RNA–Protein interactions for RNA: ENST00000556994.5

SRP54-213, Transcript of signal recognition particle 54, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SRP54, Length 2,327 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-213ENST00000556994 SRD5A2P31213 254 aa9.72□□□□□ -0.85
SRP54-213ENST00000556994 SRYQ05066 204 aa9.72□□□□□ -0.85
SRP54-213ENST00000556994 ZFP36L1Q07352 338 aaKnown RBP9.72□□□□□ -0.85
SRP54-213ENST00000556994 Q6ZS49 121 aa9.72□□□□□ -0.85
SRP54-213ENST00000556994 BEND4Q6ZU67 534 aa9.72□□□□□ -0.85
SRP54-213ENST00000556994 C1orf87Q8N0U7 546 aa9.72□□□□□ -0.85
SRP54-213ENST00000556994 OR1K1Q8NGR3 316 aa9.72□□□□□ -0.85
SRP54-213ENST00000556994 M1APQ8TC57 530 aa9.72□□□□□ -0.85
SRP54-213ENST00000556994 SCGB1C1Q8TD33 95 aa9.72□□□□□ -0.85
SRP54-213ENST00000556994 SAP25Q8TEE9 199 aa9.72□□□□□ -0.85
SRP54-213ENST00000556994 SPSB4Q96A44 273 aa9.72□□□□□ -0.85
SRP54-213ENST00000556994 PRRG4Q9BZD6 226 aa9.72□□□□□ -0.85
SRP54-213ENST00000556994 ZNF552Q9H707 407 aaPredicted RBP9.72□□□□□ -0.85
SRP54-213ENST00000556994 TCFL5Q9UL49 500 aa9.72□□□□□ -0.85
SRP54-213ENST00000556994 KIAA2026Q5HYC2 2103 aa9.72□□□□□ -0.85
SRP54-213ENST00000556994 KIR2DS1A0A191URI9 304 aa9.71□□□□□ -0.85
SRP54-213ENST00000556994 CEBPZOSA8MTT3 80 aa9.71□□□□□ -0.85
SRP54-213ENST00000556994 CLDN34H7C241 214 aa9.71□□□□□ -0.85
SRP54-213ENST00000556994 DFFBO76075 338 aa9.71□□□□□ -0.85
SRP54-213ENST00000556994 NGFP01138 241 aa9.71□□□□□ -0.85
SRP54-213ENST00000556994 FGF5P12034 268 aa9.71□□□□□ -0.85
SRP54-213ENST00000556994 ZNF16P17020 682 aaPredicted RBP9.71□□□□□ -0.85
SRP54-213ENST00000556994 KIR2DS4P43632 304 aa9.71□□□□□ -0.85
SRP54-213ENST00000556994 KIR2DS1Q14954 304 aa9.71□□□□□ -0.85
SRP54-213ENST00000556994 HLA-BQ31612 363 aa9.71□□□□□ -0.85
SRP54-213ENST00000556994 H1FOOQ8IZA3 346 aaPredicted RBP9.71□□□□□ -0.85
SRP54-213ENST00000556994 Q8NFD4 153 aa9.71□□□□□ -0.85
SRP54-213ENST00000556994 OR2V1Q8NHB1 315 aa9.71□□□□□ -0.85
SRP54-213ENST00000556994 MRPL30Q8TCC3 161 aaKnown RBP9.71□□□□□ -0.85
SRP54-213ENST00000556994 TECTBQ96PL2 329 aa9.71□□□□□ -0.85
SRP54-213ENST00000556994 REPIN1Q9BWE0 567 aaKnown RBP9.71□□□□□ -0.85
SRP54-213ENST00000556994 OR51B6Q9H340 312 aa9.71□□□□□ -0.85
SRP54-213ENST00000556994 OR1A1Q9P1Q5 309 aa9.71□□□□□ -0.85
SRP54-213ENST00000556994 CACNG5Q9UF02 275 aa9.71□□□□□ -0.85
SRP54-213ENST00000556994 MRPS17Q9Y2R5 130 aaKnown RBP9.71□□□□□ -0.85
SRP54-213ENST00000556994 R4GN57 208 aa9.71□□□□□ -0.85
SRP54-213ENST00000556994 FAM186AA6NE01 2351 aa9.71□□□□□ -0.86
SRP54-213ENST00000556994 MUC3AQ02505 3323 aa9.71□□□□□ -0.86
SRP54-213ENST00000556994 A0A1B0GU03 582 aa9.71□□□□□ -0.86
SRP54-213ENST00000556994 DUXBA0A1W2PPF3 345 aa9.71□□□□□ -0.86
SRP54-213ENST00000556994 ZNF503-AS2A6NEH8 195 aa9.71□□□□□ -0.86
SRP54-213ENST00000556994 HMGB3O15347 200 aaKnown RBP9.71□□□□□ -0.86
SRP54-213ENST00000556994 PTBP3O95758 552 aaKnown RBP9.71□□□□□ -0.86
SRP54-213ENST00000556994 CYB5R3P00387 301 aaPredicted RBP9.71□□□□□ -0.86
SRP54-213ENST00000556994 IGKV1-39P01597 117 aa9.71□□□□□ -0.86
SRP54-213ENST00000556994 IGKV1D-39P04432 117 aa9.71□□□□□ -0.86
SRP54-213ENST00000556994 ELLP55199 621 aaPredicted RBP9.71□□□□□ -0.86
SRP54-213ENST00000556994 ARF1P84077 181 aaKnown RBP9.71□□□□□ -0.86
SRP54-213ENST00000556994 CLEC12BQ2HXU8 276 aa9.71□□□□□ -0.86
SRP54-213ENST00000556994 DPPA3Q6W0C5 159 aa9.71□□□□□ -0.86
SRP54-213ENST00000556994 MRPL21Q7Z2W9 205 aaKnown RBP9.71□□□□□ -0.86
SRP54-213ENST00000556994 MKXQ8IYA7 352 aa9.71□□□□□ -0.86
SRP54-213ENST00000556994 ZDHHC23Q8IYP9 409 aa9.71□□□□□ -0.86
SRP54-213ENST00000556994 NECAP1Q8NC96 275 aa9.71□□□□□ -0.86
SRP54-213ENST00000556994 OR10J5Q8NHC4 309 aa9.71□□□□□ -0.86
SRP54-213ENST00000556994 IFI44Q8TCB0 444 aa9.71□□□□□ -0.86
SRP54-213ENST00000556994 CA5BP1Q8WTZ4 195 aa9.71□□□□□ -0.86
SRP54-213ENST00000556994 MEGF10Q96KG7 1140 aa9.71□□□□□ -0.86
SRP54-213ENST00000556994 CABLES2Q9BTV7 478 aa9.71□□□□□ -0.86
SRP54-213ENST00000556994 PRDM14Q9GZV8 571 aa9.71□□□□□ -0.86
SRP54-213ENST00000556994 PLK3Q9H4B4 646 aa9.71□□□□□ -0.86
SRP54-213ENST00000556994 SDF2L1Q9HCN8 221 aa9.71□□□□□ -0.86
SRP54-213ENST00000556994 DEPPQ9NTK1 212 aa9.71□□□□□ -0.86
SRP54-213ENST00000556994 CISD1Q9NZ45 108 aaKnown RBP9.71□□□□□ -0.86
SRP54-213ENST00000556994 PPP1R3CQ9UQK1 317 aa9.71□□□□□ -0.86
SRP54-213ENST00000556994 PINLYPA6NC86 204 aa9.7□□□□□ -0.86
SRP54-213ENST00000556994 B4DEV8 164 aa9.7□□□□□ -0.86
SRP54-213ENST00000556994 DNPH1O43598 174 aa9.7□□□□□ -0.86
SRP54-213ENST00000556994 LILRA1O75019 489 aa9.7□□□□□ -0.86
SRP54-213ENST00000556994 CNOT4O95628 575 aaKnown RBP9.7□□□□□ -0.86
SRP54-213ENST00000556994 CLN3Q13286 438 aa9.7□□□□□ -0.86
SRP54-213ENST00000556994 WDR25Q64LD2 544 aaPredicted RBP9.7□□□□□ -0.86
SRP54-213ENST00000556994 ZNF324BQ6AW86 544 aaPredicted RBP9.7□□□□□ -0.86
SRP54-213ENST00000556994 ABLIM2Q6H8Q1 611 aa9.7□□□□□ -0.86
SRP54-213ENST00000556994 HAPLN4Q86UW8 402 aa9.7□□□□□ -0.86
SRP54-213ENST00000556994 SPEM1Q8N4L4 309 aa9.7□□□□□ -0.86
SRP54-213ENST00000556994 OR13D1Q8NGV5 346 aa9.7□□□□□ -0.86
SRP54-213ENST00000556994 KCNE4Q8WWG9 221 aa9.7□□□□□ -0.86
SRP54-213ENST00000556994 CLDN23Q96B33 292 aa9.7□□□□□ -0.86
SRP54-213ENST00000556994 RCC1LQ96I51 464 aaKnown RBP9.7□□□□□ -0.86
SRP54-213ENST00000556994 ADGRG7Q96K78 797 aa9.7□□□□□ -0.86
SRP54-213ENST00000556994 PACRGQ96M98 296 aaPredicted RBP9.7□□□□□ -0.86
SRP54-213ENST00000556994 RBKSQ9H477 322 aa9.7□□□□□ -0.86
SRP54-213ENST00000556994 SMOC1Q9H4F8 434 aa9.7□□□□□ -0.86
SRP54-213ENST00000556994 PRDM6Q9NQX0 595 aa9.7□□□□□ -0.86
SRP54-213ENST00000556994 PSENENQ9NZ42 101 aa9.7□□□□□ -0.86
SRP54-213ENST00000556994 OR14J1Q9UGF5 321 aa9.7□□□□□ -0.86
SRP54-213ENST00000556994 OR2W1Q9Y3N9 320 aa9.7□□□□□ -0.86
SRP54-213ENST00000556994 ESPL1Q14674 2120 aa9.7□□□□□ -0.86
SRP54-213ENST00000556994 ELOA3CA0A087WX78 387 aaPredicted RBP9.7□□□□□ -0.86
SRP54-213ENST00000556994 TRAV1-1A0A0B4J248 108 aa9.7□□□□□ -0.86
SRP54-213ENST00000556994 A0A1B0GV90 55 aa9.7□□□□□ -0.86
SRP54-213ENST00000556994 FAM90A10PA6NDY2 464 aa9.7□□□□□ -0.86
SRP54-213ENST00000556994 FAM90A18PA6NE21 464 aa9.7□□□□□ -0.86
SRP54-213ENST00000556994 FAM90A16PA6NEW6 464 aa9.7□□□□□ -0.86
SRP54-213ENST00000556994 FAM90A20PA6NIJ5 464 aa9.7□□□□□ -0.86
SRP54-213ENST00000556994 FAM90A8PA6NJQ4 464 aa9.7□□□□□ -0.86
SRP54-213ENST00000556994 LRRC3CA6NJW4 275 aa9.7□□□□□ -0.86
SRP54-213ENST00000556994 FAM90A7PA6NKC0 464 aa9.7□□□□□ -0.86
SRP54-213ENST00000556994 FAM90A22PA8MWA6 464 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms