RNA–Protein interactions for RNA: ENST00000556689.5

SHMT2-223, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 768 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-223ENST00000556689 CFHR3Q02985 330 aa9.87□□□□□ -0.83
SHMT2-223ENST00000556689 ZNF85Q03923 595 aa9.87□□□□□ -0.83
SHMT2-223ENST00000556689 ST3GAL4Q11206 333 aa9.87□□□□□ -0.83
SHMT2-223ENST00000556689 ZNF429Q86V71 674 aa9.87□□□□□ -0.83
SHMT2-223ENST00000556689 IZUMO1Q8IYV9 350 aa9.87□□□□□ -0.83
SHMT2-223ENST00000556689 OR1N2Q8NGR9 330 aa9.87□□□□□ -0.83
SHMT2-223ENST00000556689 OR13C3Q8NGS6 347 aa9.87□□□□□ -0.83
SHMT2-223ENST00000556689 OR13C9Q8NGT0 318 aa9.87□□□□□ -0.83
SHMT2-223ENST00000556689 FCGR1BQ92637 280 aa9.87□□□□□ -0.83
SHMT2-223ENST00000556689 S1PR3Q99500 378 aa9.87□□□□□ -0.83
SHMT2-223ENST00000556689 ZCCHC4Q9H5U6 513 aa9.87□□□□□ -0.83
SHMT2-223ENST00000556689 AMBNQ9NP70 447 aa9.87□□□□□ -0.83
SHMT2-223ENST00000556689 DIMT1Q9UNQ2 313 aaKnown RBP9.87□□□□□ -0.83
SHMT2-223ENST00000556689 CDK1P06493 297 aa9.86□□□□□ -0.83
SHMT2-223ENST00000556689 HCKP08631 526 aa9.86□□□□□ -0.83
SHMT2-223ENST00000556689 RPSAP08865 295 aaKnown RBP9.86□□□□□ -0.83
SHMT2-223ENST00000556689 CD1BP29016 333 aa9.86□□□□□ -0.83
SHMT2-223ENST00000556689 SSTR5P35346 364 aa9.86□□□□□ -0.83
SHMT2-223ENST00000556689 SOX6P35712 828 aa9.86□□□□□ -0.83
SHMT2-223ENST00000556689 KCNJ3P48549 501 aa9.86□□□□□ -0.83
SHMT2-223ENST00000556689 ZP1P60852 638 aa9.86□□□□□ -0.83
SHMT2-223ENST00000556689 PAX5Q02548 391 aa9.86□□□□□ -0.83
SHMT2-223ENST00000556689 MRPL28Q13084 256 aaKnown RBP9.86□□□□□ -0.83
SHMT2-223ENST00000556689 KISS1Q15726 138 aa9.86□□□□□ -0.83
SHMT2-223ENST00000556689 RSBN1Q5VWQ0 802 aaPredicted RBP9.86□□□□□ -0.83
SHMT2-223ENST00000556689 ZFAND6Q6FIF0 208 aa9.86□□□□□ -0.83
SHMT2-223ENST00000556689 ELP2Q6IA86 826 aa9.86□□□□□ -0.83
SHMT2-223ENST00000556689 FDX2Q6P4F2 183 aa9.86□□□□□ -0.83
SHMT2-223ENST00000556689 TMEM65Q6PI78 240 aa9.86□□□□□ -0.83
SHMT2-223ENST00000556689 ZNF773Q6PK81 442 aa9.86□□□□□ -0.83
SHMT2-223ENST00000556689 PRSS48Q7RTY5 328 aa9.86□□□□□ -0.83
SHMT2-223ENST00000556689 TSPAN14Q8NG11 270 aa9.86□□□□□ -0.83
SHMT2-223ENST00000556689 OR8H1Q8NGG4 311 aa9.86□□□□□ -0.83
SHMT2-223ENST00000556689 OR52I1Q8NGK6 324 aa9.86□□□□□ -0.83
SHMT2-223ENST00000556689 LGALS12Q96DT0 336 aa9.86□□□□□ -0.83
SHMT2-223ENST00000556689 KCTD7Q96MP8 289 aa9.86□□□□□ -0.83
SHMT2-223ENST00000556689 CITED4Q96RK1 184 aa9.86□□□□□ -0.83
SHMT2-223ENST00000556689 FGF20Q9NP95 211 aaPredicted RBP9.86□□□□□ -0.83
SHMT2-223ENST00000556689 MRPS18AQ9NVS2 196 aaKnown RBP9.86□□□□□ -0.83
SHMT2-223ENST00000556689 AASSQ9UDR5 926 aa9.86□□□□□ -0.83
SHMT2-223ENST00000556689 DNAH1Q9P2D7 4330 aa9.86□□□□□ -0.83
SHMT2-223ENST00000556689 STAB2Q8WWQ8 2551 aa9.85□□□□□ -0.83
SHMT2-223ENST00000556689 TRAV39A0A0B4J263 110 aa9.85□□□□□ -0.83
SHMT2-223ENST00000556689 IGF1P05019 195 aa9.85□□□□□ -0.83
SHMT2-223ENST00000556689 FRMD6-AS1P0C7T7 363 aa9.85□□□□□ -0.83
SHMT2-223ENST00000556689 OR5H8P0DN80 308 aa9.85□□□□□ -0.83
SHMT2-223ENST00000556689 CCR9P51686 369 aa9.85□□□□□ -0.83
SHMT2-223ENST00000556689 F2RL1P55085 397 aa9.85□□□□□ -0.83
SHMT2-223ENST00000556689 NANOS3P60323 173 aaKnown RBP9.85□□□□□ -0.83
SHMT2-223ENST00000556689 ZNF616Q08AN1 781 aa9.85□□□□□ -0.83
SHMT2-223ENST00000556689 TBCEQ15813 527 aaPredicted RBP9.85□□□□□ -0.83
SHMT2-223ENST00000556689 SERPINA12Q8IW75 414 aa9.85□□□□□ -0.83
SHMT2-223ENST00000556689 LINC00311Q8N616 119 aa9.85□□□□□ -0.83
SHMT2-223ENST00000556689 TMEM104Q8NE00 496 aa9.85□□□□□ -0.83
SHMT2-223ENST00000556689 OR51A4Q8NGJ6 313 aa9.85□□□□□ -0.83
SHMT2-223ENST00000556689 OR5D14Q8NGL3 314 aa9.85□□□□□ -0.83
SHMT2-223ENST00000556689 OR10AC1Q8NH08 325 aa9.85□□□□□ -0.83
SHMT2-223ENST00000556689 RTN4IP1Q8WWV3 396 aaPredicted RBP9.85□□□□□ -0.83
SHMT2-223ENST00000556689 GGHQ92820 318 aa9.85□□□□□ -0.83
SHMT2-223ENST00000556689 UBE2E2Q96LR5 201 aa9.85□□□□□ -0.83
SHMT2-223ENST00000556689 HSPB9Q9BQS6 159 aa9.85□□□□□ -0.83
SHMT2-223ENST00000556689 CHCHD6Q9BRQ6 235 aa9.85□□□□□ -0.83
SHMT2-223ENST00000556689 ALG8Q9BVK2 526 aa9.85□□□□□ -0.83
SHMT2-223ENST00000556689 JAM3Q9BX67 310 aa9.85□□□□□ -0.83
SHMT2-223ENST00000556689 MRPS26Q9BYN8 205 aaKnown RBP9.85□□□□□ -0.83
SHMT2-223ENST00000556689 VSIG4Q9Y279 399 aa9.85□□□□□ -0.83
SHMT2-223ENST00000556689 EXOGQ9Y2C4 368 aaKnown RBP9.85□□□□□ -0.83
SHMT2-223ENST00000556689 LYSTQ99698 3801 aa9.84□□□□□ -0.83
SHMT2-223ENST00000556689 I3L521 148 aa9.84□□□□□ -0.83
SHMT2-223ENST00000556689 HTR1AP08908 422 aa9.84□□□□□ -0.83
SHMT2-223ENST00000556689 IL3RAP26951 378 aa9.84□□□□□ -0.83
SHMT2-223ENST00000556689 TAS2R43P59537 309 aa9.84□□□□□ -0.83
SHMT2-223ENST00000556689 RUNX1Q01196 453 aa9.84□□□□□ -0.83
SHMT2-223ENST00000556689 KIAA0141Q14154 515 aaPredicted RBP9.84□□□□□ -0.83
SHMT2-223ENST00000556689 IL13RA2Q14627 380 aa9.84□□□□□ -0.83
SHMT2-223ENST00000556689 ASPHD1Q5U4P2 390 aa9.84□□□□□ -0.83
SHMT2-223ENST00000556689 FAM71E2Q8N5Q1 922 aa9.84□□□□□ -0.83
SHMT2-223ENST00000556689 ZNF491Q8N8L2 437 aa9.84□□□□□ -0.83
SHMT2-223ENST00000556689 C8orf31Q8N9H6 132 aa9.84□□□□□ -0.83
SHMT2-223ENST00000556689 PXT1Q8NFP0 134 aa9.84□□□□□ -0.83
SHMT2-223ENST00000556689 OR52M1Q8NGK5 317 aa9.84□□□□□ -0.83
SHMT2-223ENST00000556689 PLPPR1Q8TBJ4 325 aa9.84□□□□□ -0.83
SHMT2-223ENST00000556689 MYOZ3Q8TDC0 251 aa9.84□□□□□ -0.83
SHMT2-223ENST00000556689 DCUN1D4Q92564 292 aa9.84□□□□□ -0.83
SHMT2-223ENST00000556689 ST6GALNAC6Q969X2 333 aa9.84□□□□□ -0.83
SHMT2-223ENST00000556689 KLK15Q9H2R5 256 aa9.84□□□□□ -0.83
SHMT2-223ENST00000556689 DUSP21Q9H596 190 aa9.84□□□□□ -0.83
SHMT2-223ENST00000556689 GNB4Q9HAV0 340 aa9.84□□□□□ -0.83
SHMT2-223ENST00000556689 FKBP14Q9NWM8 211 aa9.84□□□□□ -0.83
SHMT2-223ENST00000556689 ZNF580Q9UK33 172 aa9.84□□□□□ -0.83
SHMT2-223ENST00000556689 OR4C45A6NMZ5 311 aa9.83□□□□□ -0.84
SHMT2-223ENST00000556689 ZNF736B4DX44 427 aaPredicted RBP9.83□□□□□ -0.84
SHMT2-223ENST00000556689 SDCBPO00560 298 aaPredicted RBP9.83□□□□□ -0.84
SHMT2-223ENST00000556689 OVOL1O14753 267 aa9.83□□□□□ -0.84
SHMT2-223ENST00000556689 SULT1B1O43704 296 aa9.83□□□□□ -0.84
SHMT2-223ENST00000556689 GP9P14770 177 aa9.83□□□□□ -0.84
SHMT2-223ENST00000556689 SPNP16150 400 aa9.83□□□□□ -0.84
SHMT2-223ENST00000556689 WNT4P56705 351 aa9.83□□□□□ -0.84
SHMT2-223ENST00000556689 ALKBH1Q13686 389 aaKnown RBP9.83□□□□□ -0.84
SHMT2-223ENST00000556689 GALEQ14376 348 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms