RNA–Protein interactions for RNA: ENST00000556536.5

TUBB3-211, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 925 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-211ENST00000556536 KCNIP1Q9NZI2 227 aa14.26□□□□□ -0.13
TUBB3-211ENST00000556536 KCNS2Q9ULS6 477 aa14.26□□□□□ -0.13
TUBB3-211ENST00000556536 YLPM1P49750 1951 aaKnown RBP14.25□□□□□ -0.13
TUBB3-211ENST00000556536 POM121CA8CG34 1229 aa14.25□□□□□ -0.13
TUBB3-211ENST00000556536 TRDCB7Z8K6 153 aa14.25□□□□□ -0.13
TUBB3-211ENST00000556536 SCTP09683 121 aa14.25□□□□□ -0.13
TUBB3-211ENST00000556536 IGHV1-8P0DP01 117 aa14.25□□□□□ -0.13
TUBB3-211ENST00000556536 HLA-DRB3P79483 266 aa14.25□□□□□ -0.13
TUBB3-211ENST00000556536 FAM53AQ6NSI3 398 aaPredicted RBP14.25□□□□□ -0.13
TUBB3-211ENST00000556536 TRAT1Q6PIZ9 186 aa14.25□□□□□ -0.13
TUBB3-211ENST00000556536 HEPN1Q6WQI6 88 aa14.25□□□□□ -0.13
TUBB3-211ENST00000556536 C1orf122Q6ZSJ8 110 aa14.25□□□□□ -0.13
TUBB3-211ENST00000556536 OR52I2Q8NH67 350 aa14.25□□□□□ -0.13
TUBB3-211ENST00000556536 KIRREL1Q96J84 757 aa14.25□□□□□ -0.13
TUBB3-211ENST00000556536 METTL8Q9H825 291 aaKnown RBP14.25□□□□□ -0.13
TUBB3-211ENST00000556536 SCPEP1Q9HB40 452 aa14.25□□□□□ -0.13
TUBB3-211ENST00000556536 IDI2-AS1Q9NZ38 188 aa14.25□□□□□ -0.13
TUBB3-211ENST00000556536 FN1P02751 2386 aaKnown RBP14.25□□□□□ -0.13
TUBB3-211ENST00000556536 JMJD1CQ15652 2540 aa14.24□□□□□ -0.13
TUBB3-211ENST00000556536 FBN1P35555 2871 aaKnown RBP14.24□□□□□ -0.13
TUBB3-211ENST00000556536 CSPG4Q6UVK1 2322 aa14.24□□□□□ -0.13
TUBB3-211ENST00000556536 SPINT2O43291 252 aa14.24□□□□□ -0.13
TUBB3-211ENST00000556536 RBP4P02753 201 aa14.24□□□□□ -0.13
TUBB3-211ENST00000556536 LPLP06858 475 aa14.24□□□□□ -0.13
TUBB3-211ENST00000556536 GSTT2P0CG29 244 aa14.24□□□□□ -0.13
TUBB3-211ENST00000556536 GSTT2BP0CG30 244 aa14.24□□□□□ -0.13
TUBB3-211ENST00000556536 PRTN3P24158 256 aa14.24□□□□□ -0.13
TUBB3-211ENST00000556536 ETV6P41212 452 aa14.24□□□□□ -0.13
TUBB3-211ENST00000556536 DGCR2P98153 550 aa14.24□□□□□ -0.13
TUBB3-211ENST00000556536 ZNF79Q15937 498 aa14.24□□□□□ -0.13
TUBB3-211ENST00000556536 SRSF7Q16629 238 aaKnown RBP eCLIP14.24□□□□□ -0.13
TUBB3-211ENST00000556536 SPANXN2Q5MJ10 180 aa14.24□□□□□ -0.13
TUBB3-211ENST00000556536 ZNF554Q86TJ5 538 aa14.24□□□□□ -0.13
TUBB3-211ENST00000556536 HOGA1Q86XE5 327 aa14.24□□□□□ -0.13
TUBB3-211ENST00000556536 C15orf40Q8WUR7 153 aa14.24□□□□□ -0.13
TUBB3-211ENST00000556536 TNFRSF14Q92956 283 aa14.24□□□□□ -0.13
TUBB3-211ENST00000556536 ANAPC10Q9UM13 185 aa14.24□□□□□ -0.13
TUBB3-211ENST00000556536 SESN1Q9Y6P5 492 aa14.24□□□□□ -0.13
TUBB3-211ENST00000556536 IGKV1-6A0A0C4DH72 117 aa14.23□□□□□ -0.13
TUBB3-211ENST00000556536 hCG_1809904A0A1W2PP81 198 aa14.23□□□□□ -0.13
TUBB3-211ENST00000556536 A0A1W2PPE2 198 aa14.23□□□□□ -0.13
TUBB3-211ENST00000556536 A0A1W2PR64 198 aa14.23□□□□□ -0.13
TUBB3-211ENST00000556536 A0A1W2PRV1 198 aa14.23□□□□□ -0.13
TUBB3-211ENST00000556536 FAM172BPA6NC97 362 aa14.23□□□□□ -0.13
TUBB3-211ENST00000556536 A8MV72 311 aaPredicted RBP14.23□□□□□ -0.13
TUBB3-211ENST00000556536 F2RL2O00254 374 aa14.23□□□□□ -0.13
TUBB3-211ENST00000556536 SULT1C2O00338 296 aa14.23□□□□□ -0.13
TUBB3-211ENST00000556536 CTDSPLO15194 276 aa14.23□□□□□ -0.13
TUBB3-211ENST00000556536 FABP7O15540 132 aa14.23□□□□□ -0.13
TUBB3-211ENST00000556536 FPR2P25090 351 aa14.23□□□□□ -0.13
TUBB3-211ENST00000556536 NFYBP25208 207 aa14.23□□□□□ -0.13
TUBB3-211ENST00000556536 CBX5P45973 191 aa14.23□□□□□ -0.13
TUBB3-211ENST00000556536 KLRD1Q13241 179 aa14.23□□□□□ -0.13
TUBB3-211ENST00000556536 HCP5Q6MZN7 132 aa14.23□□□□□ -0.13
TUBB3-211ENST00000556536 Q6ZS49 121 aa14.23□□□□□ -0.13
TUBB3-211ENST00000556536 MFSD4AQ8N468 514 aa14.23□□□□□ -0.13
TUBB3-211ENST00000556536 SNAPC3Q92966 411 aa14.23□□□□□ -0.13
TUBB3-211ENST00000556536 UPRTQ96BW1 309 aa14.23□□□□□ -0.13
TUBB3-211ENST00000556536 SUCNR1Q9BXA5 334 aa14.23□□□□□ -0.13
TUBB3-211ENST00000556536 UNKLQ9H9P5 680 aaKnown RBP14.23□□□□□ -0.13
TUBB3-211ENST00000556536 ZNF286AQ9HBT8 521 aa14.23□□□□□ -0.13
TUBB3-211ENST00000556536 IFT46Q9NQC8 304 aa14.23□□□□□ -0.13
TUBB3-211ENST00000556536 RABL2AQ9UBK7 228 aaPredicted RBP14.23□□□□□ -0.13
TUBB3-211ENST00000556536 MGAT4AQ9UM21 535 aa14.23□□□□□ -0.13
TUBB3-211ENST00000556536 RABL2BQ9UNT1 228 aa14.23□□□□□ -0.13
TUBB3-211ENST00000556536 SVEP1Q4LDE5 3571 aa14.23□□□□□ -0.13
TUBB3-211ENST00000556536 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.23□□□□□ -0.132e-8■■□□□ 12
TUBB3-211ENST00000556536 ABCA1O95477 2261 aa14.22□□□□□ -0.13
TUBB3-211ENST00000556536 IGHV3-43A0A0B4J1X8 118 aa14.22□□□□□ -0.13
TUBB3-211ENST00000556536 RNASEK-C17orf49H0YIS7 233 aa14.22□□□□□ -0.13
TUBB3-211ENST00000556536 GABARAPH6UMI1 98 aa14.22□□□□□ -0.13
TUBB3-211ENST00000556536 IGHV3-43DP0DP04 118 aa14.22□□□□□ -0.13
TUBB3-211ENST00000556536 COX7A1P24310 79 aa14.22□□□□□ -0.13
TUBB3-211ENST00000556536 LOXL3P58215 753 aa14.22□□□□□ -0.13
TUBB3-211ENST00000556536 GNMTQ14749 295 aa14.22□□□□□ -0.13
TUBB3-211ENST00000556536 HERPUD1Q15011 391 aa14.22□□□□□ -0.13
TUBB3-211ENST00000556536 PYDC2Q56P42 97 aa14.22□□□□□ -0.13
TUBB3-211ENST00000556536 OR52W1Q6IF63 320 aa14.22□□□□□ -0.13
TUBB3-211ENST00000556536 LINC00299Q6ZSB3 139 aa14.22□□□□□ -0.13
TUBB3-211ENST00000556536 PDZD9Q8IXQ8 264 aa14.22□□□□□ -0.13
TUBB3-211ENST00000556536 BEST4Q8NFU0 473 aa14.22□□□□□ -0.13
TUBB3-211ENST00000556536 OR52L2PQ8NGH6 319 aa14.22□□□□□ -0.13
TUBB3-211ENST00000556536 SMIM4Q8WVI0 70 aa14.22□□□□□ -0.13
TUBB3-211ENST00000556536 FCAMRQ8WWV6 532 aa14.22□□□□□ -0.13
TUBB3-211ENST00000556536 IL1F10Q8WWZ1 152 aa14.22□□□□□ -0.13
TUBB3-211ENST00000556536 LEAP2Q969E1 77 aa14.22□□□□□ -0.13
TUBB3-211ENST00000556536 LHX4Q969G2 390 aa14.22□□□□□ -0.13
TUBB3-211ENST00000556536 TMEM133Q9H2Q1 129 aa14.22□□□□□ -0.13
TUBB3-211ENST00000556536 AKIP1Q9NQ31 210 aa14.22□□□□□ -0.13
TUBB3-211ENST00000556536 KLK11Q9UBX7 282 aa14.22□□□□□ -0.13
TUBB3-211ENST00000556536 IGHV3OR16-10A0A075B7F0 116 aa14.21□□□□□ -0.13
TUBB3-211ENST00000556536 SDCBPO00560 298 aaPredicted RBP14.21□□□□□ -0.13
TUBB3-211ENST00000556536 IGHV3-7P01780 117 aa14.21□□□□□ -0.13
TUBB3-211ENST00000556536 NAT1P18440 290 aa14.21□□□□□ -0.13
TUBB3-211ENST00000556536 PTBP1P26599 531 aaKnown RBP eCLIP14.21□□□□□ -0.132e-42■■■■■ 46.6
TUBB3-211ENST00000556536 KIR2DS4P43632 304 aa14.21□□□□□ -0.13
TUBB3-211ENST00000556536 MRPS10P82664 201 aaKnown RBP14.21□□□□□ -0.13
TUBB3-211ENST00000556536 KIR2DS1Q14954 304 aa14.21□□□□□ -0.13
TUBB3-211ENST00000556536 IGSF11Q5DX21 431 aa14.21□□□□□ -0.13
TUBB3-211ENST00000556536 KLF17Q5JT82 389 aaPredicted RBP14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms