RNA–Protein interactions for RNA: ENST00000557030.5

ATXN3-246, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 807 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-246ENST00000557030 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.98□□□□□ -1.77
ATXN3-246ENST00000557030 A0A0A6YYD4 124 aa3.98□□□□□ -1.77
ATXN3-246ENST00000557030 PIGBOS1A0A0B4J2F0 54 aa3.98□□□□□ -1.77
ATXN3-246ENST00000557030 MED19A0JLT2 244 aaPredicted RBP3.98□□□□□ -1.77
ATXN3-246ENST00000557030 TLCD2A6NGC4 264 aa3.98□□□□□ -1.77
ATXN3-246ENST00000557030 CRYM-AS1A6NIL9 109 aa3.98□□□□□ -1.77
ATXN3-246ENST00000557030 ZNF729A6NN14 1252 aaPredicted RBP3.98□□□□□ -1.77
ATXN3-246ENST00000557030 UMAD1C9J7I0 102 aa3.98□□□□□ -1.77
ATXN3-246ENST00000557030 H3BMH7 237 aa3.98□□□□□ -1.77
ATXN3-246ENST00000557030 AGPAT2O15120 278 aa3.98□□□□□ -1.77
ATXN3-246ENST00000557030 GMFGO60234 142 aa3.98□□□□□ -1.77
ATXN3-246ENST00000557030 ZNF354AO60765 605 aaPredicted RBP3.98□□□□□ -1.77
ATXN3-246ENST00000557030 CRTAPO75718 401 aaPredicted RBP3.98□□□□□ -1.77
ATXN3-246ENST00000557030 MPZL1O95297 269 aa3.98□□□□□ -1.77
ATXN3-246ENST00000557030 IGHV2-70P01814 119 aa3.98□□□□□ -1.77
ATXN3-246ENST00000557030 PRH1P02810 166 aa3.98□□□□□ -1.77
ATXN3-246ENST00000557030 OR8U8P0C7N1 319 aa3.98□□□□□ -1.77
ATXN3-246ENST00000557030 OR8U9P0C7N5 309 aa3.98□□□□□ -1.77
ATXN3-246ENST00000557030 MMP9P14780 707 aa3.98□□□□□ -1.77
ATXN3-246ENST00000557030 RPS2P15880 293 aaKnown RBP3.98□□□□□ -1.77
ATXN3-246ENST00000557030 FKBP2P26885 142 aaKnown RBP3.98□□□□□ -1.77
ATXN3-246ENST00000557030 P2RY1P47900 373 aa3.98□□□□□ -1.77
ATXN3-246ENST00000557030 SNU13P55769 128 aaKnown RBP3.98□□□□□ -1.77
ATXN3-246ENST00000557030 TMEM33P57088 247 aa3.98□□□□□ -1.77
ATXN3-246ENST00000557030 SRPXP78539 464 aa3.98□□□□□ -1.77
ATXN3-246ENST00000557030 CLINT1Q14677 625 aa3.98□□□□□ -1.77
ATXN3-246ENST00000557030 HYAL4Q2M3T9 481 aa3.98□□□□□ -1.77
ATXN3-246ENST00000557030 SLC22A6Q4U2R8 563 aa3.98□□□□□ -1.77
ATXN3-246ENST00000557030 AKIRIN2Q53H80 203 aa3.98□□□□□ -1.77
ATXN3-246ENST00000557030 IGSF11Q5DX21 431 aa3.98□□□□□ -1.77
ATXN3-246ENST00000557030 AADACL3Q5VUY0 350 aa3.98□□□□□ -1.77
ATXN3-246ENST00000557030 ZNF600Q6ZNG1 722 aa3.98□□□□□ -1.77
ATXN3-246ENST00000557030 ASCL5Q7RTU5 278 aa3.98□□□□□ -1.77
ATXN3-246ENST00000557030 ABHD12BQ7Z5M8 362 aaPredicted RBP3.98□□□□□ -1.77
ATXN3-246ENST00000557030 COMMD2Q86X83 199 aa3.98□□□□□ -1.77
ATXN3-246ENST00000557030 GKN2Q86XP6 184 aa3.98□□□□□ -1.77
ATXN3-246ENST00000557030 OR5AS1Q8N127 324 aa3.98□□□□□ -1.77
ATXN3-246ENST00000557030 DEFB119Q8N690 84 aa3.98□□□□□ -1.77
ATXN3-246ENST00000557030 SUMF2Q8NBJ7 301 aa3.98□□□□□ -1.77
ATXN3-246ENST00000557030 OR51T1Q8NGJ9 327 aa3.98□□□□□ -1.77
ATXN3-246ENST00000557030 OR8U1Q8NH10 309 aa3.98□□□□□ -1.77
ATXN3-246ENST00000557030 OR51F2Q8NH61 342 aa3.98□□□□□ -1.77
ATXN3-246ENST00000557030 OR5R1Q8NH85 324 aa3.98□□□□□ -1.77
ATXN3-246ENST00000557030 OR51E1Q8TCB6 317 aa3.98□□□□□ -1.77
ATXN3-246ENST00000557030 SLC22A8Q8TCC7 542 aa3.98□□□□□ -1.77
ATXN3-246ENST00000557030 ZNF721Q8TF20 911 aa3.98□□□□□ -1.77
ATXN3-246ENST00000557030 RLN3Q8WXF3 142 aa3.98□□□□□ -1.77
ATXN3-246ENST00000557030 C11orf40Q8WZ69 217 aa3.98□□□□□ -1.77
ATXN3-246ENST00000557030 PIGTQ969N2 578 aa3.98□□□□□ -1.77
ATXN3-246ENST00000557030 ZNF524Q96C55 264 aa3.98□□□□□ -1.77
ATXN3-246ENST00000557030 ABHD14BQ96IU4 210 aa3.98□□□□□ -1.77
ATXN3-246ENST00000557030 C1orf147Q96MC9 270 aaPredicted RBP3.98□□□□□ -1.77
ATXN3-246ENST00000557030 TGM7Q96PF1 710 aa3.98□□□□□ -1.77
ATXN3-246ENST00000557030 NKX3-1Q99801 234 aaPredicted RBP3.98□□□□□ -1.77
ATXN3-246ENST00000557030 CITED2Q99967 270 aaPredicted RBP3.98□□□□□ -1.77
ATXN3-246ENST00000557030 NICN1Q9BSH3 213 aa3.98□□□□□ -1.77
ATXN3-246ENST00000557030 TM2D1Q9BX74 207 aa3.98□□□□□ -1.77
ATXN3-246ENST00000557030 PECRQ9BY49 303 aa3.98□□□□□ -1.77
ATXN3-246ENST00000557030 EIF5A2Q9GZV4 153 aaKnown RBP3.98□□□□□ -1.77
ATXN3-246ENST00000557030 WWTR1Q9GZV5 400 aa3.98□□□□□ -1.77
ATXN3-246ENST00000557030 TOLLIPQ9H0E2 274 aa3.98□□□□□ -1.77
ATXN3-246ENST00000557030 PTGES2Q9H7Z7 377 aa3.98□□□□□ -1.77
ATXN3-246ENST00000557030 UBE2ZQ9H832 354 aaPredicted RBP3.98□□□□□ -1.77
ATXN3-246ENST00000557030 SIRT7Q9NRC8 400 aa3.98□□□□□ -1.77
ATXN3-246ENST00000557030 SERINC1Q9NRX5 453 aa3.98□□□□□ -1.77
ATXN3-246ENST00000557030 C19orf12Q9NSK7 152 aa3.98□□□□□ -1.77
ATXN3-246ENST00000557030 SOHLH2Q9NX45 425 aa3.98□□□□□ -1.77
ATXN3-246ENST00000557030 TREM2Q9NZC2 230 aa3.98□□□□□ -1.77
ATXN3-246ENST00000557030 DHCR7Q9UBM7 475 aaKnown RBP3.98□□□□□ -1.77
ATXN3-246ENST00000557030 SCN2AQ99250 2005 aa3.98□□□□□ -1.77
ATXN3-246ENST00000557030 ZDBF2Q9HCK1 2354 aa3.98□□□□□ -1.77
ATXN3-246ENST00000557030 NUP210LQ5VU65 1888 aa3.97□□□□□ -1.77
ATXN3-246ENST00000557030 IGHV5-51A0A0C4DH38 117 aa3.97□□□□□ -1.77
ATXN3-246ENST00000557030 A0A0U1RQK1 487 aa3.97□□□□□ -1.77
ATXN3-246ENST00000557030 A0A0U1RQV5 110 aa3.97□□□□□ -1.77
ATXN3-246ENST00000557030 ZNF320A2RRD8 509 aa3.97□□□□□ -1.77
ATXN3-246ENST00000557030 VSTM2BA6NLU5 285 aa3.97□□□□□ -1.77
ATXN3-246ENST00000557030 B4DEV8 164 aa3.97□□□□□ -1.77
ATXN3-246ENST00000557030 SEC14L6B5MCN3 397 aa3.97□□□□□ -1.77
ATXN3-246ENST00000557030 HS3ST1O14792 307 aa3.97□□□□□ -1.77
ATXN3-246ENST00000557030 SOCS1O15524 211 aa3.97□□□□□ -1.77
ATXN3-246ENST00000557030 TXNL1O43396 289 aa3.97□□□□□ -1.77
ATXN3-246ENST00000557030 PRKNO60260 465 aaPredicted RBP3.97□□□□□ -1.77
ATXN3-246ENST00000557030 CLN5O75503 358 aa3.97□□□□□ -1.77
ATXN3-246ENST00000557030 IFNA10P01566 189 aa3.97□□□□□ -1.77
ATXN3-246ENST00000557030 IGHG1P01857 330 aa3.97□□□□□ -1.77
ATXN3-246ENST00000557030 HBE1P02100 147 aa3.97□□□□□ -1.77
ATXN3-246ENST00000557030 NQO2P16083 231 aa3.97□□□□□ -1.77
ATXN3-246ENST00000557030 BCKDHBP21953 392 aa3.97□□□□□ -1.77
ATXN3-246ENST00000557030 GLRA1P23415 457 aa3.97□□□□□ -1.77
ATXN3-246ENST00000557030 DTYMKP23919 212 aa3.97□□□□□ -1.77
ATXN3-246ENST00000557030 ACKR3P25106 362 aa3.97□□□□□ -1.77
ATXN3-246ENST00000557030 CD27P26842 260 aa3.97□□□□□ -1.77
ATXN3-246ENST00000557030 BLVRBP30043 206 aaPredicted RBP3.97□□□□□ -1.77
ATXN3-246ENST00000557030 PTGER4P35408 488 aa3.97□□□□□ -1.77
ATXN3-246ENST00000557030 GUCA1AP43080 201 aaPredicted RBP3.97□□□□□ -1.77
ATXN3-246ENST00000557030 OR1D4P47884 311 aa3.97□□□□□ -1.77
ATXN3-246ENST00000557030 HTR5AP47898 357 aa3.97□□□□□ -1.77
ATXN3-246ENST00000557030 CDX1P47902 265 aaPredicted RBP3.97□□□□□ -1.77
ATXN3-246ENST00000557030 FASLGP48023 281 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms