RNA–Protein interactions for RNA: ENST00000558989.1

SPG11-214, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 1,816 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-214ENST00000558989 MGST3O14880 152 aa7.85□□□□□ -1.15
SPG11-214ENST00000558989 MMP23AO75900 390 aa7.85□□□□□ -1.15
SPG11-214ENST00000558989 SPDEFO95238 335 aa7.85□□□□□ -1.15
SPG11-214ENST00000558989 ARG1P05089 322 aa7.85□□□□□ -1.15
SPG11-214ENST00000558989 FBP1P09467 338 aa7.85□□□□□ -1.15
SPG11-214ENST00000558989 ZNF728P0DKX0 622 aa7.85□□□□□ -1.15
SPG11-214ENST00000558989 PTGFRP43088 359 aa7.85□□□□□ -1.15
SPG11-214ENST00000558989 PTTG1IPP53801 180 aa7.85□□□□□ -1.15
SPG11-214ENST00000558989 SPHARQ15513 63 aa7.85□□□□□ -1.15
SPG11-214ENST00000558989 SLC22A6Q4U2R8 563 aa7.85□□□□□ -1.15
SPG11-214ENST00000558989 PAN3Q58A45 887 aaKnown RBP7.85□□□□□ -1.15
SPG11-214ENST00000558989 AWAT1Q58HT5 328 aa7.85□□□□□ -1.15
SPG11-214ENST00000558989 LIPKQ5VXJ0 399 aa7.85□□□□□ -1.15
SPG11-214ENST00000558989 ZNF529Q6P280 563 aa7.85□□□□□ -1.15
SPG11-214ENST00000558989 Q6P435 159 aa7.85□□□□□ -1.15
SPG11-214ENST00000558989 RTN4RL2Q86UN3 420 aa7.85□□□□□ -1.15
SPG11-214ENST00000558989 ZNF714Q96N38 554 aa7.85□□□□□ -1.15
SPG11-214ENST00000558989 ANKRD60Q9BZ19 345 aa7.85□□□□□ -1.15
SPG11-214ENST00000558989 METTL9Q9H1A3 318 aa7.85□□□□□ -1.15
SPG11-214ENST00000558989 PPIL3Q9H2H8 161 aaKnown RBP7.85□□□□□ -1.15
SPG11-214ENST00000558989 HEXA-AS1Q9H8Q6 139 aa7.85□□□□□ -1.15
SPG11-214ENST00000558989 SPACA1Q9HBV2 294 aa7.85□□□□□ -1.15
SPG11-214ENST00000558989 SLC23A1Q9UHI7 598 aa7.85□□□□□ -1.15
SPG11-214ENST00000558989 PIN1P1O15428 100 aa7.85□□□□□ -1.15
SPG11-214ENST00000558989 ALX3O95076 343 aa7.85□□□□□ -1.15
SPG11-214ENST00000558989 HKR1P10072 659 aa7.85□□□□□ -1.15
SPG11-214ENST00000558989 IGFBP3P17936 291 aaPredicted RBP7.85□□□□□ -1.15
SPG11-214ENST00000558989 MDKP21741 143 aaPredicted RBP7.85□□□□□ -1.15
SPG11-214ENST00000558989 CFPP27918 469 aa7.85□□□□□ -1.15
SPG11-214ENST00000558989 IER3P46695 156 aa7.85□□□□□ -1.15
SPG11-214ENST00000558989 DLX6P56179 175 aa7.85□□□□□ -1.15
SPG11-214ENST00000558989 SLC35A2P78381 396 aa7.85□□□□□ -1.15
SPG11-214ENST00000558989 TAF9Q16594 264 aa7.85□□□□□ -1.15
SPG11-214ENST00000558989 LTC4SQ16873 150 aa7.85□□□□□ -1.15
SPG11-214ENST00000558989 PLAC9Q5JTB6 97 aa7.85□□□□□ -1.15
SPG11-214ENST00000558989 ATAD3CQ5T2N8 411 aa7.85□□□□□ -1.15
SPG11-214ENST00000558989 PRAMEF5Q5TYX0 476 aa7.85□□□□□ -1.15
SPG11-214ENST00000558989 SAXO1Q8IYX7 474 aa7.85□□□□□ -1.15
SPG11-214ENST00000558989 TBC1D15Q8TC07 691 aa7.85□□□□□ -1.15
SPG11-214ENST00000558989 SSMEM1Q8WWF3 244 aa7.85□□□□□ -1.15
SPG11-214ENST00000558989 CPNE2Q96FN4 548 aaPredicted RBP7.85□□□□□ -1.15
SPG11-214ENST00000558989 DERL3Q96Q80 235 aa7.85□□□□□ -1.15
SPG11-214ENST00000558989 ZNRD1Q9P1U0 126 aa7.85□□□□□ -1.15
SPG11-214ENST00000558989 UBQLN2Q9UHD9 624 aa7.85□□□□□ -1.15
SPG11-214ENST00000558989 ST3GAL6Q9Y274 331 aa7.85□□□□□ -1.15
SPG11-214ENST00000558989 MRPS28Q9Y2Q9 187 aaKnown RBP7.85□□□□□ -1.15
SPG11-214ENST00000558989 BTBD17A6NE02 478 aa7.84□□□□□ -1.15
SPG11-214ENST00000558989 C17orf98A8MV24 154 aa7.84□□□□□ -1.15
SPG11-214ENST00000558989 H3BUX3 64 aa7.84□□□□□ -1.15
SPG11-214ENST00000558989 OR7C1O76099 320 aaPredicted RBP7.84□□□□□ -1.15
SPG11-214ENST00000558989 IGHV3-7P01780 117 aa7.84□□□□□ -1.15
SPG11-214ENST00000558989 IGHV1-8P0DP01 117 aa7.84□□□□□ -1.15
SPG11-214ENST00000558989 JUNBP17275 347 aaPredicted RBP7.84□□□□□ -1.15
SPG11-214ENST00000558989 VHLP40337 213 aa7.84□□□□□ -1.15
SPG11-214ENST00000558989 GLP1RP43220 463 aa7.84□□□□□ -1.15
SPG11-214ENST00000558989 HSPA13P48723 471 aa7.84□□□□□ -1.15
SPG11-214ENST00000558989 RAB13P51153 203 aa7.84□□□□□ -1.15
SPG11-214ENST00000558989 P2RX3P56373 397 aa7.84□□□□□ -1.15
SPG11-214ENST00000558989 ACSM1Q08AH1 577 aa7.84□□□□□ -1.15
SPG11-214ENST00000558989 ACSM3Q53FZ2 586 aa7.84□□□□□ -1.15
SPG11-214ENST00000558989 RBM48Q5RL73 367 aaKnown RBP7.84□□□□□ -1.15
SPG11-214ENST00000558989 AWAT2Q6E213 333 aa7.84□□□□□ -1.15
SPG11-214ENST00000558989 GLIPR1L1Q6UWM5 242 aa7.84□□□□□ -1.15
SPG11-214ENST00000558989 TMEM182Q6ZP80 229 aaPredicted RBP7.84□□□□□ -1.15
SPG11-214ENST00000558989 PXT1Q8NFP0 134 aa7.84□□□□□ -1.15
SPG11-214ENST00000558989 NEK7Q8TDX7 302 aa7.84□□□□□ -1.15
SPG11-214ENST00000558989 COQ2Q96H96 371 aa7.84□□□□□ -1.15
SPG11-214ENST00000558989 AJUBAQ96IF1 538 aa7.84□□□□□ -1.15
SPG11-214ENST00000558989 CDCA4Q9BXL8 241 aa7.84□□□□□ -1.15
SPG11-214ENST00000558989 SLITRK2Q9H156 845 aa7.84□□□□□ -1.15
SPG11-214ENST00000558989 BANF2Q9H503 90 aa7.84□□□□□ -1.15
SPG11-214ENST00000558989 OR6C3Q9NZP0 311 aa7.84□□□□□ -1.15
SPG11-214ENST00000558989 LSM2Q9Y333 95 aaKnown RBP7.84□□□□□ -1.15
SPG11-214ENST00000558989 TRGV10A0A0A0MS01 117 aa7.83□□□□□ -1.16
SPG11-214ENST00000558989 TRBV5-7A0A0A0MS05 114 aa7.83□□□□□ -1.16
SPG11-214ENST00000558989 TRAV24A0A0B4J272 114 aa7.83□□□□□ -1.16
SPG11-214ENST00000558989 GEMIN2O14893 280 aaKnown RBP7.83□□□□□ -1.16
SPG11-214ENST00000558989 GPR137BO60478 399 aa7.83□□□□□ -1.16
SPG11-214ENST00000558989 ALDOBP05062 364 aa7.83□□□□□ -1.16
SPG11-214ENST00000558989 CRHBPP24387 322 aa7.83□□□□□ -1.16
SPG11-214ENST00000558989 CDK2P24941 298 aa7.83□□□□□ -1.16
SPG11-214ENST00000558989 NFYBP25208 207 aa7.83□□□□□ -1.16
SPG11-214ENST00000558989 GDNFP39905 211 aa7.83□□□□□ -1.16
SPG11-214ENST00000558989 RPS25P62851 125 aaKnown RBP7.83□□□□□ -1.16
SPG11-214ENST00000558989 FOXL1Q12952 345 aa7.83□□□□□ -1.16
SPG11-214ENST00000558989 FAM189A2Q15884 450 aa7.83□□□□□ -1.16
SPG11-214ENST00000558989 CEACAM19Q7Z692 300 aa7.83□□□□□ -1.16
SPG11-214ENST00000558989 DYNAPQ8N1N2 210 aa7.83□□□□□ -1.16
SPG11-214ENST00000558989 OSR2Q8N2R0 312 aa7.83□□□□□ -1.16
SPG11-214ENST00000558989 OR56B1Q8NGI3 324 aa7.83□□□□□ -1.16
SPG11-214ENST00000558989 OR4D6Q8NGJ1 314 aa7.83□□□□□ -1.16
SPG11-214ENST00000558989 UBALD1Q8TB05 177 aa7.83□□□□□ -1.16
SPG11-214ENST00000558989 PLPPR1Q8TBJ4 325 aa7.83□□□□□ -1.16
SPG11-214ENST00000558989 UFD1Q92890 307 aa7.83□□□□□ -1.16
SPG11-214ENST00000558989 ST6GALNAC6Q969X2 333 aa7.83□□□□□ -1.16
SPG11-214ENST00000558989 FAM46BQ96A09 425 aa7.83□□□□□ -1.16
SPG11-214ENST00000558989 CYYR1Q96J86 154 aa7.83□□□□□ -1.16
SPG11-214ENST00000558989 DPAGT1Q9H3H5 408 aa7.83□□□□□ -1.16
SPG11-214ENST00000558989 SRD5A3Q9H8P0 318 aa7.83□□□□□ -1.16
SPG11-214ENST00000558989 NUDT15Q9NV35 164 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms