RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 OR4F4Q96R69 305 aa5.88□□□□□ -1.47
SCFD1-222ENST00000556768 PPIL3Q9H2H8 161 aaKnown RBP5.88□□□□□ -1.47
SCFD1-222ENST00000556768 ZNF286AQ9HBT8 521 aa5.88□□□□□ -1.47
SCFD1-222ENST00000556768 GHRLQ9UBU3 117 aa5.88□□□□□ -1.47
SCFD1-222ENST00000556768 TRAPPC2LQ9UL33 140 aa5.88□□□□□ -1.47
SCFD1-222ENST00000556768 SIRT4Q9Y6E7 314 aaPredicted RBP5.88□□□□□ -1.47
SCFD1-222ENST00000556768 TRBV5-5A0A0J9YX44 114 aa5.88□□□□□ -1.47
SCFD1-222ENST00000556768 CA11O75493 328 aa5.88□□□□□ -1.47
SCFD1-222ENST00000556768 OR2F2O95006 317 aa5.88□□□□□ -1.47
SCFD1-222ENST00000556768 OPN1MWP04001 364 aa5.88□□□□□ -1.47
SCFD1-222ENST00000556768 AMY1AP04745 511 aa5.88□□□□□ -1.47
SCFD1-222ENST00000556768 CD1AP06126 327 aa5.88□□□□□ -1.47
SCFD1-222ENST00000556768 OPN1MW2P0DN77 364 aa5.88□□□□□ -1.47
SCFD1-222ENST00000556768 OPN1MW3P0DN78 364 aa5.88□□□□□ -1.47
SCFD1-222ENST00000556768 FSTP19883 344 aa5.88□□□□□ -1.47
SCFD1-222ENST00000556768 LORP23490 312 aaPredicted RBP5.88□□□□□ -1.47
SCFD1-222ENST00000556768 CD24P25063 80 aa5.88□□□□□ -1.47
SCFD1-222ENST00000556768 RANBP1P43487 201 aa5.88□□□□□ -1.47
SCFD1-222ENST00000556768 RAB7AP51149 207 aa5.88□□□□□ -1.47
SCFD1-222ENST00000556768 HABP2Q14520 560 aaPredicted RBP5.88□□□□□ -1.47
SCFD1-222ENST00000556768 C17orf58Q2M2W7 97 aa5.88□□□□□ -1.47
SCFD1-222ENST00000556768 NSUN5P1Q3KNT7 163 aa5.88□□□□□ -1.47
SCFD1-222ENST00000556768 ABCA11PQ4W5N1 156 aa5.88□□□□□ -1.47
SCFD1-222ENST00000556768 LDLRAD2Q5SZI1 272 aa5.88□□□□□ -1.47
SCFD1-222ENST00000556768 TPTE2P1Q5T6R2 138 aa5.88□□□□□ -1.47
SCFD1-222ENST00000556768 GLIPR1L1Q6UWM5 242 aa5.88□□□□□ -1.47
SCFD1-222ENST00000556768 NANOGP1Q8N7R0 232 aa5.88□□□□□ -1.47
SCFD1-222ENST00000556768 OR13A1Q8NGR1 328 aa5.88□□□□□ -1.47
SCFD1-222ENST00000556768 OR13C5Q8NGS8 318 aa5.88□□□□□ -1.47
SCFD1-222ENST00000556768 CFHR4Q92496 578 aa5.88□□□□□ -1.47
SCFD1-222ENST00000556768 TFAP2CQ92754 450 aa5.88□□□□□ -1.47
SCFD1-222ENST00000556768 R3HDM4Q96D70 268 aa5.88□□□□□ -1.47
SCFD1-222ENST00000556768 RBM14Q96PK6 669 aaKnown RBP5.88□□□□□ -1.47
SCFD1-222ENST00000556768 UQCC2Q9BRT2 126 aa5.88□□□□□ -1.47
SCFD1-222ENST00000556768 SLC25A33Q9BSK2 321 aa5.88□□□□□ -1.47
SCFD1-222ENST00000556768 CST11Q9H112 138 aa5.88□□□□□ -1.47
SCFD1-222ENST00000556768 LINC00574Q9H8X3 128 aa5.88□□□□□ -1.47
SCFD1-222ENST00000556768 ZNF702PQ9H963 129 aa5.88□□□□□ -1.47
SCFD1-222ENST00000556768 PSG11Q9UQ72 335 aa5.88□□□□□ -1.47
SCFD1-222ENST00000556768 MRPS28Q9Y2Q9 187 aaKnown RBP5.88□□□□□ -1.47
SCFD1-222ENST00000556768 TPRKBQ9Y3C4 175 aa5.88□□□□□ -1.47
SCFD1-222ENST00000556768 NPIPB11E5RHQ5 1161 aa5.87□□□□□ -1.47
SCFD1-222ENST00000556768 AIPO00170 330 aa5.87□□□□□ -1.47
SCFD1-222ENST00000556768 ORC5O43913 435 aa5.87□□□□□ -1.47
SCFD1-222ENST00000556768 CRTAPO75718 401 aaPredicted RBP5.87□□□□□ -1.47
SCFD1-222ENST00000556768 LALBAP00709 142 aa5.87□□□□□ -1.47
SCFD1-222ENST00000556768 GAPDHP04406 335 aaKnown RBP5.87□□□□□ -1.47
SCFD1-222ENST00000556768 IGFBP3P17936 291 aaPredicted RBP5.87□□□□□ -1.47
SCFD1-222ENST00000556768 IL3RAP26951 378 aa5.87□□□□□ -1.47
SCFD1-222ENST00000556768 GPR50Q13585 617 aa5.87□□□□□ -1.47
SCFD1-222ENST00000556768 MED22Q15528 200 aa5.87□□□□□ -1.47
SCFD1-222ENST00000556768 C9orf152Q5JTZ5 239 aa5.87□□□□□ -1.47
SCFD1-222ENST00000556768 C6orf183Q5T699 404 aa5.87□□□□□ -1.47
SCFD1-222ENST00000556768 RSBN1Q5VWQ0 802 aaPredicted RBP5.87□□□□□ -1.47
SCFD1-222ENST00000556768 TRAT1Q6PIZ9 186 aa5.87□□□□□ -1.47
SCFD1-222ENST00000556768 NDUFA11Q86Y39 141 aa5.87□□□□□ -1.47
SCFD1-222ENST00000556768 OR8H3Q8N146 312 aa5.87□□□□□ -1.47
SCFD1-222ENST00000556768 OR5AU1Q8NGC0 362 aa5.87□□□□□ -1.47
SCFD1-222ENST00000556768 OR4X2Q8NGF9 303 aa5.87□□□□□ -1.47
SCFD1-222ENST00000556768 OR52M1Q8NGK5 317 aa5.87□□□□□ -1.47
SCFD1-222ENST00000556768 ORAI1Q96D31 301 aa5.87□□□□□ -1.47
SCFD1-222ENST00000556768 PGLYRP3Q96LB9 341 aa5.87□□□□□ -1.47
SCFD1-222ENST00000556768 SELENOIQ9C0D9 397 aa5.87□□□□□ -1.47
SCFD1-222ENST00000556768 SERTAD4Q9NUC0 356 aa5.87□□□□□ -1.47
SCFD1-222ENST00000556768 KCNIP1Q9NZI2 227 aa5.87□□□□□ -1.47
SCFD1-222ENST00000556768 PEX16Q9Y5Y5 336 aa5.87□□□□□ -1.47
SCFD1-222ENST00000556768 WNK1Q9H4A3 2382 aa5.87□□□□□ -1.47
SCFD1-222ENST00000556768 TRAV8-7A0A075B6U6 113 aa5.86□□□□□ -1.47
SCFD1-222ENST00000556768 TRBV5-7A0A0A0MS05 114 aa5.86□□□□□ -1.47
SCFD1-222ENST00000556768 FAM90A10PA6NDY2 464 aa5.86□□□□□ -1.47
SCFD1-222ENST00000556768 FAM90A18PA6NE21 464 aa5.86□□□□□ -1.47
SCFD1-222ENST00000556768 FAM90A16PA6NEW6 464 aa5.86□□□□□ -1.47
SCFD1-222ENST00000556768 FAM90A20PA6NIJ5 464 aa5.86□□□□□ -1.47
SCFD1-222ENST00000556768 FAM90A7PA6NKC0 464 aa5.86□□□□□ -1.47
SCFD1-222ENST00000556768 FAM90A12PA8MX19 464 aa5.86□□□□□ -1.47
SCFD1-222ENST00000556768 FAM90A5PA8MXJ8 464 aa5.86□□□□□ -1.47
SCFD1-222ENST00000556768 FAM90A23PA8MXZ1 464 aa5.86□□□□□ -1.47
SCFD1-222ENST00000556768 ANKRD65E5RJM6 399 aa5.86□□□□□ -1.47
SCFD1-222ENST00000556768 H0YHG0 523 aa5.86□□□□□ -1.47
SCFD1-222ENST00000556768 CCRL2O00421 344 aa5.86□□□□□ -1.47
SCFD1-222ENST00000556768 SDCBPO00560 298 aaPredicted RBP5.86□□□□□ -1.47
SCFD1-222ENST00000556768 WIPF1O43516 503 aa5.86□□□□□ -1.47
SCFD1-222ENST00000556768 TSPAN15O95858 294 aa5.86□□□□□ -1.47
SCFD1-222ENST00000556768 IGHV3-7P01780 117 aa5.86□□□□□ -1.47
SCFD1-222ENST00000556768 GLAP06280 429 aa5.86□□□□□ -1.47
SCFD1-222ENST00000556768 CDK1P06493 297 aa5.86□□□□□ -1.47
SCFD1-222ENST00000556768 FAM90A15PP0C7V4 464 aa5.86□□□□□ -1.47
SCFD1-222ENST00000556768 FAM90A13PP0C7W8 464 aa5.86□□□□□ -1.47
SCFD1-222ENST00000556768 FAM90A14PP0C7W9 464 aa5.86□□□□□ -1.47
SCFD1-222ENST00000556768 FAM90A24PP0C7X0 464 aa5.86□□□□□ -1.47
SCFD1-222ENST00000556768 UBBP0CG47 229 aa5.86□□□□□ -1.47
SCFD1-222ENST00000556768 CGB3P0DN86 165 aa5.86□□□□□ -1.47
SCFD1-222ENST00000556768 CGB7P0DN87 165 aa5.86□□□□□ -1.47
SCFD1-222ENST00000556768 FUT3P21217 361 aa5.86□□□□□ -1.47
SCFD1-222ENST00000556768 SSTR5P35346 364 aa5.86□□□□□ -1.47
SCFD1-222ENST00000556768 GNG10P50151 68 aa5.86□□□□□ -1.47
SCFD1-222ENST00000556768 RPS11P62280 158 aaKnown RBP eCLIP5.86□□□□□ -1.47
SCFD1-222ENST00000556768 CD83Q01151 205 aa5.86□□□□□ -1.47
SCFD1-222ENST00000556768 GABPB1Q06547 395 aaPredicted RBP5.86□□□□□ -1.47
SCFD1-222ENST00000556768 SPHARQ15513 63 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms