RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 DUSP23Q9BVJ7 150 aa10.1□□□□□ -0.79
VIPAS39-211ENST00000557658 PRO1933Q9H354 126 aa10.1□□□□□ -0.79
VIPAS39-211ENST00000557658 CDH20Q9HBT6 801 aa10.1□□□□□ -0.79
VIPAS39-211ENST00000557658 WNT16Q9UBV4 365 aa10.1□□□□□ -0.79
VIPAS39-211ENST00000557658 CEBPZOSA8MTT3 80 aa10.1□□□□□ -0.79
VIPAS39-211ENST00000557658 IL2RGP31785 369 aa10.1□□□□□ -0.79
VIPAS39-211ENST00000557658 MDH2P40926 338 aaKnown RBP10.1□□□□□ -0.79
VIPAS39-211ENST00000557658 GPM6AP51674 278 aa10.1□□□□□ -0.79
VIPAS39-211ENST00000557658 SERF2P84101 59 aa10.1□□□□□ -0.79
VIPAS39-211ENST00000557658 COL19A1Q14993 1142 aa10.1□□□□□ -0.79
VIPAS39-211ENST00000557658 ZNF726P1Q15940 193 aa10.1□□□□□ -0.79
VIPAS39-211ENST00000557658 ABLIM2Q6H8Q1 611 aa10.1□□□□□ -0.79
VIPAS39-211ENST00000557658 MKXQ8IYA7 352 aa10.1□□□□□ -0.79
VIPAS39-211ENST00000557658 HS3ST6Q96QI5 342 aa10.1□□□□□ -0.79
VIPAS39-211ENST00000557658 VSIRQ9H7M9 311 aa10.1□□□□□ -0.79
VIPAS39-211ENST00000557658 MRPS17Q9Y2R5 130 aaKnown RBP10.1□□□□□ -0.79
VIPAS39-211ENST00000557658 OR2W1Q9Y3N9 320 aa10.1□□□□□ -0.79
VIPAS39-211ENST00000557658 SYNGR2O43760 224 aa10.09□□□□□ -0.79
VIPAS39-211ENST00000557658 UMODP07911 640 aa10.09□□□□□ -0.79
VIPAS39-211ENST00000557658 PSG2P11465 335 aa10.09□□□□□ -0.79
VIPAS39-211ENST00000557658 MLF1P58340 268 aa10.09□□□□□ -0.79
VIPAS39-211ENST00000557658 HBG1P69891 147 aa10.09□□□□□ -0.79
VIPAS39-211ENST00000557658 HBG2P69892 147 aa10.09□□□□□ -0.79
VIPAS39-211ENST00000557658 ZNF880Q6PDB4 577 aa10.09□□□□□ -0.79
VIPAS39-211ENST00000557658 PCSK4Q6UW60 755 aa10.09□□□□□ -0.79
VIPAS39-211ENST00000557658 COLCA1Q6ZS62 124 aa10.09□□□□□ -0.79
VIPAS39-211ENST00000557658 TMEM183AQ8IXX5 376 aa10.09□□□□□ -0.79
VIPAS39-211ENST00000557658 ZDHHC23Q8IYP9 409 aa10.09□□□□□ -0.79
VIPAS39-211ENST00000557658 ZNF525Q8N782 197 aa10.09□□□□□ -0.79
VIPAS39-211ENST00000557658 CPEB3Q8NE35 698 aaKnown RBP10.09□□□□□ -0.79
VIPAS39-211ENST00000557658 OR10J5Q8NHC4 309 aa10.09□□□□□ -0.79
VIPAS39-211ENST00000557658 CLDN23Q96B33 292 aa10.09□□□□□ -0.79
VIPAS39-211ENST00000557658 MEGF10Q96KG7 1140 aa10.09□□□□□ -0.79
VIPAS39-211ENST00000557658 PSENENQ9NZ42 101 aa10.09□□□□□ -0.79
VIPAS39-211ENST00000557658 MTCH1Q9NZJ7 389 aa10.09□□□□□ -0.79
VIPAS39-211ENST00000557658 IL36RNQ9UBH0 155 aa10.09□□□□□ -0.79
VIPAS39-211ENST00000557658 OR14J1Q9UGF5 321 aa10.09□□□□□ -0.79
VIPAS39-211ENST00000557658 TNRC6BQ9UPQ9 1833 aaKnown RBP10.09□□□□□ -0.79
VIPAS39-211ENST00000557658 A0A1B0GV90 55 aa10.09□□□□□ -0.79
VIPAS39-211ENST00000557658 CD300LBA8K4G0 201 aa10.09□□□□□ -0.79
VIPAS39-211ENST00000557658 FGF5P12034 268 aa10.09□□□□□ -0.79
VIPAS39-211ENST00000557658 CEACAM21Q3KPI0 293 aa10.09□□□□□ -0.79
VIPAS39-211ENST00000557658 TMEM41BQ5BJD5 291 aa10.09□□□□□ -0.79
VIPAS39-211ENST00000557658 ZNF324BQ6AW86 544 aaPredicted RBP10.09□□□□□ -0.79
VIPAS39-211ENST00000557658 LILRB2Q8N423 598 aa10.09□□□□□ -0.79
VIPAS39-211ENST00000557658 LSM10Q969L4 123 aaKnown RBP10.09□□□□□ -0.79
VIPAS39-211ENST00000557658 PINX1Q96BK5 328 aaKnown RBP10.09□□□□□ -0.79
VIPAS39-211ENST00000557658 SSX3Q99909 188 aa10.09□□□□□ -0.79
VIPAS39-211ENST00000557658 REPIN1Q9BWE0 567 aaKnown RBP10.09□□□□□ -0.79
VIPAS39-211ENST00000557658 GPR87Q9BY21 358 aa10.09□□□□□ -0.79
VIPAS39-211ENST00000557658 SRD5A3Q9H8P0 318 aa10.09□□□□□ -0.79
VIPAS39-211ENST00000557658 CACNG5Q9UF02 275 aa10.09□□□□□ -0.79
VIPAS39-211ENST00000557658 NAT8Q9UHE5 227 aa10.09□□□□□ -0.79
VIPAS39-211ENST00000557658 CACNA1EQ15878 2313 aa10.08□□□□□ -0.8
VIPAS39-211ENST00000557658 LY6G6EA0A0G2JKS1 128 aa10.08□□□□□ -0.8
VIPAS39-211ENST00000557658 LRP5LA4QPB2 252 aa10.08□□□□□ -0.8
VIPAS39-211ENST00000557658 MAP1LC3B2A6NCE7 125 aa10.08□□□□□ -0.8
VIPAS39-211ENST00000557658 C9J4A7 227 aa10.08□□□□□ -0.8
VIPAS39-211ENST00000557658 DVL1O14640 695 aa10.08□□□□□ -0.8
VIPAS39-211ENST00000557658 METTL15P1P0C7V9 234 aa10.08□□□□□ -0.8
VIPAS39-211ENST00000557658 IAPPP10997 89 aa10.08□□□□□ -0.8
VIPAS39-211ENST00000557658 EPHA8P29322 1005 aaPredicted RBP10.08□□□□□ -0.8
VIPAS39-211ENST00000557658 CLN3Q13286 438 aa10.08□□□□□ -0.8
VIPAS39-211ENST00000557658 LRRC75BQ2VPJ9 315 aa10.08□□□□□ -0.8
VIPAS39-211ENST00000557658 SSX7Q7RTT5 188 aa10.08□□□□□ -0.8
VIPAS39-211ENST00000557658 OR4X1Q8NH49 305 aa10.08□□□□□ -0.8
VIPAS39-211ENST00000557658 OR10D3Q8NH80 312 aa10.08□□□□□ -0.8
VIPAS39-211ENST00000557658 MRPL30Q8TCC3 161 aaKnown RBP10.08□□□□□ -0.8
VIPAS39-211ENST00000557658 SGCZQ96LD1 299 aa10.08□□□□□ -0.8
VIPAS39-211ENST00000557658 MAP1LC3BQ9GZQ8 125 aa10.08□□□□□ -0.8
VIPAS39-211ENST00000557658 FGF23Q9GZV9 251 aaPredicted RBP10.08□□□□□ -0.8
VIPAS39-211ENST00000557658 U3KQA8 63 aa10.08□□□□□ -0.8
VIPAS39-211ENST00000557658 CHD3Q12873 2000 aaKnown RBP10.08□□□□□ -0.8
VIPAS39-211ENST00000557658 MYO15AQ9UKN7 3530 aa10.08□□□□□ -0.8
VIPAS39-211ENST00000557658 TRBV6-6A0A0A6YYG2 114 aa10.08□□□□□ -0.8
VIPAS39-211ENST00000557658 P04436 131 aa10.08□□□□□ -0.8
VIPAS39-211ENST00000557658 WNT2P09544 360 aa10.08□□□□□ -0.8
VIPAS39-211ENST00000557658 CCNOP22674 350 aa10.08□□□□□ -0.8
VIPAS39-211ENST00000557658 ADIRFQ15847 76 aa10.08□□□□□ -0.8
VIPAS39-211ENST00000557658 IZUMO4Q1ZYL8 232 aa10.08□□□□□ -0.8
VIPAS39-211ENST00000557658 WDR25Q64LD2 544 aaPredicted RBP10.08□□□□□ -0.8
VIPAS39-211ENST00000557658 NCR3LG1Q68D85 454 aa10.08□□□□□ -0.8
VIPAS39-211ENST00000557658 FAM180AQ6UWF9 173 aa10.08□□□□□ -0.8
VIPAS39-211ENST00000557658 DBX2Q6ZNG2 339 aa10.08□□□□□ -0.8
VIPAS39-211ENST00000557658 Q6ZRM9 215 aa10.08□□□□□ -0.8
VIPAS39-211ENST00000557658 MRPL21Q7Z2W9 205 aaKnown RBP10.08□□□□□ -0.8
VIPAS39-211ENST00000557658 LINC00596Q86U02 117 aa10.08□□□□□ -0.8
VIPAS39-211ENST00000557658 C17orf78Q8N4C9 275 aa10.08□□□□□ -0.8
VIPAS39-211ENST00000557658 PSMF1Q92530 271 aa10.08□□□□□ -0.8
VIPAS39-211ENST00000557658 SMIM7Q9BQ49 75 aa10.08□□□□□ -0.8
VIPAS39-211ENST00000557658 PLK3Q9H4B4 646 aa10.08□□□□□ -0.8
VIPAS39-211ENST00000557658 ERRFI1Q9UJM3 462 aaPredicted RBP10.08□□□□□ -0.8
VIPAS39-211ENST00000557658 SLC31A2O15432 143 aa10.07□□□□□ -0.8
VIPAS39-211ENST00000557658 ZNF737O75373 536 aa10.07□□□□□ -0.8
VIPAS39-211ENST00000557658 MDKP21741 143 aaPredicted RBP10.07□□□□□ -0.8
VIPAS39-211ENST00000557658 FGF7P21781 194 aa10.07□□□□□ -0.8
VIPAS39-211ENST00000557658 ARL16Q0P5N6 197 aa10.07□□□□□ -0.8
VIPAS39-211ENST00000557658 PMS2P11Q13670 270 aa10.07□□□□□ -0.8
VIPAS39-211ENST00000557658 IL11RAQ14626 422 aa10.07□□□□□ -0.8
VIPAS39-211ENST00000557658 JOSD1Q15040 202 aaPredicted RBP10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms