RNA–Protein interactions for RNA: ENST00000555935.1

CHD8-209, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 2,617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-209ENST00000555935 WDR61Q9GZS3 305 aaKnown RBP6.67□□□□□ -1.34
CHD8-209ENST00000555935 IGKV1D-13A0A0B4J2D9 117 aa6.66□□□□□ -1.34
CHD8-209ENST00000555935 TCRBV21S2A2A0A5A6 115 aa6.66□□□□□ -1.34
CHD8-209ENST00000555935 LNP1A1A4G5 178 aa6.66□□□□□ -1.34
CHD8-209ENST00000555935 ZNF705FA8MVS1 300 aaPredicted RBP6.66□□□□□ -1.34
CHD8-209ENST00000555935 SLC33A1O00400 549 aaPredicted RBP6.66□□□□□ -1.34
CHD8-209ENST00000555935 SYNGR2O43760 224 aa6.66□□□□□ -1.34
CHD8-209ENST00000555935 PGLYRP1O75594 196 aaPredicted RBP6.66□□□□□ -1.34
CHD8-209ENST00000555935 TNFSF13O75888 250 aa6.66□□□□□ -1.34
CHD8-209ENST00000555935 GYPAP02724 150 aa6.66□□□□□ -1.34
CHD8-209ENST00000555935 OPN1LWP04000 364 aa6.66□□□□□ -1.34
CHD8-209ENST00000555935 ZNF705DP0CH99 300 aaPredicted RBP6.66□□□□□ -1.34
CHD8-209ENST00000555935 ZNF705BP0CI00 300 aaPredicted RBP6.66□□□□□ -1.34
CHD8-209ENST00000555935 IGKV1-13P0DP09 117 aa6.66□□□□□ -1.34
CHD8-209ENST00000555935 RPL15P61313 204 aaKnown RBP6.66□□□□□ -1.34
CHD8-209ENST00000555935 FAM27BQ5VT28 67 aa6.66□□□□□ -1.34
CHD8-209ENST00000555935 TMEM92Q6UXU6 159 aa6.66□□□□□ -1.34
CHD8-209ENST00000555935 NFAM1Q8NET5 270 aaPredicted RBP6.66□□□□□ -1.34
CHD8-209ENST00000555935 OR2M3Q8NG83 312 aa6.66□□□□□ -1.34
CHD8-209ENST00000555935 HLA-CQ95604 372 aa6.66□□□□□ -1.34
CHD8-209ENST00000555935 LSM10Q969L4 123 aaKnown RBP6.66□□□□□ -1.34
CHD8-209ENST00000555935 TBX15Q96SF7 602 aa6.66□□□□□ -1.34
CHD8-209ENST00000555935 METTL7AQ9H8H3 244 aa6.66□□□□□ -1.34
CHD8-209ENST00000555935 PSENENQ9NZ42 101 aa6.66□□□□□ -1.34
CHD8-209ENST00000555935 SEMA5BQ9P283 1151 aa6.66□□□□□ -1.34
CHD8-209ENST00000555935 ATG2BQ96BY7 2078 aa6.66□□□□□ -1.34
CHD8-209ENST00000555935 LRP5LA4QPB2 252 aa6.66□□□□□ -1.34
CHD8-209ENST00000555935 CCDC85CA6NKD9 419 aa6.66□□□□□ -1.34
CHD8-209ENST00000555935 NAPSAO96009 420 aa6.66□□□□□ -1.34
CHD8-209ENST00000555935 SERPINE2P07093 398 aa6.66□□□□□ -1.34
CHD8-209ENST00000555935 GABRG2P18507 467 aa6.66□□□□□ -1.34
CHD8-209ENST00000555935 PTGDSP41222 190 aa6.66□□□□□ -1.34
CHD8-209ENST00000555935 CLDN15P56746 228 aa6.66□□□□□ -1.34
CHD8-209ENST00000555935 RHBDD2Q6NTF9 364 aa6.66□□□□□ -1.34
CHD8-209ENST00000555935 Q8NFD4 153 aa6.66□□□□□ -1.34
CHD8-209ENST00000555935 OR2AE1Q8NHA4 323 aa6.66□□□□□ -1.34
CHD8-209ENST00000555935 TAF15Q92804 592 aaKnown RBP eCLIP6.66□□□□□ -1.34
CHD8-209ENST00000555935 PCED1AQ9H1Q7 454 aa6.66□□□□□ -1.34
CHD8-209ENST00000555935 OPN3Q9H1Y3 402 aaPredicted RBP6.66□□□□□ -1.34
CHD8-209ENST00000555935 CCL28Q9NRJ3 127 aa6.66□□□□□ -1.34
CHD8-209ENST00000555935 PXMP4Q9Y6I8 212 aa6.66□□□□□ -1.34
CHD8-209ENST00000555935 IGHV3-20A0A0C4DH32 117 aa6.65□□□□□ -1.34
CHD8-209ENST00000555935 A0A0G2JRQ6 117 aa6.65□□□□□ -1.34
CHD8-209ENST00000555935 CTXND1A0A1B0GTU2 59 aa6.65□□□□□ -1.34
CHD8-209ENST00000555935 VAMP5O95183 116 aa6.65□□□□□ -1.34
CHD8-209ENST00000555935 BRS3P32247 399 aa6.65□□□□□ -1.34
CHD8-209ENST00000555935 TNFSF10P50591 281 aa6.65□□□□□ -1.34
CHD8-209ENST00000555935 PPP1CBP62140 327 aa6.65□□□□□ -1.34
CHD8-209ENST00000555935 PAFAH1B2P68402 229 aa6.65□□□□□ -1.34
CHD8-209ENST00000555935 RTP5Q14D33 572 aa6.65□□□□□ -1.34
CHD8-209ENST00000555935 C21orf62-AS1Q17RA5 79 aa6.65□□□□□ -1.34
CHD8-209ENST00000555935 TMEM183BQ1AE95 376 aa6.65□□□□□ -1.34
CHD8-209ENST00000555935 ARSJQ5FYB0 599 aaPredicted RBP6.65□□□□□ -1.34
CHD8-209ENST00000555935 PHYHD1Q5SRE7 291 aa6.65□□□□□ -1.34
CHD8-209ENST00000555935 TEX43Q6ZNM6 134 aa6.65□□□□□ -1.34
CHD8-209ENST00000555935 C17orf82Q86X59 251 aaPredicted RBP6.65□□□□□ -1.34
CHD8-209ENST00000555935 PRR18Q8N4B5 295 aa6.65□□□□□ -1.34
CHD8-209ENST00000555935 THAP3Q8WTV1 239 aaPredicted RBP6.65□□□□□ -1.34
CHD8-209ENST00000555935 NEIL1Q96FI4 390 aaPredicted RBP6.65□□□□□ -1.34
CHD8-209ENST00000555935 WDYHV1Q96HA8 205 aa6.65□□□□□ -1.34
CHD8-209ENST00000555935 RBM24Q9BX46 236 aaKnown RBP6.65□□□□□ -1.34
CHD8-209ENST00000555935 STRADBQ9C0K7 418 aa6.65□□□□□ -1.34
CHD8-209ENST00000555935 LPAR2Q9HBW0 351 aa6.65□□□□□ -1.34
CHD8-209ENST00000555935 GPR35Q9HC97 309 aa6.65□□□□□ -1.34
CHD8-209ENST00000555935 TMEM106BQ9NUM4 274 aa6.65□□□□□ -1.34
CHD8-209ENST00000555935 TRAPPC1Q9Y5R8 145 aa6.65□□□□□ -1.34
CHD8-209ENST00000555935 ATG2AQ2TAZ0 1938 aa6.65□□□□□ -1.34
CHD8-209ENST00000555935 SYNGR3O43761 229 aa6.65□□□□□ -1.34
CHD8-209ENST00000555935 PDGFBP01127 241 aaPredicted RBP6.65□□□□□ -1.34
CHD8-209ENST00000555935 LCATP04180 440 aa6.65□□□□□ -1.34
CHD8-209ENST00000555935 SCTP09683 121 aa6.65□□□□□ -1.34
CHD8-209ENST00000555935 IRF2P14316 349 aa6.65□□□□□ -1.34
CHD8-209ENST00000555935 IL3RAP26951 378 aa6.65□□□□□ -1.34
CHD8-209ENST00000555935 ARL16Q0P5N6 197 aa6.65□□□□□ -1.34
CHD8-209ENST00000555935 TMEM144Q7Z5S9 345 aa6.65□□□□□ -1.34
CHD8-209ENST00000555935 HAPLN4Q86UW8 402 aa6.65□□□□□ -1.34
CHD8-209ENST00000555935 RPP25LQ8N5L8 163 aaKnown RBP6.65□□□□□ -1.34
CHD8-209ENST00000555935 OR4F5Q8NH21 305 aa6.65□□□□□ -1.34
CHD8-209ENST00000555935 OR1F12Q8NHA8 337 aa6.65□□□□□ -1.34
CHD8-209ENST00000555935 OR4F4Q96R69 305 aa6.65□□□□□ -1.34
CHD8-209ENST00000555935 ULBP2Q9BZM5 246 aa6.65□□□□□ -1.34
CHD8-209ENST00000555935 PARD6AQ9NPB6 346 aa6.65□□□□□ -1.34
CHD8-209ENST00000555935 SHANK1Q9Y566 2161 aa6.65□□□□□ -1.35
CHD8-209ENST00000555935 TRBV11-1A0A0K0K1C0 115 aa6.64□□□□□ -1.35
CHD8-209ENST00000555935 ZNF816-ZNF321PA0A0X1KG74 233 aa6.64□□□□□ -1.35
CHD8-209ENST00000555935 A6NNC1 897 aa6.64□□□□□ -1.35
CHD8-209ENST00000555935 CD300LBA8K4G0 201 aa6.64□□□□□ -1.35
CHD8-209ENST00000555935 NPIPA2E9PIF3 369 aa6.64□□□□□ -1.35
CHD8-209ENST00000555935 NPIPA3F8WFD2 350 aa6.64□□□□□ -1.35
CHD8-209ENST00000555935 YPEL1O60688 119 aa6.64□□□□□ -1.35
CHD8-209ENST00000555935 IL6RP08887 468 aaPredicted RBP6.64□□□□□ -1.35
CHD8-209ENST00000555935 TPPP2P59282 170 aa6.64□□□□□ -1.35
CHD8-209ENST00000555935 FOXL1Q12952 345 aa6.64□□□□□ -1.35
CHD8-209ENST00000555935 DAZAP2Q15038 168 aaPredicted RBP6.64□□□□□ -1.35
CHD8-209ENST00000555935 PDCD1Q15116 288 aa6.64□□□□□ -1.35
CHD8-209ENST00000555935 CLEC12BQ2HXU8 276 aa6.64□□□□□ -1.35
CHD8-209ENST00000555935 TMEM240Q5SV17 173 aa6.64□□□□□ -1.35
CHD8-209ENST00000555935 COL5A1-AS1Q5SY13 56 aa6.64□□□□□ -1.35
CHD8-209ENST00000555935 PLCXD3Q63HM9 321 aa6.64□□□□□ -1.35
CHD8-209ENST00000555935 PNPLA5Q7Z6Z6 429 aaPredicted RBP6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms