RNA–Protein interactions for RNA: ENST00000558439.5

AP4E1-202, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,165 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-202ENST00000558439 F8VVB4 439 aa13.29□□□□□ -0.28
AP4E1-202ENST00000558439 F8VWA3 439 aa13.29□□□□□ -0.28
AP4E1-202ENST00000558439 H7BYZ3 331 aa13.29□□□□□ -0.28
AP4E1-202ENST00000558439 IRF2P14316 349 aa13.29□□□□□ -0.28
AP4E1-202ENST00000558439 HNF1AP20823 631 aa13.29□□□□□ -0.28
AP4E1-202ENST00000558439 PMELP40967 661 aa13.29□□□□□ -0.28
AP4E1-202ENST00000558439 RAB4BP61018 213 aa13.29□□□□□ -0.28
AP4E1-202ENST00000558439 H3F3AP84243 136 aa13.29□□□□□ -0.28
AP4E1-202ENST00000558439 MSL2Q9HCI7 577 aa13.29□□□□□ -0.28
AP4E1-202ENST00000558439 B4E171 279 aa13.29□□□□□ -0.28
AP4E1-202ENST00000558439 MPZP25189 248 aa13.29□□□□□ -0.28
AP4E1-202ENST00000558439 TSPAN7P41732 249 aa13.29□□□□□ -0.28
AP4E1-202ENST00000558439 CEBPDP49716 269 aaPredicted RBP13.29□□□□□ -0.28
AP4E1-202ENST00000558439 SLC38A11Q08AI6 406 aa13.29□□□□□ -0.28
AP4E1-202ENST00000558439 CYB561D1Q8N8Q1 229 aa13.29□□□□□ -0.28
AP4E1-202ENST00000558439 LOC102723996A0A087X1L8 192 aa13.29□□□□□ -0.28
AP4E1-202ENST00000558439 CYTIPO60759 359 aa13.29□□□□□ -0.28
AP4E1-202ENST00000558439 S100A8P05109 93 aa13.29□□□□□ -0.28
AP4E1-202ENST00000558439 FGF7P21781 194 aa13.29□□□□□ -0.28
AP4E1-202ENST00000558439 GPR12P47775 334 aa13.29□□□□□ -0.28
AP4E1-202ENST00000558439 HOXA1P49639 335 aaPredicted RBP13.29□□□□□ -0.28
AP4E1-202ENST00000558439 SOX8P57073 446 aa13.29□□□□□ -0.28
AP4E1-202ENST00000558439 C1orf147Q96MC9 270 aaPredicted RBP13.29□□□□□ -0.28
AP4E1-202ENST00000558439 SSX3Q99909 188 aa13.29□□□□□ -0.28
AP4E1-202ENST00000558439 PLEKHA3Q9HB20 300 aa13.29□□□□□ -0.28
AP4E1-202ENST00000558439 SEMA5BQ9P283 1151 aa13.29□□□□□ -0.28
AP4E1-202ENST00000558439 PINLYPA6NC86 204 aa13.28□□□□□ -0.28
AP4E1-202ENST00000558439 CTSSP25774 331 aa13.28□□□□□ -0.28
AP4E1-202ENST00000558439 CD200P41217 278 aa13.28□□□□□ -0.28
AP4E1-202ENST00000558439 DLK1P80370 383 aa13.28□□□□□ -0.28
AP4E1-202ENST00000558439 IL24Q13007 206 aa13.28□□□□□ -0.28
AP4E1-202ENST00000558439 Q3ZCU0 254 aa13.28□□□□□ -0.28
AP4E1-202ENST00000558439 ZNF826PQ6ZT77 177 aa13.28□□□□□ -0.28
AP4E1-202ENST00000558439 LINC00518Q8N0U6 118 aa13.28□□□□□ -0.28
AP4E1-202ENST00000558439 SLC25A40Q8TBP6 338 aa13.28□□□□□ -0.28
AP4E1-202ENST00000558439 SPTAN1Q13813 2472 aaKnown RBP13.28□□□□□ -0.28
AP4E1-202ENST00000558439 A0A1W2PPQ1 181 aa13.28□□□□□ -0.28
AP4E1-202ENST00000558439 MAP1LC3B2A6NCE7 125 aa13.28□□□□□ -0.28
AP4E1-202ENST00000558439 FGF16O43320 207 aa13.28□□□□□ -0.28
AP4E1-202ENST00000558439 CYC1P08574 325 aa13.28□□□□□ -0.28
AP4E1-202ENST00000558439 HLA-DRB3P79483 266 aa13.28□□□□□ -0.28
AP4E1-202ENST00000558439 DEFB109BQ30KR1 87 aa13.28□□□□□ -0.28
AP4E1-202ENST00000558439 OR2Z1Q8NG97 314 aa13.28□□□□□ -0.28
AP4E1-202ENST00000558439 ATP5SQ99766 215 aa13.28□□□□□ -0.28
AP4E1-202ENST00000558439 MAP1LC3BQ9GZQ8 125 aa13.28□□□□□ -0.28
AP4E1-202ENST00000558439 OPA3Q9H6K4 179 aa13.28□□□□□ -0.28
AP4E1-202ENST00000558439 OR1A1Q9P1Q5 309 aa13.28□□□□□ -0.28
AP4E1-202ENST00000558439 TMEM30CPA0ZSE6 113 aa13.28□□□□□ -0.28
AP4E1-202ENST00000558439 BTBD17A6NE02 478 aa13.28□□□□□ -0.28
AP4E1-202ENST00000558439 H0YL77 283 aa13.28□□□□□ -0.28
AP4E1-202ENST00000558439 CA11O75493 328 aa13.28□□□□□ -0.28
AP4E1-202ENST00000558439 DANCRP0C864 163 aa13.28□□□□□ -0.28
AP4E1-202ENST00000558439 MDKP21741 143 aaPredicted RBP13.28□□□□□ -0.28
AP4E1-202ENST00000558439 SNCAP37840 140 aa13.28□□□□□ -0.28
AP4E1-202ENST00000558439 SPEM2Q0P670 501 aa13.28□□□□□ -0.28
AP4E1-202ENST00000558439 FOXO1Q12778 655 aa13.28□□□□□ -0.28
AP4E1-202ENST00000558439 ABHD14AQ9BUJ0 271 aa13.28□□□□□ -0.28
AP4E1-202ENST00000558439 RFNGQ9Y644 331 aa13.28□□□□□ -0.28
AP4E1-202ENST00000558439 ATP23Q9Y6H3 246 aa13.28□□□□□ -0.28
AP4E1-202ENST00000558439 SPTBN1Q01082 2364 aaKnown RBP13.28□□□□□ -0.28
AP4E1-202ENST00000558439 PGLYRP1O75594 196 aaPredicted RBP13.28□□□□□ -0.28
AP4E1-202ENST00000558439 SP1P08047 785 aa13.28□□□□□ -0.28
AP4E1-202ENST00000558439 AESQ08117 197 aa13.28□□□□□ -0.28
AP4E1-202ENST00000558439 ZNF718Q3SXZ3 478 aa13.28□□□□□ -0.28
AP4E1-202ENST00000558439 SELENOHQ8IZQ5 122 aaKnown RBP13.28□□□□□ -0.28
AP4E1-202ENST00000558439 Q9N2K0 584 aa13.28□□□□□ -0.28
AP4E1-202ENST00000558439 FOXJ2Q9P0K8 574 aa13.28□□□□□ -0.28
AP4E1-202ENST00000558439 FREM1Q5H8C1 2179 aa13.27□□□□□ -0.28
AP4E1-202ENST00000558439 TRAV20A0A0B4J274 112 aa13.27□□□□□ -0.28
AP4E1-202ENST00000558439 ZNF716A6NP11 495 aa13.27□□□□□ -0.28
AP4E1-202ENST00000558439 J3QT63 122 aa13.27□□□□□ -0.28
AP4E1-202ENST00000558439 RRP8O43159 456 aaKnown RBP13.27□□□□□ -0.28
AP4E1-202ENST00000558439 CFPP27918 469 aa13.27□□□□□ -0.28
AP4E1-202ENST00000558439 HGFACQ04756 655 aa13.27□□□□□ -0.28
AP4E1-202ENST00000558439 RAB31Q13636 194 aa13.27□□□□□ -0.28
AP4E1-202ENST00000558439 FBXW9Q5XUX1 488 aa13.27□□□□□ -0.28
AP4E1-202ENST00000558439 ZNF385CQ66K41 422 aaPredicted RBP13.27□□□□□ -0.28
AP4E1-202ENST00000558439 IFT22Q9H7X7 185 aa13.27□□□□□ -0.28
AP4E1-202ENST00000558439 TMEM9BQ9NQ34 198 aa13.27□□□□□ -0.28
AP4E1-202ENST00000558439 FOXD3Q9UJU5 478 aaPredicted RBP13.27□□□□□ -0.28
AP4E1-202ENST00000558439 RHBDL1O75783 438 aa13.27□□□□□ -0.29
AP4E1-202ENST00000558439 SMIM8Q96KF7 97 aa13.27□□□□□ -0.29
AP4E1-202ENST00000558439 DLL3Q9NYJ7 618 aa13.27□□□□□ -0.29
AP4E1-202ENST00000558439 MTCH1Q9NZJ7 389 aa13.27□□□□□ -0.29
AP4E1-202ENST00000558439 LAMP3Q9UQV4 416 aa13.27□□□□□ -0.29
AP4E1-202ENST00000558439 IGSF23A1L1A6 192 aa13.27□□□□□ -0.29
AP4E1-202ENST00000558439 DBX1A6NMT0 343 aa13.27□□□□□ -0.29
AP4E1-202ENST00000558439 C17orf112F2Z3M2 114 aa13.27□□□□□ -0.29
AP4E1-202ENST00000558439 G6PCP35575 357 aa13.27□□□□□ -0.29
AP4E1-202ENST00000558439 HPSE2Q8WWQ2 592 aa13.27□□□□□ -0.29
AP4E1-202ENST00000558439 GPR146Q96CH1 333 aa13.27□□□□□ -0.29
AP4E1-202ENST00000558439 HIPK2Q9H2X6 1198 aa13.27□□□□□ -0.29
AP4E1-202ENST00000558439 DHRS7BQ6IAN0 325 aaPredicted RBP13.26□□□□□ -0.29
AP4E1-202ENST00000558439 OR10D4PQ8NGN7 298 aa13.26□□□□□ -0.29
AP4E1-202ENST00000558439 OR8U8P0C7N1 319 aa13.26□□□□□ -0.29
AP4E1-202ENST00000558439 NCR3LG1Q68D85 454 aa13.26□□□□□ -0.29
AP4E1-202ENST00000558439 GALNT14Q96FL9 552 aa13.26□□□□□ -0.29
AP4E1-202ENST00000558439 CARHSP1Q9Y2V2 147 aaKnown RBP13.26□□□□□ -0.29
AP4E1-202ENST00000558439 IGKV1D-13A0A0B4J2D9 117 aa13.26□□□□□ -0.29
AP4E1-202ENST00000558439 PPP5D1E7EU14 171 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms