RNA–Protein interactions for RNA: ENST00000556876.1

CHGA-206, Transcript of chromogranin A, humanhuman

TSL 2

Gene CHGA, Length 912 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-206ENST00000556876 ZNF497Q6ZNH5 498 aa13.5□□□□□ -0.25
CHGA-206ENST00000556876 ZNF555Q8NEP9 628 aa13.5□□□□□ -0.25
CHGA-206ENST00000556876 BABAM2Q9NXR7 383 aa13.5□□□□□ -0.25
CHGA-206ENST00000556876 H3BNX3 289 aa13.49□□□□□ -0.25
CHGA-206ENST00000556876 AIPO00170 330 aa13.49□□□□□ -0.25
CHGA-206ENST00000556876 GEMIN2O14893 280 aaKnown RBP13.49□□□□□ -0.25
CHGA-206ENST00000556876 LIMS3P0CW19 117 aa13.49□□□□□ -0.25
CHGA-206ENST00000556876 LIMS4P0CW20 117 aa13.49□□□□□ -0.25
CHGA-206ENST00000556876 MYL12AP19105 171 aa13.49□□□□□ -0.25
CHGA-206ENST00000556876 INSL3P51460 131 aa13.49□□□□□ -0.25
CHGA-206ENST00000556876 ZNF554Q86TJ5 538 aa13.49□□□□□ -0.25
CHGA-206ENST00000556876 Q8N9W7 124 aa13.49□□□□□ -0.25
CHGA-206ENST00000556876 THRSPQ92748 146 aa13.49□□□□□ -0.25
CHGA-206ENST00000556876 ST6GALNAC6Q969X2 333 aa13.49□□□□□ -0.25
CHGA-206ENST00000556876 SMIM19Q96E16 107 aa13.49□□□□□ -0.25
CHGA-206ENST00000556876 S1PR3Q99500 378 aa13.49□□□□□ -0.25
CHGA-206ENST00000556876 GNG12Q9UBI6 72 aa13.49□□□□□ -0.25
CHGA-206ENST00000556876 LINC00527Q9UJ94 153 aa13.49□□□□□ -0.25
CHGA-206ENST00000556876 TRAPPC2LQ9UL33 140 aa13.49□□□□□ -0.25
CHGA-206ENST00000556876 LRRC42Q9Y546 428 aa13.49□□□□□ -0.25
CHGA-206ENST00000556876 FAM90A10PA6NDY2 464 aa13.48□□□□□ -0.25
CHGA-206ENST00000556876 FAM90A7PA6NKC0 464 aa13.48□□□□□ -0.25
CHGA-206ENST00000556876 FAM90A23PA8MXZ1 464 aa13.48□□□□□ -0.25
CHGA-206ENST00000556876 OGG1O15527 345 aa13.48□□□□□ -0.25
CHGA-206ENST00000556876 IGHG4P01861 327 aa13.48□□□□□ -0.25
CHGA-206ENST00000556876 IGF1P05019 195 aa13.48□□□□□ -0.25
CHGA-206ENST00000556876 SERPINA2P20848 420 aa13.48□□□□□ -0.25
CHGA-206ENST00000556876 REG1BP48304 166 aa13.48□□□□□ -0.25
CHGA-206ENST00000556876 GTF2A1P52655 376 aaPredicted RBP13.48□□□□□ -0.25
CHGA-206ENST00000556876 RAB25P57735 213 aa13.48□□□□□ -0.25
CHGA-206ENST00000556876 SLC22A6Q4U2R8 563 aa13.48□□□□□ -0.25
CHGA-206ENST00000556876 YIF1BQ5BJH7 314 aa13.48□□□□□ -0.25
CHGA-206ENST00000556876 C11orf87Q6NUJ2 197 aa13.48□□□□□ -0.25
CHGA-206ENST00000556876 LCNL1Q6ZST4 164 aa13.48□□□□□ -0.25
CHGA-206ENST00000556876 SLC25A48Q6ZT89 311 aaKnown RBP13.48□□□□□ -0.25
CHGA-206ENST00000556876 TMEM104Q8NE00 496 aa13.48□□□□□ -0.25
CHGA-206ENST00000556876 RAX2Q96IS3 184 aa13.48□□□□□ -0.25
CHGA-206ENST00000556876 EXOSC1Q9Y3B2 195 aaKnown RBP13.48□□□□□ -0.25
CHGA-206ENST00000556876 DNAH9Q9NYC9 4486 aa13.47□□□□□ -0.25
CHGA-206ENST00000556876 A0A1W2PPE3 182 aa13.47□□□□□ -0.25
CHGA-206ENST00000556876 TMEM65Q6PI78 240 aa13.47□□□□□ -0.25
CHGA-206ENST00000556876 C4orf3Q8WVX3 66 aa13.47□□□□□ -0.25
CHGA-206ENST00000556876 TFAP2CQ92754 450 aa13.47□□□□□ -0.25
CHGA-206ENST00000556876 ZNF184Q99676 751 aaPredicted RBP13.47□□□□□ -0.25
CHGA-206ENST00000556876 PLSCR3Q9NRY6 295 aa13.47□□□□□ -0.25
CHGA-206ENST00000556876 KCNIP1Q9NZI2 227 aa13.47□□□□□ -0.25
CHGA-206ENST00000556876 RCC2Q9P258 522 aaKnown RBP13.47□□□□□ -0.25
CHGA-206ENST00000556876 AASSQ9UDR5 926 aa13.47□□□□□ -0.25
CHGA-206ENST00000556876 ERGIC3Q9Y282 383 aa13.47□□□□□ -0.25
CHGA-206ENST00000556876 COL7A1Q02388 2944 aa13.47□□□□□ -0.25
CHGA-206ENST00000556876 IGHV3-72A0A0B4J1Y9 119 aa13.46□□□□□ -0.25
CHGA-206ENST00000556876 LANCL1O43813 399 aa13.46□□□□□ -0.25
CHGA-206ENST00000556876 RPLP1P05386 114 aaKnown RBP13.46□□□□□ -0.25
CHGA-206ENST00000556876 Q499Y3 187 aa13.46□□□□□ -0.25
CHGA-206ENST00000556876 FAM71E2Q8N5Q1 922 aa13.46□□□□□ -0.25
CHGA-206ENST00000556876 CCDC107Q8WV48 283 aa13.46□□□□□ -0.25
CHGA-206ENST00000556876 RGP1Q92546 391 aaPredicted RBP13.46□□□□□ -0.25
CHGA-206ENST00000556876 GHSRQ92847 366 aa13.46□□□□□ -0.25
CHGA-206ENST00000556876 ETAA1Q9NY74 926 aa13.46□□□□□ -0.25
CHGA-206ENST00000556876 GHRLQ9UBU3 117 aa13.46□□□□□ -0.25
CHGA-206ENST00000556876 DIMT1Q9UNQ2 313 aaKnown RBP13.46□□□□□ -0.25
CHGA-206ENST00000556876 TRAV39A0A0B4J263 110 aa13.45□□□□□ -0.26
CHGA-206ENST00000556876 RGS11O94810 467 aa13.45□□□□□ -0.26
CHGA-206ENST00000556876 IGFBP3P17936 291 aaPredicted RBP13.45□□□□□ -0.26
CHGA-206ENST00000556876 FSTP19883 344 aa13.45□□□□□ -0.26
CHGA-206ENST00000556876 TAS2R43P59537 309 aa13.45□□□□□ -0.26
CHGA-206ENST00000556876 SYT6Q5T7P8 510 aaPredicted RBP13.45□□□□□ -0.26
CHGA-206ENST00000556876 C18orf65Q6ZTR6 163 aa13.45□□□□□ -0.26
CHGA-206ENST00000556876 GAPTQ8N292 157 aa13.45□□□□□ -0.26
CHGA-206ENST00000556876 UBE2E2Q96LR5 201 aa13.45□□□□□ -0.26
CHGA-206ENST00000556876 C8orf4Q9NR00 106 aa13.45□□□□□ -0.26
CHGA-206ENST00000556876 U3KQK5 164 aa13.45□□□□□ -0.26
CHGA-206ENST00000556876 TRBV5-5A0A0J9YX44 114 aa13.44□□□□□ -0.26
CHGA-206ENST00000556876 LINC01548A6NM66 108 aa13.44□□□□□ -0.26
CHGA-206ENST00000556876 SEC14L6B5MCN3 397 aa13.44□□□□□ -0.26
CHGA-206ENST00000556876 C12orf77C9JDV5 145 aa13.44□□□□□ -0.26
CHGA-206ENST00000556876 OR8U8P0C7N1 319 aa13.44□□□□□ -0.26
CHGA-206ENST00000556876 FUT3P21217 361 aa13.44□□□□□ -0.26
CHGA-206ENST00000556876 PSMB8P28062 276 aa13.44□□□□□ -0.26
CHGA-206ENST00000556876 ETV1P50549 477 aa13.44□□□□□ -0.26
CHGA-206ENST00000556876 CFHR3Q02985 330 aa13.44□□□□□ -0.26
CHGA-206ENST00000556876 LY6G6FQ5SQ64 297 aa13.44□□□□□ -0.26
CHGA-206ENST00000556876 DMKNQ6E0U4 476 aaPredicted RBP13.44□□□□□ -0.26
CHGA-206ENST00000556876 RAB12Q6IQ22 244 aa13.44□□□□□ -0.26
CHGA-206ENST00000556876 PQLC1Q8N2U9 271 aa13.44□□□□□ -0.26
CHGA-206ENST00000556876 TMEM80Q96HE8 168 aa13.44□□□□□ -0.26
CHGA-206ENST00000556876 S100A14Q9HCY8 104 aa13.44□□□□□ -0.26
CHGA-206ENST00000556876 SMPD3Q9NY59 655 aaPredicted RBP13.44□□□□□ -0.26
CHGA-206ENST00000556876 ZNF107Q9UII5 783 aaPredicted RBP13.44□□□□□ -0.26
CHGA-206ENST00000556876 MRPS28Q9Y2Q9 187 aaKnown RBP13.44□□□□□ -0.26
CHGA-206ENST00000556876 LSM4Q9Y4Z0 139 aaKnown RBP13.44□□□□□ -0.26
CHGA-206ENST00000556876 PEX16Q9Y5Y5 336 aa13.44□□□□□ -0.26
CHGA-206ENST00000556876 HBZP02008 142 aa13.43□□□□□ -0.26
CHGA-206ENST00000556876 RUNX1Q01196 453 aa13.43□□□□□ -0.26
CHGA-206ENST00000556876 CT45A1Q5HYN5 189 aa13.43□□□□□ -0.26
CHGA-206ENST00000556876 TTC23Q5W5X9 447 aa13.43□□□□□ -0.26
CHGA-206ENST00000556876 GLIPR1L1Q6UWM5 242 aa13.43□□□□□ -0.26
CHGA-206ENST00000556876 JAGN1Q8N5M9 183 aa13.43□□□□□ -0.26
CHGA-206ENST00000556876 NKAIN3Q8N8D7 197 aa13.43□□□□□ -0.26
CHGA-206ENST00000556876 ZNF439Q8NDP4 499 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms