SOSTQ9BQB4 213 aa5.41□□□□□ -1.54
CHRNA3-204ENST00000559002 GINS4Q9BRT9 223 aa5.41□□□□□ -1.54
CHRNA3-204ENST00000559002 SUCNR1Q9BXA5 334 aa5.41□□□□□ -1.54
CHRNA3-204ENST00000559002 TMPRSS13Q9BYE2 586 aa5.41□□□□□ -1.54
CHRNA3-204ENST00000559002 WDR12Q9GZL7 423 aaKnown RBP5.41□□□□□ -1.54
CHRNA3-204ENST00000559002 TMEM133Q9H2Q1 129 aa5.41□□□□□ -1.54
CHRNA3-204ENST00000559002 LINC00574Q9H8X3 128 aa5.41□□□□□ -1.54
CHRNA3-204ENST00000559002 UNKLQ9H9P5 680 aaKnown RBP5.41□□□□□ -1.54
CHRNA3-204ENST00000559002 OR2S2Q9NQN1 319 aa5.41□□□□□ -1.54
CHRNA3-204ENST00000559002 GFOD1Q9NXC2 390 aa5.41□□□□□ -1.54
CHRNA3-204ENST00000559002 SLC23A1Q9UHI7 598 aa5.41□□□□□ -1.54
CHRNA3-204ENST00000559002 ANXA10Q9UJ72 324 aa5.41□□□□□ -1.54
CHRNA3-204ENST00000559002 JPT1Q9UK76 154 aa5.41□□□□□ -1.54
CHRNA3-204ENST00000559002 TEP1Q99973 2627 aaKnown RBP5.41□□□□□ -1.54
CHRNA3-204ENST00000559002 WNK2Q9Y3S1 2297 aa5.4□□□□□ -1.54
CHRNA3-204ENST00000559002 CR1P17927 2039 aa5.4□□□□□ -1.54
CHRNA3-204ENST00000559002 IGKV1D-8A0A087WSZ0 117 aa5.4□□□□□ -1.54
CHRNA3-204ENST00000559002 TRAV40A0A0B4J280 105 aa5.4□□□□□ -1.54
CHRNA3-204ENST00000559002 ZNF736B4DX44 427 aaPredicted RBP5.4□□□□□ -1.54
CHRNA3-204ENST00000559002 TOR1AO14656 332 aa5.4□□□□□ -1.54
CHRNA3-204ENST00000559002 MMP23AO75900 390 aa5.4□□□□□ -1.54
CHRNA3-204ENST00000559002 DIRAS3O95661 229 aa5.4□□□□□ -1.54
CHRNA3-204ENST00000559002 CSF1P09603 554 aa5.4□□□□□ -1.54
CHRNA3-204ENST00000559002 GSTT2P0CG29 244 aa5.4□□□□□ -1.54
CHRNA3-204ENST00000559002 GSTT2BP0CG30 244 aa5.4□□□□□ -1.54
CHRNA3-204ENST00000559002 HOXB4P17483 251 aaPredicted RBP5.4□□□□□ -1.54
CHRNA3-204ENST00000559002 ZBTB25P24278 435 aa5.4□□□□□ -1.54
CHRNA3-204ENST00000559002 HLA-DMAP28067 261 aa5.4□□□□□ -1.54
CHRNA3-204ENST00000559002 PPP1CCP36873 323 aaKnown RBP5.4□□□□□ -1.54
CHRNA3-204ENST00000559002 SRP14P37108 136 aaKnown RBP5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms