RNA–Protein interactions for RNA: ENST00000558093.1

SPG11-206, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 526 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-206ENST00000558093 RBP2P50120 134 aa1.88□□□□□ -2.11
SPG11-206ENST00000558093 GPM6AP51674 278 aa1.88□□□□□ -2.11
SPG11-206ENST00000558093 SUB1P53999 127 aaKnown RBP eCLIP1.88□□□□□ -2.11
SPG11-206ENST00000558093 CRISP3P54108 245 aa1.88□□□□□ -2.11
SPG11-206ENST00000558093 RAB38P57729 211 aa1.88□□□□□ -2.11
SPG11-206ENST00000558093 RHOBP62745 196 aa1.88□□□□□ -2.11
SPG11-206ENST00000558093 DYNLL1P63167 89 aaKnown RBP1.88□□□□□ -2.11
SPG11-206ENST00000558093 RUNX1Q01196 453 aa1.88□□□□□ -2.11
SPG11-206ENST00000558093 RELAQ04206 551 aa1.88□□□□□ -2.11
SPG11-206ENST00000558093 CLINT1Q14677 625 aa1.88□□□□□ -2.11
SPG11-206ENST00000558093 KIAA0087Q14695 138 aa1.88□□□□□ -2.11
SPG11-206ENST00000558093 CDK10Q15131 360 aa1.88□□□□□ -2.11
SPG11-206ENST00000558093 RSU1Q15404 277 aa1.88□□□□□ -2.11
SPG11-206ENST00000558093 ZNF726P1Q15940 193 aa1.88□□□□□ -2.11
SPG11-206ENST00000558093 HIST3H3Q16695 136 aa1.88□□□□□ -2.11
SPG11-206ENST00000558093 TRMT12Q53H54 448 aaKnown RBP1.88□□□□□ -2.11
SPG11-206ENST00000558093 TMEM128Q5BJH2 165 aa1.88□□□□□ -2.11
SPG11-206ENST00000558093 TPTE2P1Q5T6R2 138 aa1.88□□□□□ -2.11
SPG11-206ENST00000558093 N4BP2L1Q5TBK1 243 aaPredicted RBP1.88□□□□□ -2.11
SPG11-206ENST00000558093 UBE2UQ5VVX9 321 aa1.88□□□□□ -2.11
SPG11-206ENST00000558093 OR10K2Q6IF99 312 aa1.88□□□□□ -2.11
SPG11-206ENST00000558093 RWDD4Q6NW29 188 aaKnown RBP1.88□□□□□ -2.11
SPG11-206ENST00000558093 SFXN4Q6P4A7 337 aa1.88□□□□□ -2.11
SPG11-206ENST00000558093 TMPPEQ6ZT21 453 aa1.88□□□□□ -2.11
SPG11-206ENST00000558093 DOLPP1Q86YN1 238 aa1.88□□□□□ -2.11
SPG11-206ENST00000558093 PIANPQ8IYJ0 282 aa1.88□□□□□ -2.11
SPG11-206ENST00000558093 SPICQ8N5J4 248 aa1.88□□□□□ -2.11
SPG11-206ENST00000558093 TMEM86BQ8N661 226 aa1.88□□□□□ -2.11
SPG11-206ENST00000558093 ZFP41Q8N8Y5 198 aa1.88□□□□□ -2.11
SPG11-206ENST00000558093 OR1L8Q8NGR8 309 aa1.88□□□□□ -2.11
SPG11-206ENST00000558093 OR4X1Q8NH49 305 aa1.88□□□□□ -2.11
SPG11-206ENST00000558093 OR51E1Q8TCB6 317 aa1.88□□□□□ -2.11
SPG11-206ENST00000558093 GNPDA2Q8TDQ7 276 aa1.88□□□□□ -2.11
SPG11-206ENST00000558093 SLC37A2Q8TED4 501 aa1.88□□□□□ -2.11
SPG11-206ENST00000558093 ASB13Q8WXK3 278 aa1.88□□□□□ -2.11
SPG11-206ENST00000558093 GHSRQ92847 366 aa1.88□□□□□ -2.11
SPG11-206ENST00000558093 TMEM203Q969S6 136 aa1.88□□□□□ -2.11
SPG11-206ENST00000558093 CLDN23Q96B33 292 aa1.88□□□□□ -2.11
SPG11-206ENST00000558093 LRRC58Q96CX6 371 aa1.88□□□□□ -2.11
SPG11-206ENST00000558093 RCN3Q96D15 328 aa1.88□□□□□ -2.11
SPG11-206ENST00000558093 LINC00477Q96M19 166 aa1.88□□□□□ -2.11
SPG11-206ENST00000558093 RARRES2Q99969 163 aa1.88□□□□□ -2.11
SPG11-206ENST00000558093 MRPL45Q9BRJ2 306 aaKnown RBP1.88□□□□□ -2.11
SPG11-206ENST00000558093 MARVELD1Q9BSK0 173 aa1.88□□□□□ -2.11
SPG11-206ENST00000558093 FBXL15Q9H469 300 aa1.88□□□□□ -2.11
SPG11-206ENST00000558093 PRORYQ9H606 182 aa1.88□□□□□ -2.11
SPG11-206ENST00000558093 RNF167Q9H6Y7 350 aa1.88□□□□□ -2.11
SPG11-206ENST00000558093 LRTM1Q9HBL6 345 aa1.88□□□□□ -2.11
SPG11-206ENST00000558093 HMG20AQ9NP66 347 aa1.88□□□□□ -2.11
SPG11-206ENST00000558093 KCNIP1Q9NZI2 227 aa1.88□□□□□ -2.11
SPG11-206ENST00000558093 OR12D3Q9UGF7 316 aa1.88□□□□□ -2.11
SPG11-206ENST00000558093 PCYOX1Q9UHG3 505 aa1.88□□□□□ -2.11
SPG11-206ENST00000558093 JPT1Q9UK76 154 aa1.88□□□□□ -2.11
SPG11-206ENST00000558093 SIGLEC9Q9Y336 463 aa1.88□□□□□ -2.11
SPG11-206ENST00000558093 OR51B2Q9Y5P1 312 aa1.88□□□□□ -2.11
SPG11-206ENST00000558093 UBIAD1Q9Y5Z9 338 aa1.88□□□□□ -2.11
SPG11-206ENST00000558093 CD109Q6YHK3 1445 aa1.88□□□□□ -2.11
SPG11-206ENST00000558093 RIMS2Q9UQ26 1411 aa1.88□□□□□ -2.11
SPG11-206ENST00000558093 SCN10AQ9Y5Y9 1956 aa1.88□□□□□ -2.11
SPG11-206ENST00000558093 COL22A1Q8NFW1 1626 aaPredicted RBP1.88□□□□□ -2.11
SPG11-206ENST00000558093 PLXND1Q9Y4D7 1925 aa1.87□□□□□ -2.11
SPG11-206ENST00000558093 FOCADQ5VW36 1801 aa1.87□□□□□ -2.11
SPG11-206ENST00000558093 PHIPQ8WWQ0 1821 aa1.87□□□□□ -2.11
SPG11-206ENST00000558093 IGLV11-55A0A075B6I3 123 aa1.87□□□□□ -2.11
SPG11-206ENST00000558093 OR4C46A6NHA9 309 aa1.87□□□□□ -2.11
SPG11-206ENST00000558093 NCBP2LA6PVI3 153 aaKnown RBP1.87□□□□□ -2.11
SPG11-206ENST00000558093 TRAPPC2LH3BP13 241 aa1.87□□□□□ -2.11
SPG11-206ENST00000558093 TNFRSF11BO00300 401 aa1.87□□□□□ -2.11
SPG11-206ENST00000558093 SLC17A3O00476 420 aa1.87□□□□□ -2.11
SPG11-206ENST00000558093 ZNF593O00488 134 aaPredicted RBP1.87□□□□□ -2.11
SPG11-206ENST00000558093 HMGB3O15347 200 aaKnown RBP1.87□□□□□ -2.11
SPG11-206ENST00000558093 RGS5O15539 181 aa1.87□□□□□ -2.11
SPG11-206ENST00000558093 TCF21O43680 179 aa1.87□□□□□ -2.11
SPG11-206ENST00000558093 ORC5O43913 435 aa1.87□□□□□ -2.11
SPG11-206ENST00000558093 MFSD11O43934 449 aa1.87□□□□□ -2.11
SPG11-206ENST00000558093 UGT2B11O75310 529 aa1.87□□□□□ -2.11
SPG11-206ENST00000558093 SOX14O95416 240 aa1.87□□□□□ -2.11
SPG11-206ENST00000558093 IGLV3-19P01714 112 aa1.87□□□□□ -2.11
SPG11-206ENST00000558093 S100A8P05109 93 aa1.87□□□□□ -2.11
SPG11-206ENST00000558093 FGF1P05230 155 aa1.87□□□□□ -2.11
SPG11-206ENST00000558093 CSF3P09919 207 aa1.87□□□□□ -2.11
SPG11-206ENST00000558093 OR5AL1P0C617 328 aa1.87□□□□□ -2.11
SPG11-206ENST00000558093 ZNF286BP0CG31 522 aa1.87□□□□□ -2.11
SPG11-206ENST00000558093 CT45A6P0DMU7 189 aa1.87□□□□□ -2.11
SPG11-206ENST00000558093 CT45A5P0DMU8 189 aa1.87□□□□□ -2.11
SPG11-206ENST00000558093 CT45A7P0DMV0 189 aa1.87□□□□□ -2.11
SPG11-206ENST00000558093 CD99P14209 185 aa1.87□□□□□ -2.11
SPG11-206ENST00000558093 GABRA1P14867 456 aa1.87□□□□□ -2.11
SPG11-206ENST00000558093 FOLR1P15328 257 aa1.87□□□□□ -2.11
SPG11-206ENST00000558093 RAB5AP20339 215 aa1.87□□□□□ -2.11
SPG11-206ENST00000558093 USF1P22415 310 aaPredicted RBP1.87□□□□□ -2.11
SPG11-206ENST00000558093 PAX6P26367 422 aa1.87□□□□□ -2.11
SPG11-206ENST00000558093 AK4P27144 223 aaPredicted RBP1.87□□□□□ -2.11
SPG11-206ENST00000558093 GLRXP35754 106 aa1.87□□□□□ -2.11
SPG11-206ENST00000558093 CDKN2BP42772 138 aa1.87□□□□□ -2.11
SPG11-206ENST00000558093 EIF2B2P49770 351 aaKnown RBP1.87□□□□□ -2.11
SPG11-206ENST00000558093 FABP6P51161 128 aa1.87□□□□□ -2.11
SPG11-206ENST00000558093 TAS2R43P59537 309 aa1.87□□□□□ -2.11
SPG11-206ENST00000558093 RRAS2P62070 204 aaPredicted RBP1.87□□□□□ -2.11
SPG11-206ENST00000558093 HPCAP84074 193 aa1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms