RNA–Protein interactions for RNA: ENST00000556952.3

SIX4-203, Transcript of SIX homeobox 4, humanhuman

TSL 5

Gene SIX4, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-203ENST00000556952 MIOXQ9UGB7 285 aa19.68■□□□□ 0.74
SIX4-203ENST00000556952 ZNF469Q96JG9 3925 aaPredicted RBP19.68■□□□□ 0.74
SIX4-203ENST00000556952 TRBV6-7A0A0A0MS04 114 aa19.67■□□□□ 0.74
SIX4-203ENST00000556952 IGKV1-6A0A0C4DH72 117 aa19.67■□□□□ 0.74
SIX4-203ENST00000556952 DVL1O14640 695 aa19.67■□□□□ 0.74
SIX4-203ENST00000556952 ARPC1BO15143 372 aaKnown RBP19.67■□□□□ 0.74
SIX4-203ENST00000556952 BET1O15155 118 aa19.67■□□□□ 0.74
SIX4-203ENST00000556952 PEX14O75381 377 aa19.67■□□□□ 0.74
SIX4-203ENST00000556952 IGHV4-39P01824 125 aa19.67■□□□□ 0.74
SIX4-203ENST00000556952 GPR6P46095 362 aaPredicted RBP19.67■□□□□ 0.74
SIX4-203ENST00000556952 MECP2P51608 486 aaKnown RBP19.67■□□□□ 0.74
SIX4-203ENST00000556952 AADACL3Q5VUY0 350 aa19.67■□□□□ 0.74
SIX4-203ENST00000556952 SCGB3A2Q96PL1 93 aa19.67■□□□□ 0.74
SIX4-203ENST00000556952 RAB9BQ9NP90 201 aa19.67■□□□□ 0.74
SIX4-203ENST00000556952 LPAR3Q9UBY5 353 aa19.67■□□□□ 0.74
SIX4-203ENST00000556952 PAX1P15863 534 aa19.66■□□□□ 0.74
SIX4-203ENST00000556952 RPS2P15880 293 aaKnown RBP19.66■□□□□ 0.74
SIX4-203ENST00000556952 FCGR2CP31995 323 aa19.66■□□□□ 0.74
SIX4-203ENST00000556952 MEF2CQ06413 473 aaPredicted RBP19.66■□□□□ 0.74
SIX4-203ENST00000556952 SURF2Q15527 256 aaPredicted RBP19.66■□□□□ 0.74
SIX4-203ENST00000556952 CARTPTQ16568 116 aa19.66■□□□□ 0.74
SIX4-203ENST00000556952 NLRC3Q7RTR2 1065 aa19.66■□□□□ 0.74
SIX4-203ENST00000556952 OR10J5Q8NHC4 309 aa19.66■□□□□ 0.74
SIX4-203ENST00000556952 GALMQ96C23 342 aa19.66■□□□□ 0.74
SIX4-203ENST00000556952 GSX2Q9BZM3 304 aa19.66■□□□□ 0.74
SIX4-203ENST00000556952 FLVCR2Q9UPI3 526 aa19.66■□□□□ 0.74
SIX4-203ENST00000556952 TRGV10A0A0A0MS01 117 aa19.66■□□□□ 0.74
SIX4-203ENST00000556952 SPINT2O43291 252 aa19.66■□□□□ 0.74
SIX4-203ENST00000556952 FPR2P25090 351 aa19.66■□□□□ 0.74
SIX4-203ENST00000556952 TATDN3Q17R31 274 aa19.66■□□□□ 0.74
SIX4-203ENST00000556952 KRTAP1-3Q8IUG1 177 aa19.66■□□□□ 0.74
SIX4-203ENST00000556952 PRR18Q8N4B5 295 aa19.66■□□□□ 0.74
SIX4-203ENST00000556952 IL1F10Q8WWZ1 152 aa19.66■□□□□ 0.74
SIX4-203ENST00000556952 CORO2AQ92828 525 aa19.66■□□□□ 0.74
SIX4-203ENST00000556952 KIAA2026Q5HYC2 2103 aa19.65■□□□□ 0.74
SIX4-203ENST00000556952 hCG_2014768A0A024R1R8 64 aa19.65■□□□□ 0.74
SIX4-203ENST00000556952 hADV38S2A0JD32 116 aa19.65■□□□□ 0.74
SIX4-203ENST00000556952 OR5H14A6NHG9 310 aa19.65■□□□□ 0.74
SIX4-203ENST00000556952 GPR37O15354 613 aa19.65■□□□□ 0.74
SIX4-203ENST00000556952 PRAF2O60831 178 aa19.65■□□□□ 0.74
SIX4-203ENST00000556952 FCN3O75636 299 aa19.65■□□□□ 0.74
SIX4-203ENST00000556952 HBZP02008 142 aa19.65■□□□□ 0.74
SIX4-203ENST00000556952 IL2RGP31785 369 aa19.65■□□□□ 0.74
SIX4-203ENST00000556952 C5orf24Q7Z6I8 188 aa19.65■□□□□ 0.74
SIX4-203ENST00000556952 OR8B3Q8NGG8 313 aa19.65■□□□□ 0.74
SIX4-203ENST00000556952 NEIL1Q96FI4 390 aaPredicted RBP19.65■□□□□ 0.74
SIX4-203ENST00000556952 OR8B2Q96RD0 313 aa19.65■□□□□ 0.74
SIX4-203ENST00000556952 LINC00312Q9Y6C7 94 aa19.65■□□□□ 0.74
SIX4-203ENST00000556952 C15orf65H3BRN8 121 aa19.64■□□□□ 0.73
SIX4-203ENST00000556952 TUSC2O75896 110 aa19.64■□□□□ 0.73
SIX4-203ENST00000556952 RLN1P04808 185 aa19.64■□□□□ 0.73
SIX4-203ENST00000556952 SSTR5P35346 364 aa19.64■□□□□ 0.73
SIX4-203ENST00000556952 NPY4RP50391 375 aa19.64■□□□□ 0.73
SIX4-203ENST00000556952 PDLIM4P50479 330 aa19.64■□□□□ 0.73
SIX4-203ENST00000556952 RAB25P57735 213 aa19.64■□□□□ 0.73
SIX4-203ENST00000556952 HERV-K104P61576 105 aa19.64■□□□□ 0.73
SIX4-203ENST00000556952 LRRC75A-AS1Q8N1F1 130 aa19.64■□□□□ 0.73
SIX4-203ENST00000556952 FGFRL1Q8N441 504 aa19.64■□□□□ 0.73
SIX4-203ENST00000556952 ZNF525Q8N782 197 aa19.64■□□□□ 0.73
SIX4-203ENST00000556952 MARCH1Q8TCQ1 289 aa19.64■□□□□ 0.73
SIX4-203ENST00000556952 ARL11Q969Q4 196 aa19.64■□□□□ 0.73
SIX4-203ENST00000556952 MOB3AQ96BX8 217 aa19.64■□□□□ 0.73
SIX4-203ENST00000556952 DCTN5Q9BTE1 182 aa19.64■□□□□ 0.73
SIX4-203ENST00000556952 VSIG4Q9Y279 399 aa19.64■□□□□ 0.73
SIX4-203ENST00000556952 UBE2J1Q9Y385 318 aaPredicted RBP19.64■□□□□ 0.73
SIX4-203ENST00000556952 PPYP01298 95 aa19.63■□□□□ 0.73
SIX4-203ENST00000556952 NFYAP23511 347 aaPredicted RBP19.63■□□□□ 0.73
SIX4-203ENST00000556952 ZBTB25P24278 435 aa19.63■□□□□ 0.73
SIX4-203ENST00000556952 ATP5J2P56134 94 aa19.63■□□□□ 0.73
SIX4-203ENST00000556952 RPL31P62899 125 aaKnown RBP19.63■□□□□ 0.73
SIX4-203ENST00000556952 HTD2P86397 168 aa19.63■□□□□ 0.73
SIX4-203ENST00000556952 H1FOOQ8IZA3 346 aaPredicted RBP19.63■□□□□ 0.73
SIX4-203ENST00000556952 OR1L1Q8NH94 360 aa19.63■□□□□ 0.73
SIX4-203ENST00000556952 TMPRSS13Q9BYE2 586 aa19.63■□□□□ 0.73
SIX4-203ENST00000556952 FXYD6Q9H0Q3 95 aa19.63■□□□□ 0.73
SIX4-203ENST00000556952 SLC23A1Q9UHI7 598 aa19.63■□□□□ 0.73
SIX4-203ENST00000556952 TRBV23-1A0A0A0MS06 115 aa19.62■□□□□ 0.73
SIX4-203ENST00000556952 A0A0B4J293 547 aa19.62■□□□□ 0.73
SIX4-203ENST00000556952 ZNF729A6NN14 1252 aaPredicted RBP19.62■□□□□ 0.73
SIX4-203ENST00000556952 HSPA12AO43301 675 aa19.62■□□□□ 0.73
SIX4-203ENST00000556952 CGB3P0DN86 165 aa19.62■□□□□ 0.73
SIX4-203ENST00000556952 CGB7P0DN87 165 aa19.62■□□□□ 0.73
SIX4-203ENST00000556952 AADACP22760 399 aa19.62■□□□□ 0.73
SIX4-203ENST00000556952 ZNF841Q6ZN19 808 aa19.62■□□□□ 0.73
SIX4-203ENST00000556952 TCF23Q7RTU1 214 aa19.62■□□□□ 0.73
SIX4-203ENST00000556952 ALX4Q9H161 411 aaPredicted RBP19.62■□□□□ 0.73
SIX4-203ENST00000556952 PATZ1Q9HBE1 687 aaKnown RBP19.62■□□□□ 0.73
SIX4-203ENST00000556952 TAS2R3Q9NYW6 316 aa19.62■□□□□ 0.73
SIX4-203ENST00000556952 CALYQ9NYX4 217 aa19.62■□□□□ 0.73
SIX4-203ENST00000556952 ZNF69Q9UC07 566 aa19.62■□□□□ 0.73
SIX4-203ENST00000556952 GPR132Q9UNW8 380 aa19.62■□□□□ 0.73
SIX4-203ENST00000556952 F5H0A9 414 aaPredicted RBP19.61■□□□□ 0.73
SIX4-203ENST00000556952 HEXAP06865 529 aa19.61■□□□□ 0.73
SIX4-203ENST00000556952 WNT2P09544 360 aa19.61■□□□□ 0.73
SIX4-203ENST00000556952 UCP3P55916 312 aa19.61■□□□□ 0.73
SIX4-203ENST00000556952 TMEM30BQ3MIR4 351 aa19.61■□□□□ 0.73
SIX4-203ENST00000556952 H1FXQ92522 213 aaKnown RBP19.61■□□□□ 0.73
SIX4-203ENST00000556952 TOLLIPQ9H0E2 274 aa19.61■□□□□ 0.73
SIX4-203ENST00000556952 OR1A1Q9P1Q5 309 aa19.61■□□□□ 0.73
SIX4-203ENST00000556952 KBTBD11-OT1A0A1B0GTJ5 212 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms