RNA–Protein interactions for RNA: ENST00000557280.5

SEC23A-213, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 4 BASIC

Gene SEC23A, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-213ENST00000557280 CD34P28906 385 aa16.98■□□□□ 0.31
SEC23A-213ENST00000557280 HILS1P60008 231 aa16.98■□□□□ 0.31
SEC23A-213ENST00000557280 OR52W1Q6IF63 320 aa16.98■□□□□ 0.31
SEC23A-213ENST00000557280 SAMD12Q8N8I0 201 aa16.98■□□□□ 0.31
SEC23A-213ENST00000557280 OR4P4Q8NGL7 312 aa16.98■□□□□ 0.31
SEC23A-213ENST00000557280 ZNF418Q8TF45 676 aaPredicted RBP16.98■□□□□ 0.31
SEC23A-213ENST00000557280 CMSS1Q9BQ75 279 aaKnown RBP16.98■□□□□ 0.31
SEC23A-213ENST00000557280 PRDM13Q9H4Q3 707 aa16.98■□□□□ 0.31
SEC23A-213ENST00000557280 TRBV6-6A0A0A6YYG2 114 aa16.97■□□□□ 0.31
SEC23A-213ENST00000557280 F2RL2O00254 374 aa16.97■□□□□ 0.31
SEC23A-213ENST00000557280 SDCBPO00560 298 aaPredicted RBP16.97■□□□□ 0.31
SEC23A-213ENST00000557280 TMEM127O75204 238 aa16.97■□□□□ 0.31
SEC23A-213ENST00000557280 RORCP51449 518 aa16.97■□□□□ 0.31
SEC23A-213ENST00000557280 LOXL3P58215 753 aa16.97■□□□□ 0.31
SEC23A-213ENST00000557280 HMGN3Q15651 99 aa16.97■□□□□ 0.31
SEC23A-213ENST00000557280 FAM189A2Q15884 450 aa16.97■□□□□ 0.31
SEC23A-213ENST00000557280 ZDHHC22Q8N966 263 aa16.97■□□□□ 0.31
SEC23A-213ENST00000557280 DTX3Q8N9I9 347 aa16.97■□□□□ 0.31
SEC23A-213ENST00000557280 RBM38Q9H0Z9 239 aaKnown RBP16.97■□□□□ 0.31
SEC23A-213ENST00000557280 A0A1W2PPE3 182 aa16.96■□□□□ 0.31
SEC23A-213ENST00000557280 TMEM235A6NFC5 223 aa16.96■□□□□ 0.31
SEC23A-213ENST00000557280 DNAJC9-AS1A6NH13 148 aa16.96■□□□□ 0.31
SEC23A-213ENST00000557280 SPINT2O43291 252 aa16.96■□□□□ 0.31
SEC23A-213ENST00000557280 MELTFP08582 738 aa16.96■□□□□ 0.31
SEC23A-213ENST00000557280 GNG10P50151 68 aa16.96■□□□□ 0.31
SEC23A-213ENST00000557280 GNMTQ14749 295 aa16.96■□□□□ 0.31
SEC23A-213ENST00000557280 CDNFQ49AH0 187 aa16.96■□□□□ 0.31
SEC23A-213ENST00000557280 UBE2NLQ5JXB2 153 aa16.96■□□□□ 0.31
SEC23A-213ENST00000557280 IZUMO1Q8IYV9 350 aa16.96■□□□□ 0.31
SEC23A-213ENST00000557280 OR10A7Q8NGE5 316 aa16.96■□□□□ 0.31
SEC23A-213ENST00000557280 MAFIPQ8WZ33 124 aa16.96■□□□□ 0.31
SEC23A-213ENST00000557280 KCTD12Q96CX2 325 aaKnown RBP16.96■□□□□ 0.31
SEC23A-213ENST00000557280 BCL7BQ9BQE9 202 aa16.96■□□□□ 0.31
SEC23A-213ENST00000557280 Q9N2K0 584 aa16.96■□□□□ 0.31
SEC23A-213ENST00000557280 COMMD3Q9UBI1 195 aa16.96■□□□□ 0.31
SEC23A-213ENST00000557280 PSG11Q9UQ72 335 aa16.96■□□□□ 0.31
SEC23A-213ENST00000557280 SERPINE3A8MV23 424 aa16.95■□□□□ 0.3
SEC23A-213ENST00000557280 HOXA3O43365 443 aaPredicted RBP16.95■□□□□ 0.3
SEC23A-213ENST00000557280 IGLV1-47P01700 117 aa16.95■□□□□ 0.3
SEC23A-213ENST00000557280 EIF4EP06730 217 aaKnown RBP16.95■□□□□ 0.3
SEC23A-213ENST00000557280 FCGR3AP08637 254 aa16.95■□□□□ 0.3
SEC23A-213ENST00000557280 CD3GP09693 182 aa16.95■□□□□ 0.3
SEC23A-213ENST00000557280 BAMBIQ13145 260 aa16.95■□□□□ 0.3
SEC23A-213ENST00000557280 ZNF260Q3ZCT1 412 aa16.95■□□□□ 0.3
SEC23A-213ENST00000557280 TRAT1Q6PIZ9 186 aa16.95■□□□□ 0.3
SEC23A-213ENST00000557280 Q6YL49 198 aa16.95■□□□□ 0.3
SEC23A-213ENST00000557280 OR52L2PQ8NGH6 319 aa16.95■□□□□ 0.3
SEC23A-213ENST00000557280 OR10V1Q8NGI7 309 aa16.95■□□□□ 0.3
SEC23A-213ENST00000557280 DYNC2LI1Q8TCX1 351 aa16.95■□□□□ 0.3
SEC23A-213ENST00000557280 NUDCD2Q8WVJ2 157 aa16.95■□□□□ 0.3
SEC23A-213ENST00000557280 ZDHHC16Q969W1 377 aa16.95■□□□□ 0.3
SEC23A-213ENST00000557280 ABCG5Q9H222 651 aa16.95■□□□□ 0.3
SEC23A-213ENST00000557280 RIMS4Q9H426 269 aaPredicted RBP16.95■□□□□ 0.3
SEC23A-213ENST00000557280 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.95■□□□□ 0.3
SEC23A-213ENST00000557280 GFOD1Q9NXC2 390 aa16.95■□□□□ 0.3
SEC23A-213ENST00000557280 KCNIP1Q9NZI2 227 aa16.95■□□□□ 0.3
SEC23A-213ENST00000557280 ZNF230Q9UIE0 474 aaPredicted RBP16.95■□□□□ 0.3
SEC23A-213ENST00000557280 FAM96BQ9Y3D0 163 aa16.95■□□□□ 0.3
SEC23A-213ENST00000557280 TRAV18A0A075B6X5 111 aa16.94■□□□□ 0.3
SEC23A-213ENST00000557280 SLC31A2O15432 143 aa16.94■□□□□ 0.3
SEC23A-213ENST00000557280 NOL3O60936 208 aaKnown RBP16.94■□□□□ 0.3
SEC23A-213ENST00000557280 IGHV4-59P01825 116 aa16.94■□□□□ 0.3
SEC23A-213ENST00000557280 FBP1P09467 338 aa16.94■□□□□ 0.3
SEC23A-213ENST00000557280 PTHLHP12272 177 aa16.94■□□□□ 0.3
SEC23A-213ENST00000557280 LGALS4P56470 323 aa16.94■□□□□ 0.3
SEC23A-213ENST00000557280 HLA-DRB3P79483 266 aa16.94■□□□□ 0.3
SEC23A-213ENST00000557280 HLA-DRB5Q30154 266 aa16.94■□□□□ 0.3
SEC23A-213ENST00000557280 PLA1AQ53H76 456 aa16.94■□□□□ 0.3
SEC23A-213ENST00000557280 RBMS3Q6XE24 437 aaKnown RBP16.94■□□□□ 0.3
SEC23A-213ENST00000557280 MOB1BQ7L9L4 216 aa16.94■□□□□ 0.3
SEC23A-213ENST00000557280 LDLRAD3Q86YD5 345 aa16.94■□□□□ 0.3
SEC23A-213ENST00000557280 TNFRSF19Q9NS68 423 aa16.94■□□□□ 0.3
SEC23A-213ENST00000557280 TBL2Q9Y4P3 447 aaKnown RBP16.94■□□□□ 0.3
SEC23A-213ENST00000557280 SSX5O60225 188 aa16.93■□□□□ 0.3
SEC23A-213ENST00000557280 HPGDSO60760 199 aa16.93■□□□□ 0.3
SEC23A-213ENST00000557280 SCGNO76038 276 aa16.93■□□□□ 0.3
SEC23A-213ENST00000557280 ZNF182P17025 639 aaPredicted RBP16.93■□□□□ 0.3
SEC23A-213ENST00000557280 ARFRP1Q13795 201 aa16.93■□□□□ 0.3
SEC23A-213ENST00000557280 SLC9A3R2Q15599 337 aa16.93■□□□□ 0.3
SEC23A-213ENST00000557280 HACD4Q5VWC8 232 aa16.93■□□□□ 0.3
SEC23A-213ENST00000557280 ZNF554Q86TJ5 538 aa16.93■□□□□ 0.3
SEC23A-213ENST00000557280 BEND2Q8NDZ0 799 aa16.93■□□□□ 0.3
SEC23A-213ENST00000557280 OR52M1Q8NGK5 317 aa16.93■□□□□ 0.3
SEC23A-213ENST00000557280 OR9G1Q8NH87 305 aa16.93■□□□□ 0.3
SEC23A-213ENST00000557280 GNG12Q9UBI6 72 aa16.93■□□□□ 0.3
SEC23A-213ENST00000557280 IGKV1D-8A0A087WSZ0 117 aa16.92■□□□□ 0.3
SEC23A-213ENST00000557280 A0A0A6YYJ9 748 aa16.92■□□□□ 0.3
SEC23A-213ENST00000557280 J3QR06 171 aa16.92■□□□□ 0.3
SEC23A-213ENST00000557280 SCTP09683 121 aa16.92■□□□□ 0.3
SEC23A-213ENST00000557280 PPP1CCP36873 323 aaKnown RBP16.92■□□□□ 0.3
SEC23A-213ENST00000557280 UBA52P62987 128 aaKnown RBP16.92■□□□□ 0.3
SEC23A-213ENST00000557280 SSX2Q16385 188 aa16.92■□□□□ 0.3
SEC23A-213ENST00000557280 ZNF439Q8NDP4 499 aa16.92■□□□□ 0.3
SEC23A-213ENST00000557280 ZNF596Q8TC21 504 aa16.92■□□□□ 0.3
SEC23A-213ENST00000557280 IL1F10Q8WWZ1 152 aa16.92■□□□□ 0.3
SEC23A-213ENST00000557280 MMP28Q9H239 520 aa16.92■□□□□ 0.3
SEC23A-213ENST00000557280 OR2S2Q9NQN1 319 aa16.92■□□□□ 0.3
SEC23A-213ENST00000557280 HILPDAQ9Y5L2 63 aa16.92■□□□□ 0.3
SEC23A-213ENST00000557280 IGKV1-6A0A0C4DH72 117 aa16.91■□□□□ 0.3
SEC23A-213ENST00000557280 CCDC160A6NGH7 325 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms