RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 PXNP49023 591 aaPredicted RBP7.83□□□□□ -1.16
SYNE3-205ENST00000557275 VKORC1L1Q8N0U8 176 aa7.83□□□□□ -1.16
SYNE3-205ENST00000557275 TRMT61AQ96FX7 289 aaKnown RBP7.83□□□□□ -1.16
SYNE3-205ENST00000557275 C2orf83Q53S99 150 aa7.83□□□□□ -1.16
SYNE3-205ENST00000557275 GPRIN1Q7Z2K8 1008 aa7.83□□□□□ -1.16
SYNE3-205ENST00000557275 NPVFQ9HCQ7 196 aa7.83□□□□□ -1.16
SYNE3-205ENST00000557275 HSPB7Q9UBY9 170 aa7.83□□□□□ -1.16
SYNE3-205ENST00000557275 IFNL4K9M1U5 179 aa7.82□□□□□ -1.16
SYNE3-205ENST00000557275 FAM157BP0CG42 384 aa7.82□□□□□ -1.16
SYNE3-205ENST00000557275 PLNP26678 52 aa7.82□□□□□ -1.16
SYNE3-205ENST00000557275 SMAD2Q15796 467 aaKnown RBP7.82□□□□□ -1.16
SYNE3-205ENST00000557275 TMEM30BQ3MIR4 351 aa7.82□□□□□ -1.16
SYNE3-205ENST00000557275 CD300LDQ6UXZ3 194 aa7.82□□□□□ -1.16
SYNE3-205ENST00000557275 LRRC29Q8WV35 223 aa7.82□□□□□ -1.16
SYNE3-205ENST00000557275 MS4A6EQ96DS6 147 aa7.82□□□□□ -1.16
SYNE3-205ENST00000557275 MS4A6AQ9H2W1 248 aa7.82□□□□□ -1.16
SYNE3-205ENST00000557275 TRAV9-1A0A075B6T8 112 aa7.82□□□□□ -1.16
SYNE3-205ENST00000557275 TMEM272A0A1B0GTI8 110 aa7.82□□□□□ -1.16
SYNE3-205ENST00000557275 CDC14BO60729 498 aa7.82□□□□□ -1.16
SYNE3-205ENST00000557275 B4GALT1P15291 398 aa7.82□□□□□ -1.16
SYNE3-205ENST00000557275 PSMB5P28074 263 aa7.82□□□□□ -1.16
SYNE3-205ENST00000557275 UCP3P55916 312 aa7.82□□□□□ -1.16
SYNE3-205ENST00000557275 TSPAN32Q96QS1 320 aa7.82□□□□□ -1.16
SYNE3-205ENST00000557275 CLDN2P57739 230 aa7.82□□□□□ -1.16
SYNE3-205ENST00000557275 ZFAND6Q6FIF0 208 aa7.82□□□□□ -1.16
SYNE3-205ENST00000557275 DDB2Q92466 427 aa7.82□□□□□ -1.16
SYNE3-205ENST00000557275 PTP4A1Q93096 173 aa7.82□□□□□ -1.16
SYNE3-205ENST00000557275 PAXXQ9BUH6 204 aa7.82□□□□□ -1.16
SYNE3-205ENST00000557275 CXXC4Q9H2H0 198 aa7.82□□□□□ -1.16
SYNE3-205ENST00000557275 SUMO2P61956 95 aaKnown RBP7.82□□□□□ -1.16
SYNE3-205ENST00000557275 SRSF4Q08170 494 aaKnown RBP7.82□□□□□ -1.16
SYNE3-205ENST00000557275 OR4X1Q8NH49 305 aa7.82□□□□□ -1.16
SYNE3-205ENST00000557275 ARHGAP5-AS1Q96IT6 56 aa7.82□□□□□ -1.16
SYNE3-205ENST00000557275 YAE1D1Q9NRH1 226 aa7.82□□□□□ -1.16
SYNE3-205ENST00000557275 EPPINO95925 133 aa7.82□□□□□ -1.16
SYNE3-205ENST00000557275 ORAI1Q96D31 301 aa7.82□□□□□ -1.16
SYNE3-205ENST00000557275 RBPJLQ9UBG7 517 aa7.82□□□□□ -1.16
SYNE3-205ENST00000557275 A0A087WUJ7 227 aa7.82□□□□□ -1.16
SYNE3-205ENST00000557275 NKX2-8O15522 239 aa7.82□□□□□ -1.16
SYNE3-205ENST00000557275 PFN3P60673 137 aa7.82□□□□□ -1.16
SYNE3-205ENST00000557275 CCL14Q16627 93 aa7.82□□□□□ -1.16
SYNE3-205ENST00000557275 MRGPREQ86SM8 312 aa7.82□□□□□ -1.16
SYNE3-205ENST00000557275 INSM2Q96T92 566 aaPredicted RBP7.82□□□□□ -1.16
SYNE3-205ENST00000557275 G6PC2Q9NQR9 355 aa7.82□□□□□ -1.16
SYNE3-205ENST00000557275 PLEKHB1Q9UF11 243 aaPredicted RBP7.82□□□□□ -1.16
SYNE3-205ENST00000557275 ARHGAP32A7KAX9 2087 aa7.82□□□□□ -1.16
SYNE3-205ENST00000557275 HOXD9P28356 352 aaPredicted RBP7.82□□□□□ -1.16
SYNE3-205ENST00000557275 CA7P43166 264 aa7.82□□□□□ -1.16
SYNE3-205ENST00000557275 MAMSTRQ6ZN01 415 aa7.82□□□□□ -1.16
SYNE3-205ENST00000557275 OR10D3Q8NH80 312 aa7.82□□□□□ -1.16
SYNE3-205ENST00000557275 DERL1Q9BUN8 251 aa7.82□□□□□ -1.16
SYNE3-205ENST00000557275 OR10S1Q8NGN2 331 aa7.82□□□□□ -1.16
SYNE3-205ENST00000557275 ZNF414Q96IQ9 312 aa7.82□□□□□ -1.16
SYNE3-205ENST00000557275 B9D1Q9UPM9 204 aa7.82□□□□□ -1.16
SYNE3-205ENST00000557275 TRAV30A0A087WSZ9 112 aa7.82□□□□□ -1.16
SYNE3-205ENST00000557275 PDCD11Q14690 1871 aaKnown RBP7.82□□□□□ -1.16
SYNE3-205ENST00000557275 AVPR2P30518 371 aa7.82□□□□□ -1.16
SYNE3-205ENST00000557275 ALG14Q96F25 216 aa7.82□□□□□ -1.16
SYNE3-205ENST00000557275 TNXAQ16473 311 aa7.81□□□□□ -1.16
SYNE3-205ENST00000557275 ZNF385CQ66K41 422 aaPredicted RBP7.81□□□□□ -1.16
SYNE3-205ENST00000557275 TINAGL1Q9GZM7 467 aaPredicted RBP7.81□□□□□ -1.16
SYNE3-205ENST00000557275 SLIRPQ9GZT3 109 aaKnown RBP7.81□□□□□ -1.16
SYNE3-205ENST00000557275 DHHO43323 396 aa7.81□□□□□ -1.16
SYNE3-205ENST00000557275 NPPBP16860 134 aa7.81□□□□□ -1.16
SYNE3-205ENST00000557275 FGF8P55075 233 aaPredicted RBP7.81□□□□□ -1.16
SYNE3-205ENST00000557275 FAAP20Q6NZ36 180 aa7.81□□□□□ -1.16
SYNE3-205ENST00000557275 ICOSLGO75144 302 aa7.81□□□□□ -1.16
SYNE3-205ENST00000557275 HYPMO75409 117 aa7.81□□□□□ -1.16
SYNE3-205ENST00000557275 CAPZBP47756 277 aa7.81□□□□□ -1.16
SYNE3-205ENST00000557275 CSNK1EP49674 416 aaKnown RBP7.81□□□□□ -1.16
SYNE3-205ENST00000557275 FBXL6Q8N531 539 aa7.81□□□□□ -1.16
SYNE3-205ENST00000557275 VN1R2Q8NFZ6 395 aa7.81□□□□□ -1.16
SYNE3-205ENST00000557275 ZNF775Q96BV0 537 aaPredicted RBP7.81□□□□□ -1.16
SYNE3-205ENST00000557275 HIVEP3Q5T1R4 2406 aa7.81□□□□□ -1.16
SYNE3-205ENST00000557275 PPIHO43447 177 aaKnown RBP7.81□□□□□ -1.16
SYNE3-205ENST00000557275 ADAP1O75689 374 aa7.81□□□□□ -1.16
SYNE3-205ENST00000557275 ST3GAL2Q16842 350 aa7.81□□□□□ -1.16
SYNE3-205ENST00000557275 FGF13Q92913 245 aa7.81□□□□□ -1.16
SYNE3-205ENST00000557275 SIGMAR1Q99720 223 aa7.81□□□□□ -1.16
SYNE3-205ENST00000557275 A0A1B0GWB2 263 aa7.81□□□□□ -1.16
SYNE3-205ENST00000557275 CNTFRP26992 372 aa7.81□□□□□ -1.16
SYNE3-205ENST00000557275 RHBDD2Q6NTF9 364 aa7.81□□□□□ -1.16
SYNE3-205ENST00000557275 OR13H1Q8NG92 308 aa7.81□□□□□ -1.16
SYNE3-205ENST00000557275 EMC6Q9BV81 110 aa7.81□□□□□ -1.16
SYNE3-205ENST00000557275 SNED1Q8TER0 1413 aa7.81□□□□□ -1.16
SYNE3-205ENST00000557275 SNRPD3P62318 126 aaKnown RBP7.81□□□□□ -1.16
SYNE3-205ENST00000557275 RSRP1Q9BUV0 290 aa7.81□□□□□ -1.16
SYNE3-205ENST00000557275 ODAMA1E959 279 aa7.81□□□□□ -1.16
SYNE3-205ENST00000557275 FAM90A26D6RGX4 464 aa7.81□□□□□ -1.16
SYNE3-205ENST00000557275 SIGLEC5O15389 551 aa7.81□□□□□ -1.16
SYNE3-205ENST00000557275 TMPRSS3P57727 454 aa7.81□□□□□ -1.16
SYNE3-205ENST00000557275 Q6ZSR9 355 aa7.81□□□□□ -1.16
SYNE3-205ENST00000557275 C16orf82Q7Z2V1 217 aa7.81□□□□□ -1.16
SYNE3-205ENST00000557275 CA5BP1Q8WTZ4 195 aa7.81□□□□□ -1.16
SYNE3-205ENST00000557275 TRAV17A0A0B4J275 112 aa7.81□□□□□ -1.16
SYNE3-205ENST00000557275 LCN2P80188 198 aa7.81□□□□□ -1.16
SYNE3-205ENST00000557275 BADQ92934 168 aa7.81□□□□□ -1.16
SYNE3-205ENST00000557275 C16orf92Q96LL3 132 aa7.81□□□□□ -1.16
SYNE3-205ENST00000557275 CYSLTR1Q9Y271 337 aa7.81□□□□□ -1.16
SYNE3-205ENST00000557275 SSC5DA1L4H1 1573 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms