RNA–Protein interactions for RNA: ENST00000556607.1

SPTLC2-205, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 3

Gene SPTLC2, Length 460 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-205ENST00000556607 DOC2BQ14184 412 aa8.38□□□□□ -1.07
SPTLC2-205ENST00000556607 C6orf183Q5T699 404 aa8.38□□□□□ -1.07
SPTLC2-205ENST00000556607 FAM53AQ6NSI3 398 aaPredicted RBP8.38□□□□□ -1.07
SPTLC2-205ENST00000556607 ZNF497Q6ZNH5 498 aa8.38□□□□□ -1.07
SPTLC2-205ENST00000556607 KLHL30-AS1Q8NEE0 82 aa8.38□□□□□ -1.07
SPTLC2-205ENST00000556607 OR52M1Q8NGK5 317 aa8.38□□□□□ -1.07
SPTLC2-205ENST00000556607 OR2T10Q8NGZ9 312 aa8.38□□□□□ -1.07
SPTLC2-205ENST00000556607 DPF1Q92782 380 aa8.38□□□□□ -1.07
SPTLC2-205ENST00000556607 RCC1LQ96I51 464 aaKnown RBP8.38□□□□□ -1.07
SPTLC2-205ENST00000556607 PGLYRP3Q96LB9 341 aa8.38□□□□□ -1.07
SPTLC2-205ENST00000556607 RASL11BQ9BPW5 248 aa8.38□□□□□ -1.07
SPTLC2-205ENST00000556607 VCXQ9H320 206 aa8.38□□□□□ -1.07
SPTLC2-205ENST00000556607 GFOD1Q9NXC2 390 aa8.38□□□□□ -1.07
SPTLC2-205ENST00000556607 KCNIP1Q9NZI2 227 aa8.38□□□□□ -1.07
SPTLC2-205ENST00000556607 CNOT2Q9NZN8 540 aaKnown RBP8.38□□□□□ -1.07
SPTLC2-205ENST00000556607 ERGIC3Q9Y282 383 aa8.38□□□□□ -1.07
SPTLC2-205ENST00000556607 GPX5O75715 221 aa8.37□□□□□ -1.07
SPTLC2-205ENST00000556607 DUS4LO95620 317 aaKnown RBP8.37□□□□□ -1.07
SPTLC2-205ENST00000556607 GNAO1P09471 354 aa8.37□□□□□ -1.07
SPTLC2-205ENST00000556607 MGMTP16455 207 aa8.37□□□□□ -1.07
SPTLC2-205ENST00000556607 VHLP40337 213 aa8.37□□□□□ -1.07
SPTLC2-205ENST00000556607 RAB25P57735 213 aa8.37□□□□□ -1.07
SPTLC2-205ENST00000556607 C8orf86Q6ZUL3 223 aa8.37□□□□□ -1.07
SPTLC2-205ENST00000556607 TGIF2LXQ8IUE1 241 aa8.37□□□□□ -1.07
SPTLC2-205ENST00000556607 STPG2Q8N412 459 aa8.37□□□□□ -1.07
SPTLC2-205ENST00000556607 NKAIN3Q8N8D7 197 aa8.37□□□□□ -1.07
SPTLC2-205ENST00000556607 WFDC9Q8NEX5 89 aa8.37□□□□□ -1.07
SPTLC2-205ENST00000556607 OR1L1Q8NH94 360 aa8.37□□□□□ -1.07
SPTLC2-205ENST00000556607 RTN4IP1Q8WWV3 396 aaPredicted RBP8.37□□□□□ -1.07
SPTLC2-205ENST00000556607 THRSPQ92748 146 aa8.37□□□□□ -1.07
SPTLC2-205ENST00000556607 TFAP2CQ92754 450 aa8.37□□□□□ -1.07
SPTLC2-205ENST00000556607 FAM46BQ96A09 425 aa8.37□□□□□ -1.07
SPTLC2-205ENST00000556607 MRPS24Q96EL2 167 aaKnown RBP8.37□□□□□ -1.07
SPTLC2-205ENST00000556607 EAF1Q96JC9 268 aaPredicted RBP8.37□□□□□ -1.07
SPTLC2-205ENST00000556607 DERL3Q96Q80 235 aa8.37□□□□□ -1.07
SPTLC2-205ENST00000556607 PSORS1C1Q9UIG5 152 aa8.37□□□□□ -1.07
SPTLC2-205ENST00000556607 TRBV5-7A0A0A0MS05 114 aa8.36□□□□□ -1.07
SPTLC2-205ENST00000556607 LINC01548A6NM66 108 aa8.36□□□□□ -1.07
SPTLC2-205ENST00000556607 C12orf77C9JDV5 145 aa8.36□□□□□ -1.07
SPTLC2-205ENST00000556607 PTGES3LE9PB15 166 aa8.36□□□□□ -1.07
SPTLC2-205ENST00000556607 SLC31A2O15432 143 aa8.36□□□□□ -1.07
SPTLC2-205ENST00000556607 MOSP00540 346 aa8.36□□□□□ -1.07
SPTLC2-205ENST00000556607 HBZP02008 142 aa8.36□□□□□ -1.07
SPTLC2-205ENST00000556607 RCC1P18754 421 aaPredicted RBP8.36□□□□□ -1.07
SPTLC2-205ENST00000556607 FUT3P21217 361 aa8.36□□□□□ -1.07
SPTLC2-205ENST00000556607 CD1BP29016 333 aa8.36□□□□□ -1.07
SPTLC2-205ENST00000556607 HOXD3P31249 432 aaPredicted RBP8.36□□□□□ -1.07
SPTLC2-205ENST00000556607 RPL23AP62750 156 aaKnown RBP8.36□□□□□ -1.07
SPTLC2-205ENST00000556607 GABPB1Q06547 395 aaPredicted RBP8.36□□□□□ -1.07
SPTLC2-205ENST00000556607 GPR50Q13585 617 aa8.36□□□□□ -1.07
SPTLC2-205ENST00000556607 NKAPLQ5M9Q1 402 aa8.36□□□□□ -1.07
SPTLC2-205ENST00000556607 TRAT1Q6PIZ9 186 aa8.36□□□□□ -1.07
SPTLC2-205ENST00000556607 LINC00311Q8N616 119 aa8.36□□□□□ -1.07
SPTLC2-205ENST00000556607 NANOGP1Q8N7R0 232 aa8.36□□□□□ -1.07
SPTLC2-205ENST00000556607 GON7Q9BXV9 100 aa8.36□□□□□ -1.07
SPTLC2-205ENST00000556607 CST11Q9H112 138 aa8.36□□□□□ -1.07
SPTLC2-205ENST00000556607 OR2S2Q9NQN1 319 aa8.36□□□□□ -1.07
SPTLC2-205ENST00000556607 ZFP57Q9NU63 452 aa8.36□□□□□ -1.07
SPTLC2-205ENST00000556607 LIN7CQ9NUP9 197 aaKnown RBP8.36□□□□□ -1.07
SPTLC2-205ENST00000556607 FAM90A10PA6NDY2 464 aa8.35□□□□□ -1.07
SPTLC2-205ENST00000556607 FAM90A7PA6NKC0 464 aa8.35□□□□□ -1.07
SPTLC2-205ENST00000556607 FAM90A23PA8MXZ1 464 aa8.35□□□□□ -1.07
SPTLC2-205ENST00000556607 AP4M1O00189 453 aa8.35□□□□□ -1.07
SPTLC2-205ENST00000556607 TXNL1O43396 289 aa8.35□□□□□ -1.07
SPTLC2-205ENST00000556607 RRP9O43818 475 aaKnown RBP8.35□□□□□ -1.07
SPTLC2-205ENST00000556607 IGHG2P01859 326 aa8.35□□□□□ -1.07
SPTLC2-205ENST00000556607 THBS3P49746 956 aa8.35□□□□□ -1.07
SPTLC2-205ENST00000556607 EBI3Q14213 229 aa8.35□□□□□ -1.07
SPTLC2-205ENST00000556607 MED22Q15528 200 aa8.35□□□□□ -1.07
SPTLC2-205ENST00000556607 RBM48Q5RL73 367 aaKnown RBP8.35□□□□□ -1.07
SPTLC2-205ENST00000556607 GLT8D1Q68CQ7 371 aa8.35□□□□□ -1.07
SPTLC2-205ENST00000556607 TEX38Q6PEX7 206 aa8.35□□□□□ -1.07
SPTLC2-205ENST00000556607 SLC25A48Q6ZT89 311 aaKnown RBP8.35□□□□□ -1.07
SPTLC2-205ENST00000556607 C18orf65Q6ZTR6 163 aa8.35□□□□□ -1.07
SPTLC2-205ENST00000556607 OR2W3Q7Z3T1 314 aa8.35□□□□□ -1.07
SPTLC2-205ENST00000556607 CDH26Q8IXH8 852 aa8.35□□□□□ -1.07
SPTLC2-205ENST00000556607 MRPL41Q8IXM3 137 aaKnown RBP8.35□□□□□ -1.07
SPTLC2-205ENST00000556607 IZUMO1Q8IYV9 350 aa8.35□□□□□ -1.07
SPTLC2-205ENST00000556607 COMMD1Q8N668 190 aa8.35□□□□□ -1.07
SPTLC2-205ENST00000556607 C8orf31Q8N9H6 132 aa8.35□□□□□ -1.07
SPTLC2-205ENST00000556607 Q8N9W7 124 aa8.35□□□□□ -1.07
SPTLC2-205ENST00000556607 ZNF485Q8NCK3 441 aa8.35□□□□□ -1.07
SPTLC2-205ENST00000556607 TMEM104Q8NE00 496 aa8.35□□□□□ -1.07
SPTLC2-205ENST00000556607 RBMXL1Q96E39 390 aaKnown RBP8.35□□□□□ -1.07
SPTLC2-205ENST00000556607 Q96M66 194 aa8.35□□□□□ -1.07
SPTLC2-205ENST00000556607 DUX3Q96PT4 197 aa8.35□□□□□ -1.07
SPTLC2-205ENST00000556607 NEDD4LQ96PU5 975 aa8.35□□□□□ -1.07
SPTLC2-205ENST00000556607 TMED9Q9BVK6 235 aa8.35□□□□□ -1.07
SPTLC2-205ENST00000556607 MND1Q9BWT6 205 aa8.35□□□□□ -1.07
SPTLC2-205ENST00000556607 GPR61Q9BZJ8 451 aa8.35□□□□□ -1.07
SPTLC2-205ENST00000556607 ABCG5Q9H222 651 aa8.35□□□□□ -1.07
SPTLC2-205ENST00000556607 TAF9BQ9HBM6 251 aa8.35□□□□□ -1.07
SPTLC2-205ENST00000556607 CHMP1AQ9HD42 196 aaPredicted RBP8.35□□□□□ -1.07
SPTLC2-205ENST00000556607 RCC2Q9P258 522 aaKnown RBP8.35□□□□□ -1.07
SPTLC2-205ENST00000556607 ZNF736B4DX44 427 aaPredicted RBP8.34□□□□□ -1.07
SPTLC2-205ENST00000556607 ANKRD65E5RJM6 399 aa8.34□□□□□ -1.07
SPTLC2-205ENST00000556607 PDCD6O75340 191 aa8.34□□□□□ -1.07
SPTLC2-205ENST00000556607 CA11O75493 328 aa8.34□□□□□ -1.07
SPTLC2-205ENST00000556607 CD1AP06126 327 aa8.34□□□□□ -1.07
SPTLC2-205ENST00000556607 SLC2A2P11168 524 aaPredicted RBP8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms