RNA–Protein interactions for RNA: ENST00000557285.1

VSX1-207, Transcript of visual system homeobox 1, humanhuman

TSL 3

Gene VSX1, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-207ENST00000557285 NOTCH1P46531 2555 aa13.2□□□□□ -0.3
VSX1-207ENST00000557285 IGHV3-72A0A0B4J1Y9 119 aa13.2□□□□□ -0.3
VSX1-207ENST00000557285 CCRL2O00421 344 aa13.2□□□□□ -0.3
VSX1-207ENST00000557285 SPINT2O43291 252 aa13.2□□□□□ -0.3
VSX1-207ENST00000557285 TMEM11P17152 192 aa13.2□□□□□ -0.3
VSX1-207ENST00000557285 SRMP19623 302 aa13.2□□□□□ -0.3
VSX1-207ENST00000557285 FUT3P21217 361 aa13.2□□□□□ -0.3
VSX1-207ENST00000557285 RAB7AP51149 207 aa13.2□□□□□ -0.3
VSX1-207ENST00000557285 SIGIRRQ6IA17 410 aa13.2□□□□□ -0.3
VSX1-207ENST00000557285 C5orf24Q7Z6I8 188 aa13.2□□□□□ -0.3
VSX1-207ENST00000557285 CENPVQ7Z7K6 275 aaPredicted RBP13.2□□□□□ -0.3
VSX1-207ENST00000557285 OCSTAMPQ9BR26 566 aa13.2□□□□□ -0.3
VSX1-207ENST00000557285 DUSP21Q9H596 190 aa13.2□□□□□ -0.3
VSX1-207ENST00000557285 GFOD1Q9NXC2 390 aa13.2□□□□□ -0.3
VSX1-207ENST00000557285 MOB4Q9Y3A3 225 aa13.2□□□□□ -0.3
VSX1-207ENST00000557285 SLC31A2O15432 143 aa13.19□□□□□ -0.3
VSX1-207ENST00000557285 ORC5O43913 435 aa13.19□□□□□ -0.3
VSX1-207ENST00000557285 PDCD6O75340 191 aa13.19□□□□□ -0.3
VSX1-207ENST00000557285 IGKV1D-33P01593 117 aa13.19□□□□□ -0.3
VSX1-207ENST00000557285 IGKV1-33P01594 117 aa13.19□□□□□ -0.3
VSX1-207ENST00000557285 HBZP02008 142 aa13.19□□□□□ -0.3
VSX1-207ENST00000557285 AMY1AP04745 511 aa13.19□□□□□ -0.3
VSX1-207ENST00000557285 AMY2AP04746 511 aa13.19□□□□□ -0.3
VSX1-207ENST00000557285 RCC1P18754 421 aaPredicted RBP13.19□□□□□ -0.3
VSX1-207ENST00000557285 CRHBPP24387 322 aa13.19□□□□□ -0.3
VSX1-207ENST00000557285 HSPA13P48723 471 aa13.19□□□□□ -0.3
VSX1-207ENST00000557285 P2RY14Q15391 338 aa13.19□□□□□ -0.3
VSX1-207ENST00000557285 C6orf183Q5T699 404 aa13.19□□□□□ -0.3
VSX1-207ENST00000557285 SLC16A12Q6ZSM3 486 aa13.19□□□□□ -0.3
VSX1-207ENST00000557285 OR5AU1Q8NGC0 362 aa13.19□□□□□ -0.3
VSX1-207ENST00000557285 PHYHIPQ92561 330 aa13.19□□□□□ -0.3
VSX1-207ENST00000557285 WNT10AQ9GZT5 417 aa13.19□□□□□ -0.3
VSX1-207ENST00000557285 GHRLQ9UBU3 117 aa13.19□□□□□ -0.3
VSX1-207ENST00000557285 FAM90A10PA6NDY2 464 aa13.18□□□□□ -0.3
VSX1-207ENST00000557285 FAM90A18PA6NE21 464 aa13.18□□□□□ -0.3
VSX1-207ENST00000557285 FAM90A16PA6NEW6 464 aa13.18□□□□□ -0.3
VSX1-207ENST00000557285 FAM90A20PA6NIJ5 464 aa13.18□□□□□ -0.3
VSX1-207ENST00000557285 FAM90A7PA6NKC0 464 aa13.18□□□□□ -0.3
VSX1-207ENST00000557285 FAM90A12PA8MX19 464 aa13.18□□□□□ -0.3
VSX1-207ENST00000557285 FAM90A5PA8MXJ8 464 aa13.18□□□□□ -0.3
VSX1-207ENST00000557285 FAM90A23PA8MXZ1 464 aa13.18□□□□□ -0.3
VSX1-207ENST00000557285 UCHL1P09936 223 aa13.18□□□□□ -0.3
VSX1-207ENST00000557285 FAM90A15PP0C7V4 464 aa13.18□□□□□ -0.3
VSX1-207ENST00000557285 FAM90A13PP0C7W8 464 aa13.18□□□□□ -0.3
VSX1-207ENST00000557285 FAM90A14PP0C7W9 464 aa13.18□□□□□ -0.3
VSX1-207ENST00000557285 FAM90A24PP0C7X0 464 aa13.18□□□□□ -0.3
VSX1-207ENST00000557285 UBBP0CG47 229 aa13.18□□□□□ -0.3
VSX1-207ENST00000557285 VSIG8P0DPA2 414 aa13.18□□□□□ -0.3
VSX1-207ENST00000557285 HTR2CP28335 458 aa13.18□□□□□ -0.3
VSX1-207ENST00000557285 LOXL3P58215 753 aa13.18□□□□□ -0.3
VSX1-207ENST00000557285 KHDC1LQ5JSQ8 128 aa13.18□□□□□ -0.3
VSX1-207ENST00000557285 OR8H3Q8N146 312 aa13.18□□□□□ -0.3
VSX1-207ENST00000557285 R3HDM4Q96D70 268 aa13.18□□□□□ -0.3
VSX1-207ENST00000557285 RBMXL1Q96E39 390 aaKnown RBP13.18□□□□□ -0.3
VSX1-207ENST00000557285 NEDD4LQ96PU5 975 aa13.18□□□□□ -0.3
VSX1-207ENST00000557285 NICN1Q9BSH3 213 aa13.18□□□□□ -0.3
VSX1-207ENST00000557285 TMEM59Q9BXS4 323 aa13.18□□□□□ -0.3
VSX1-207ENST00000557285 PLGRKTQ9HBL7 147 aa13.18□□□□□ -0.3
VSX1-207ENST00000557285 KCNIP1Q9NZI2 227 aa13.18□□□□□ -0.3
VSX1-207ENST00000557285 IGHV1-3A0A0C4DH29 117 aa13.17□□□□□ -0.3
VSX1-207ENST00000557285 GAPDHP04406 335 aaKnown RBP13.17□□□□□ -0.3
VSX1-207ENST00000557285 MLLT11Q13015 90 aaPredicted RBP13.17□□□□□ -0.3
VSX1-207ENST00000557285 GNMTQ14749 295 aa13.17□□□□□ -0.3
VSX1-207ENST00000557285 C1orf100Q5SVJ3 147 aa13.17□□□□□ -0.3
VSX1-207ENST00000557285 C10orf99Q6UWK7 81 aa13.17□□□□□ -0.3
VSX1-207ENST00000557285 TMEM91Q6ZNR0 172 aa13.17□□□□□ -0.3
VSX1-207ENST00000557285 PRSS48Q7RTY5 328 aa13.17□□□□□ -0.3
VSX1-207ENST00000557285 C6orf201Q7Z4U5 140 aa13.17□□□□□ -0.3
VSX1-207ENST00000557285 NDUFA11Q86Y39 141 aa13.17□□□□□ -0.3
VSX1-207ENST00000557285 OR52M1Q8NGK5 317 aa13.17□□□□□ -0.3
VSX1-207ENST00000557285 WIPF2Q8TF74 440 aaPredicted RBP13.17□□□□□ -0.3
VSX1-207ENST00000557285 SULT4A1Q9BR01 284 aa13.17□□□□□ -0.3
VSX1-207ENST00000557285 FAAP24Q9BTP7 215 aa13.17□□□□□ -0.3
VSX1-207ENST00000557285 TAF9BQ9HBM6 251 aa13.17□□□□□ -0.3
VSX1-207ENST00000557285 AK6Q9Y3D8 172 aaKnown RBP13.17□□□□□ -0.3
VSX1-207ENST00000557285 FAM90A9PA6NNJ1 464 aa13.16□□□□□ -0.3
VSX1-207ENST00000557285 M0QZK8 103 aa13.16□□□□□ -0.3
VSX1-207ENST00000557285 SC5DO75845 299 aa13.16□□□□□ -0.3
VSX1-207ENST00000557285 ATP6V1G2O95670 118 aa13.16□□□□□ -0.3
VSX1-207ENST00000557285 OPN1MWP04001 364 aa13.16□□□□□ -0.3
VSX1-207ENST00000557285 OPN1MW2P0DN77 364 aa13.16□□□□□ -0.3
VSX1-207ENST00000557285 OPN1MW3P0DN78 364 aa13.16□□□□□ -0.3
VSX1-207ENST00000557285 CPEP16870 476 aa13.16□□□□□ -0.3
VSX1-207ENST00000557285 IL3RAP26951 378 aa13.16□□□□□ -0.3
VSX1-207ENST00000557285 CALRP27797 417 aaKnown RBP13.16□□□□□ -0.3
VSX1-207ENST00000557285 RPS27AP62979 156 aaKnown RBP13.16□□□□□ -0.3
VSX1-207ENST00000557285 FABP5Q01469 135 aa13.16□□□□□ -0.3
VSX1-207ENST00000557285 UNC119Q13432 240 aa13.16□□□□□ -0.3
VSX1-207ENST00000557285 TPBGQ13641 420 aa13.16□□□□□ -0.3
VSX1-207ENST00000557285 TRAT1Q6PIZ9 186 aa13.16□□□□□ -0.3
VSX1-207ENST00000557285 THNSL2Q86YJ6 484 aa13.16□□□□□ -0.3
VSX1-207ENST00000557285 OR52L2PQ8NGH6 319 aa13.16□□□□□ -0.3
VSX1-207ENST00000557285 OR6M1Q8NGM8 313 aa13.16□□□□□ -0.3
VSX1-207ENST00000557285 SETD6Q8TBK2 473 aa13.16□□□□□ -0.3
VSX1-207ENST00000557285 MRPL30Q8TCC3 161 aaKnown RBP13.16□□□□□ -0.3
VSX1-207ENST00000557285 MGLLQ99685 303 aa13.16□□□□□ -0.3
VSX1-207ENST00000557285 CHMP1AQ9HD42 196 aaPredicted RBP13.16□□□□□ -0.3
VSX1-207ENST00000557285 RAB9BQ9NP90 201 aa13.16□□□□□ -0.3
VSX1-207ENST00000557285 OR2S2Q9NQN1 319 aa13.16□□□□□ -0.3
VSX1-207ENST00000557285 PLXNB1O43157 2135 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms