RNA–Protein interactions for RNA: ENST00000558867.1

CDC42BPB-203, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-203ENST00000558867 ACTBP60709 375 aa12.99□□□□□ -0.33
CDC42BPB-203ENST00000558867 GMFBP60983 142 aa12.99□□□□□ -0.33
CDC42BPB-203ENST00000558867 RPS27AP62979 156 aaKnown RBP12.99□□□□□ -0.33
CDC42BPB-203ENST00000558867 ARL6IP1Q15041 203 aa12.99□□□□□ -0.33
CDC42BPB-203ENST00000558867 ZNF260Q3ZCT1 412 aa12.99□□□□□ -0.33
CDC42BPB-203ENST00000558867 PLA1AQ53H76 456 aa12.99□□□□□ -0.33
CDC42BPB-203ENST00000558867 ARSJQ5FYB0 599 aaPredicted RBP12.99□□□□□ -0.33
CDC42BPB-203ENST00000558867 PLET1Q6UQ28 207 aa12.99□□□□□ -0.33
CDC42BPB-203ENST00000558867 WDR86Q86TI4 376 aa12.99□□□□□ -0.33
CDC42BPB-203ENST00000558867 LYG1Q8N1E2 194 aa12.99□□□□□ -0.33
CDC42BPB-203ENST00000558867 AQP3Q92482 292 aa12.99□□□□□ -0.33
CDC42BPB-203ENST00000558867 MRPS24Q96EL2 167 aaKnown RBP12.99□□□□□ -0.33
CDC42BPB-203ENST00000558867 BORCS8Q96FH0 119 aa12.99□□□□□ -0.33
CDC42BPB-203ENST00000558867 NEDD4LQ96PU5 975 aa12.99□□□□□ -0.33
CDC42BPB-203ENST00000558867 HIST1H2AAQ96QV6 131 aa12.99□□□□□ -0.33
CDC42BPB-203ENST00000558867 TMEM59Q9BXS4 323 aa12.99□□□□□ -0.33
CDC42BPB-203ENST00000558867 MMP28Q9H239 520 aa12.99□□□□□ -0.33
CDC42BPB-203ENST00000558867 KMT2CQ8NEZ4 4911 aaKnown RBP12.99□□□□□ -0.33
CDC42BPB-203ENST00000558867 H3BUI4 141 aa12.98□□□□□ -0.33
CDC42BPB-203ENST00000558867 PFDN1O60925 122 aa12.98□□□□□ -0.33
CDC42BPB-203ENST00000558867 CA11O75493 328 aa12.98□□□□□ -0.33
CDC42BPB-203ENST00000558867 RBBP9O75884 186 aa12.98□□□□□ -0.33
CDC42BPB-203ENST00000558867 MPIG6BO95866 241 aa12.98□□□□□ -0.33
CDC42BPB-203ENST00000558867 LPLP06858 475 aa12.98□□□□□ -0.33
CDC42BPB-203ENST00000558867 ACAA1P09110 424 aaPredicted RBP12.98□□□□□ -0.33
CDC42BPB-203ENST00000558867 GSTP1P09211 210 aaKnown RBP12.98□□□□□ -0.33
CDC42BPB-203ENST00000558867 GABRA2P47869 451 aa12.98□□□□□ -0.33
CDC42BPB-203ENST00000558867 MTCP1P56278 107 aa12.98□□□□□ -0.33
CDC42BPB-203ENST00000558867 RNF144BQ7Z419 303 aa12.98□□□□□ -0.33
CDC42BPB-203ENST00000558867 SAXO1Q8IYX7 474 aa12.98□□□□□ -0.33
CDC42BPB-203ENST00000558867 CADM3Q8N126 398 aa12.98□□□□□ -0.33
CDC42BPB-203ENST00000558867 Q8NFD4 153 aa12.98□□□□□ -0.33
CDC42BPB-203ENST00000558867 OR56B1Q8NGI3 324 aa12.98□□□□□ -0.33
CDC42BPB-203ENST00000558867 OR10R2Q8NGX6 335 aa12.98□□□□□ -0.33
CDC42BPB-203ENST00000558867 ANGPTL6Q8NI99 470 aa12.98□□□□□ -0.33
CDC42BPB-203ENST00000558867 TNFAIP8L1Q8WVP5 186 aa12.98□□□□□ -0.33
CDC42BPB-203ENST00000558867 CREB3L1Q96BA8 519 aa12.98□□□□□ -0.33
CDC42BPB-203ENST00000558867 SEH1LQ96EE3 360 aa12.98□□□□□ -0.33
CDC42BPB-203ENST00000558867 SPACA5Q96QH8 159 aa12.98□□□□□ -0.33
CDC42BPB-203ENST00000558867 PCDHB16Q9NRJ7 776 aa12.98□□□□□ -0.33
CDC42BPB-203ENST00000558867 NLKQ9UBE8 527 aa12.98□□□□□ -0.33
CDC42BPB-203ENST00000558867 PITPNC1Q9UKF7 332 aa12.98□□□□□ -0.33
CDC42BPB-203ENST00000558867 TENM3Q9P273 2699 aa12.97□□□□□ -0.33
CDC42BPB-203ENST00000558867 PQLC2LA1A4F0 135 aa12.97□□□□□ -0.33
CDC42BPB-203ENST00000558867 FOXI3A8MTJ6 420 aaPredicted RBP12.97□□□□□ -0.33
CDC42BPB-203ENST00000558867 AKR7A2O43488 359 aa12.97□□□□□ -0.33
CDC42BPB-203ENST00000558867 CD28P10747 220 aa12.97□□□□□ -0.33
CDC42BPB-203ENST00000558867 AMY2BP19961 511 aa12.97□□□□□ -0.33
CDC42BPB-203ENST00000558867 PNLIPRP3Q17RR3 467 aa12.97□□□□□ -0.33
CDC42BPB-203ENST00000558867 CEACAM21Q3KPI0 293 aa12.97□□□□□ -0.33
CDC42BPB-203ENST00000558867 PLCXD3Q63HM9 321 aa12.97□□□□□ -0.33
CDC42BPB-203ENST00000558867 OR10K2Q6IF99 312 aa12.97□□□□□ -0.33
CDC42BPB-203ENST00000558867 FAM185AQ8N0U4 392 aa12.97□□□□□ -0.33
CDC42BPB-203ENST00000558867 TMEM104Q8NE00 496 aa12.97□□□□□ -0.33
CDC42BPB-203ENST00000558867 OR5A2Q8NGI9 324 aa12.97□□□□□ -0.33
CDC42BPB-203ENST00000558867 GAFA1Q96PS6 74 aa12.97□□□□□ -0.33
CDC42BPB-203ENST00000558867 S100A13Q99584 98 aa12.97□□□□□ -0.33
CDC42BPB-203ENST00000558867 PRSS22Q9GZN4 317 aa12.97□□□□□ -0.33
CDC42BPB-203ENST00000558867 METTL9Q9H1A3 318 aa12.97□□□□□ -0.33
CDC42BPB-203ENST00000558867 KLK11Q9UBX7 282 aa12.97□□□□□ -0.33
CDC42BPB-203ENST00000558867 IGKV1-27A0A075B6S5 117 aa12.96□□□□□ -0.33
CDC42BPB-203ENST00000558867 LINC00854A0A1B0GVQ3 168 aa12.96□□□□□ -0.33
CDC42BPB-203ENST00000558867 OR5B21A6NL26 309 aa12.96□□□□□ -0.33
CDC42BPB-203ENST00000558867 OR2AT4A6NND4 320 aa12.96□□□□□ -0.33
CDC42BPB-203ENST00000558867 TRAPPC2P0DI81 140 aa12.96□□□□□ -0.33
CDC42BPB-203ENST00000558867 TRAPPC2BP0DI82 140 aa12.96□□□□□ -0.33
CDC42BPB-203ENST00000558867 SELLP14151 372 aa12.96□□□□□ -0.33
CDC42BPB-203ENST00000558867 GLRA1P23415 457 aa12.96□□□□□ -0.33
CDC42BPB-203ENST00000558867 FAUP35544 74 aaKnown RBP12.96□□□□□ -0.33
CDC42BPB-203ENST00000558867 MOGAT2Q3SYC2 334 aa12.96□□□□□ -0.33
CDC42BPB-203ENST00000558867 DEFB121Q5J5C9 76 aa12.96□□□□□ -0.33
CDC42BPB-203ENST00000558867 MOB3CQ70IA8 216 aa12.96□□□□□ -0.33
CDC42BPB-203ENST00000558867 ZDHHC23Q8IYP9 409 aa12.96□□□□□ -0.33
CDC42BPB-203ENST00000558867 TMEM185AQ8NFB2 350 aa12.96□□□□□ -0.33
CDC42BPB-203ENST00000558867 PIGCQ92535 297 aa12.96□□□□□ -0.33
CDC42BPB-203ENST00000558867 OCSTAMPQ9BR26 566 aa12.96□□□□□ -0.33
CDC42BPB-203ENST00000558867 WDR13Q9H1Z4 485 aa12.96□□□□□ -0.33
CDC42BPB-203ENST00000558867 ANAPC10Q9UM13 185 aa12.96□□□□□ -0.33
CDC42BPB-203ENST00000558867 NUBP2Q9Y5Y2 271 aa12.96□□□□□ -0.33
CDC42BPB-203ENST00000558867 A0A0A6YYD4 124 aa12.95□□□□□ -0.34
CDC42BPB-203ENST00000558867 MGMTP16455 207 aa12.95□□□□□ -0.34
CDC42BPB-203ENST00000558867 RCVRNP35243 200 aa12.95□□□□□ -0.34
CDC42BPB-203ENST00000558867 PDZK1IP1Q13113 114 aa12.95□□□□□ -0.34
CDC42BPB-203ENST00000558867 PRDX4Q13162 271 aa12.95□□□□□ -0.34
CDC42BPB-203ENST00000558867 TMEM229BQ8NBD8 167 aa12.95□□□□□ -0.34
CDC42BPB-203ENST00000558867 C17orf50Q8WW18 174 aa12.95□□□□□ -0.34
CDC42BPB-203ENST00000558867 RNF170Q96K19 258 aa12.95□□□□□ -0.34
CDC42BPB-203ENST00000558867 Q96M66 194 aa12.95□□□□□ -0.34
CDC42BPB-203ENST00000558867 CITED2Q99967 270 aaPredicted RBP12.95□□□□□ -0.34
CDC42BPB-203ENST00000558867 NEURL2Q9BR09 285 aa12.95□□□□□ -0.34
CDC42BPB-203ENST00000558867 RHOFQ9HBH0 211 aa12.95□□□□□ -0.34
CDC42BPB-203ENST00000558867 HRASLSQ9HDD0 168 aa12.95□□□□□ -0.34
CDC42BPB-203ENST00000558867 ING4Q9UNL4 249 aa12.95□□□□□ -0.34
CDC42BPB-203ENST00000558867 FAM90A10PA6NDY2 464 aa12.94□□□□□ -0.34
CDC42BPB-203ENST00000558867 FAM90A18PA6NE21 464 aa12.94□□□□□ -0.34
CDC42BPB-203ENST00000558867 FAM90A16PA6NEW6 464 aa12.94□□□□□ -0.34
CDC42BPB-203ENST00000558867 FAM90A20PA6NIJ5 464 aa12.94□□□□□ -0.34
CDC42BPB-203ENST00000558867 FAM90A8PA6NJQ4 464 aa12.94□□□□□ -0.34
CDC42BPB-203ENST00000558867 FAM90A7PA6NKC0 464 aa12.94□□□□□ -0.34
CDC42BPB-203ENST00000558867 ZNF850A8MQ14 1090 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms