RNA–Protein interactions for RNA: ENST00000555497.5

TMEM260-207, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,218 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-207ENST00000555497 H0Y980 276 aa20.47■□□□□ 0.87
TMEM260-207ENST00000555497 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP20.47■□□□□ 0.87
TMEM260-207ENST00000555497 JTBO76095 146 aa20.47■□□□□ 0.87
TMEM260-207ENST00000555497 F2RP25116 425 aa20.47■□□□□ 0.87
TMEM260-207ENST00000555497 MSMPQ1L6U9 139 aa20.47■□□□□ 0.87
TMEM260-207ENST00000555497 CXorf66Q5JRM2 361 aaPredicted RBP20.47■□□□□ 0.87
TMEM260-207ENST00000555497 BEND4Q6ZU67 534 aa20.47■□□□□ 0.87
TMEM260-207ENST00000555497 MOB1BQ7L9L4 216 aa20.47■□□□□ 0.87
TMEM260-207ENST00000555497 OR10V1Q8NGI7 309 aa20.47■□□□□ 0.87
TMEM260-207ENST00000555497 ZFP57Q9NU63 452 aa20.47■□□□□ 0.87
TMEM260-207ENST00000555497 UFSP2Q9NUQ7 469 aa20.47■□□□□ 0.87
TMEM260-207ENST00000555497 WIPI2Q9Y4P8 454 aa20.47■□□□□ 0.87
TMEM260-207ENST00000555497 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP20.47■□□□□ 0.87
TMEM260-207ENST00000555497 APOC3P02656 99 aa20.47■□□□□ 0.87
TMEM260-207ENST00000555497 LPAR6P43657 344 aa20.47■□□□□ 0.87
TMEM260-207ENST00000555497 ARHGDIBP52566 201 aa20.47■□□□□ 0.87
TMEM260-207ENST00000555497 POLR2GP62487 172 aaKnown RBP eCLIP20.47■□□□□ 0.87
TMEM260-207ENST00000555497 ZNF718Q3SXZ3 478 aa20.47■□□□□ 0.87
TMEM260-207ENST00000555497 GPR157Q5UAW9 335 aa20.47■□□□□ 0.87
TMEM260-207ENST00000555497 OR5D13Q8NGL4 314 aa20.47■□□□□ 0.87
TMEM260-207ENST00000555497 SMIM8Q96KF7 97 aa20.47■□□□□ 0.87
TMEM260-207ENST00000555497 TAAR3PQ9P1P4 343 aa20.47■□□□□ 0.87
TMEM260-207ENST00000555497 CHD3Q12873 2000 aaKnown RBP20.47■□□□□ 0.87
TMEM260-207ENST00000555497 CADP27708 2225 aa20.46■□□□□ 0.87
TMEM260-207ENST00000555497 WDR82Q6UXN9 313 aa20.46■□□□□ 0.87
TMEM260-207ENST00000555497 OR51H1Q8NH63 302 aa20.46■□□□□ 0.87
TMEM260-207ENST00000555497 TLNRD1Q9H1K6 362 aa20.46■□□□□ 0.87
TMEM260-207ENST00000555497 A6NLC8 198 aa20.46■□□□□ 0.87
TMEM260-207ENST00000555497 PROB1E7EW31 1015 aa20.46■□□□□ 0.87
TMEM260-207ENST00000555497 MBNL2Q5VZF2 373 aaKnown RBP20.46■□□□□ 0.87
TMEM260-207ENST00000555497 ALKBH2Q6NS38 261 aa20.46■□□□□ 0.87
TMEM260-207ENST00000555497 UBAC2Q8NBM4 344 aa20.46■□□□□ 0.87
TMEM260-207ENST00000555497 NARS2Q96I59 477 aaKnown RBP20.46■□□□□ 0.87
TMEM260-207ENST00000555497 ARV1Q9H2C2 271 aa20.46■□□□□ 0.87
TMEM260-207ENST00000555497 EIF2S3P41091 472 aaKnown RBP20.45■□□□□ 0.86
TMEM260-207ENST00000555497 NKX2-1P43699 371 aaPredicted RBP20.45■□□□□ 0.86
TMEM260-207ENST00000555497 SULT1A2P50226 295 aa20.45■□□□□ 0.86
TMEM260-207ENST00000555497 HMGN3Q15651 99 aa20.45■□□□□ 0.86
TMEM260-207ENST00000555497 UQCC3Q6UW78 93 aa20.45■□□□□ 0.86
TMEM260-207ENST00000555497 ARL11Q969Q4 196 aa20.45■□□□□ 0.86
TMEM260-207ENST00000555497 MAGT1Q9H0U3 335 aa20.45■□□□□ 0.86
TMEM260-207ENST00000555497 WASF3Q9UPY6 502 aa20.45■□□□□ 0.86
TMEM260-207ENST00000555497 A0A0G2JRQ6 117 aa20.45■□□□□ 0.86
TMEM260-207ENST00000555497 CLEC18AA5D8T8 446 aa20.45■□□□□ 0.86
TMEM260-207ENST00000555497 VDAC1P21796 283 aa20.45■□□□□ 0.86
TMEM260-207ENST00000555497 TUBG1P23258 451 aa20.45■□□□□ 0.86
TMEM260-207ENST00000555497 LMO1P25800 156 aa20.45■□□□□ 0.86
TMEM260-207ENST00000555497 GCH1P30793 250 aa20.45■□□□□ 0.86
TMEM260-207ENST00000555497 ACP7Q6ZNF0 438 aa20.45■□□□□ 0.86
TMEM260-207ENST00000555497 CLEC18CQ8NCF0 446 aa20.45■□□□□ 0.86
TMEM260-207ENST00000555497 HRH4Q9H3N8 390 aa20.45■□□□□ 0.86
TMEM260-207ENST00000555497 TUBG2Q9NRH3 451 aa20.45■□□□□ 0.86
TMEM260-207ENST00000555497 SPTBN2O15020 2390 aa20.44■□□□□ 0.86
TMEM260-207ENST00000555497 MED6O75586 246 aa20.44■□□□□ 0.86
TMEM260-207ENST00000555497 HEXAP06865 529 aa20.44■□□□□ 0.86
TMEM260-207ENST00000555497 ASCL1P50553 236 aa20.44■□□□□ 0.86
TMEM260-207ENST00000555497 ZNF83P51522 516 aa20.44■□□□□ 0.86
TMEM260-207ENST00000555497 GNMTQ14749 295 aa20.44■□□□□ 0.86
TMEM260-207ENST00000555497 EIF5AL1Q6IS14 154 aaKnown RBP20.44■□□□□ 0.86
TMEM260-207ENST00000555497 S100PBPQ96BU1 408 aa20.44■□□□□ 0.86
TMEM260-207ENST00000555497 SAT2Q96F10 170 aaPredicted RBP20.44■□□□□ 0.86
TMEM260-207ENST00000555497 MMP26Q9NRE1 261 aa20.44■□□□□ 0.86
TMEM260-207ENST00000555497 PTPRZ1P23471 2315 aaPredicted RBP20.44■□□□□ 0.86
TMEM260-207ENST00000555497 DUXBA0A1W2PPF3 345 aa20.43■□□□□ 0.86
TMEM260-207ENST00000555497 FAM24AA6NFZ4 105 aa20.43■□□□□ 0.86
TMEM260-207ENST00000555497 ABCD4O14678 606 aa20.43■□□□□ 0.86
TMEM260-207ENST00000555497 PSG2P11465 335 aa20.43■□□□□ 0.86
TMEM260-207ENST00000555497 C1orf185Q5T7R7 199 aa20.43■□□□□ 0.86
TMEM260-207ENST00000555497 LRP11Q86VZ4 500 aa20.43■□□□□ 0.86
TMEM260-207ENST00000555497 FAM169BQ8N8A8 192 aa20.43■□□□□ 0.86
TMEM260-207ENST00000555497 SNIP1Q8TAD8 396 aaKnown RBP20.43■□□□□ 0.86
TMEM260-207ENST00000555497 SPIN2AQ99865 258 aa20.43■□□□□ 0.86
TMEM260-207ENST00000555497 SPIN2BQ9BPZ2 258 aa20.43■□□□□ 0.86
TMEM260-207ENST00000555497 LRFN3Q9BTN0 628 aa20.43■□□□□ 0.86
TMEM260-207ENST00000555497 CACNA1DQ01668 2161 aa20.43■□□□□ 0.86
TMEM260-207ENST00000555497 HSPA12AO43301 675 aa20.43■□□□□ 0.86
TMEM260-207ENST00000555497 NXPH3O95157 252 aa20.43■□□□□ 0.86
TMEM260-207ENST00000555497 PTBP3O95758 552 aaKnown RBP20.43■□□□□ 0.86
TMEM260-207ENST00000555497 FAM53AQ6NSI3 398 aaPredicted RBP20.43■□□□□ 0.86
TMEM260-207ENST00000555497 METRNQ9UJH8 293 aa20.43■□□□□ 0.86
TMEM260-207ENST00000555497 PPP1R3CQ9UQK1 317 aa20.43■□□□□ 0.86
TMEM260-207ENST00000555497 ID4P47928 161 aa20.42■□□□□ 0.86
TMEM260-207ENST00000555497 AESQ08117 197 aa20.42■□□□□ 0.86
TMEM260-207ENST00000555497 FIP1L1Q6UN15 594 aaKnown RBP20.42■□□□□ 0.86
TMEM260-207ENST00000555497 IL22RA2Q969J5 263 aa20.42■□□□□ 0.86
TMEM260-207ENST00000555497 A0A1B0GWJ7 208 aa20.42■□□□□ 0.86
TMEM260-207ENST00000555497 IGSF23A1L1A6 192 aa20.42■□□□□ 0.86
TMEM260-207ENST00000555497 TMEM218A2RU14 115 aa20.42■□□□□ 0.86
TMEM260-207ENST00000555497 SSSCA1O60232 199 aa20.42■□□□□ 0.86
TMEM260-207ENST00000555497 TMEM50AO95807 157 aa20.42■□□□□ 0.86
TMEM260-207ENST00000555497 CEACAM6P40199 344 aa20.42■□□□□ 0.86
TMEM260-207ENST00000555497 EWSR1Q01844 656 aaKnown RBP eCLIP20.42■□□□□ 0.86
TMEM260-207ENST00000555497 ID3Q02535 119 aa20.42■□□□□ 0.86
TMEM260-207ENST00000555497 ASCL5Q7RTU5 278 aa20.42■□□□□ 0.86
TMEM260-207ENST00000555497 OR2C3Q8N628 320 aa20.42■□□□□ 0.86
TMEM260-207ENST00000555497 OR1L1Q8NH94 360 aa20.42■□□□□ 0.86
TMEM260-207ENST00000555497 ANKRD11Q6UB99 2663 aaPredicted RBP20.41■□□□□ 0.86
TMEM260-207ENST00000555497 NUPL2O15504 423 aaKnown RBP20.41■□□□□ 0.86
TMEM260-207ENST00000555497 IGKV1-39P01597 117 aa20.41■□□□□ 0.86
TMEM260-207ENST00000555497 IGKV1D-39P04432 117 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms