RNA–Protein interactions for RNA: ENST00000555353.5

FOXN3-209, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 1,595 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-209ENST00000555353 GLIPR1P48060 266 aa16.78■□□□□ 0.28
FOXN3-209ENST00000555353 ERVFRD-1P60508 538 aa16.78■□□□□ 0.28
FOXN3-209ENST00000555353 TCF23Q7RTU1 214 aa16.78■□□□□ 0.28
FOXN3-209ENST00000555353 FCAMRQ8WWV6 532 aa16.78■□□□□ 0.28
FOXN3-209ENST00000555353 TMEM158Q8WZ71 300 aa16.78■□□□□ 0.28
FOXN3-209ENST00000555353 HEXA-AS1Q9H8Q6 139 aa16.78■□□□□ 0.28
FOXN3-209ENST00000555353 CHMP1AQ9HD42 196 aaPredicted RBP16.78■□□□□ 0.28
FOXN3-209ENST00000555353 C12orf4Q9NQ89 552 aa16.78■□□□□ 0.28
FOXN3-209ENST00000555353 AK3Q9UIJ7 227 aa16.78■□□□□ 0.28
FOXN3-209ENST00000555353 ODAMA1E959 279 aa16.77■□□□□ 0.28
FOXN3-209ENST00000555353 C17orf98A8MV24 154 aa16.77■□□□□ 0.28
FOXN3-209ENST00000555353 GABARAPH6UMI1 98 aa16.77■□□□□ 0.28
FOXN3-209ENST00000555353 VENTXO95231 258 aa16.77■□□□□ 0.28
FOXN3-209ENST00000555353 RBP4P02753 201 aa16.77■□□□□ 0.28
FOXN3-209ENST00000555353 LPLP06858 475 aa16.77■□□□□ 0.28
FOXN3-209ENST00000555353 CBX5P45973 191 aa16.77■□□□□ 0.28
FOXN3-209ENST00000555353 UBE2E1P51965 193 aa16.77■□□□□ 0.28
FOXN3-209ENST00000555353 DLX6P56179 175 aa16.77■□□□□ 0.28
FOXN3-209ENST00000555353 ZNF79Q15937 498 aa16.77■□□□□ 0.28
FOXN3-209ENST00000555353 C11orf42Q8N5U0 333 aa16.77■□□□□ 0.28
FOXN3-209ENST00000555353 ZDHHC16Q969W1 377 aa16.77■□□□□ 0.28
FOXN3-209ENST00000555353 COQ2Q96H96 371 aa16.77■□□□□ 0.28
FOXN3-209ENST00000555353 ZNF48Q96MX3 618 aaPredicted RBP16.77■□□□□ 0.28
FOXN3-209ENST00000555353 UBE2J1Q9Y385 318 aaPredicted RBP16.77■□□□□ 0.28
FOXN3-209ENST00000555353 A0A1W2PRD5 423 aa16.77■□□□□ 0.27
FOXN3-209ENST00000555353 A0A1W2PRF3 423 aa16.77■□□□□ 0.27
FOXN3-209ENST00000555353 A0A1W2PRM7 423 aa16.77■□□□□ 0.27
FOXN3-209ENST00000555353 TMEM30CPA0ZSE6 113 aa16.77■□□□□ 0.27
FOXN3-209ENST00000555353 CD40LGP29965 261 aa16.77■□□□□ 0.27
FOXN3-209ENST00000555353 PPP5CP53041 499 aa16.77■□□□□ 0.27
FOXN3-209ENST00000555353 PAX5Q02548 391 aa16.77■□□□□ 0.27
FOXN3-209ENST00000555353 TUSC1Q2TAM9 212 aa16.77■□□□□ 0.27
FOXN3-209ENST00000555353 DEFB112Q30KQ8 113 aa16.77■□□□□ 0.27
FOXN3-209ENST00000555353 OLFML2AQ68BL7 652 aa16.77■□□□□ 0.27
FOXN3-209ENST00000555353 SLC35E4Q6ICL7 350 aa16.77■□□□□ 0.27
FOXN3-209ENST00000555353 ZNF782Q6ZMW2 699 aaPredicted RBP16.77■□□□□ 0.27
FOXN3-209ENST00000555353 RTN4RL2Q86UN3 420 aa16.77■□□□□ 0.27
FOXN3-209ENST00000555353 SRRQ9GZT4 340 aa16.77■□□□□ 0.27
FOXN3-209ENST00000555353 MDFIC2A0A1B0GVS7 189 aa16.76■□□□□ 0.27
FOXN3-209ENST00000555353 POM121CA8CG34 1229 aa16.76■□□□□ 0.27
FOXN3-209ENST00000555353 RNF212BA8MTL3 300 aa16.76■□□□□ 0.27
FOXN3-209ENST00000555353 NPFFO15130 113 aa16.76■□□□□ 0.27
FOXN3-209ENST00000555353 PTHLHP12272 177 aa16.76■□□□□ 0.27
FOXN3-209ENST00000555353 BAMBIQ13145 260 aa16.76■□□□□ 0.27
FOXN3-209ENST00000555353 Q8N402 240 aa16.76■□□□□ 0.27
FOXN3-209ENST00000555353 PIP4P2Q8N4L2 257 aa16.76■□□□□ 0.27
FOXN3-209ENST00000555353 SMIM4Q8WVI0 70 aa16.76■□□□□ 0.27
FOXN3-209ENST00000555353 NUDCD2Q8WVJ2 157 aa16.76■□□□□ 0.27
FOXN3-209ENST00000555353 GAL3ST2Q9H3Q3 398 aa16.76■□□□□ 0.27
FOXN3-209ENST00000555353 OR6C3Q9NZP0 311 aa16.76■□□□□ 0.27
FOXN3-209ENST00000555353 FAM96BQ9Y3D0 163 aa16.76■□□□□ 0.27
FOXN3-209ENST00000555353 FBN1P35555 2871 aaKnown RBP16.75■□□□□ 0.27
FOXN3-209ENST00000555353 TRIM77I1YAP6 450 aa16.75■□□□□ 0.27
FOXN3-209ENST00000555353 GSTZ1O43708 216 aaPredicted RBP16.75■□□□□ 0.27
FOXN3-209ENST00000555353 DTYMKP23919 212 aa16.75■□□□□ 0.27
FOXN3-209ENST00000555353 COX7A1P24310 79 aa16.75■□□□□ 0.27
FOXN3-209ENST00000555353 ZNF497Q6ZNH5 498 aa16.75■□□□□ 0.27
FOXN3-209ENST00000555353 PLPPR1Q8TBJ4 325 aa16.75■□□□□ 0.27
FOXN3-209ENST00000555353 GPX8Q8TED1 209 aa16.75■□□□□ 0.27
FOXN3-209ENST00000555353 DYRK2Q92630 601 aa16.75■□□□□ 0.27
FOXN3-209ENST00000555353 GCDHQ92947 438 aaPredicted RBP16.75■□□□□ 0.27
FOXN3-209ENST00000555353 CCDC32Q9BV29 185 aa16.75■□□□□ 0.27
FOXN3-209ENST00000555353 IFT46Q9NQC8 304 aa16.75■□□□□ 0.27
FOXN3-209ENST00000555353 ELF5Q9UKW6 265 aaPredicted RBP16.75■□□□□ 0.27
FOXN3-209ENST00000555353 MEIKINA0A087WXM9 373 aa16.74■□□□□ 0.27
FOXN3-209ENST00000555353 A0A0U1RQK1 487 aa16.74■□□□□ 0.27
FOXN3-209ENST00000555353 MEIOCA2RUB1 952 aa16.74■□□□□ 0.27
FOXN3-209ENST00000555353 RBBP9O75884 186 aa16.74■□□□□ 0.27
FOXN3-209ENST00000555353 IGHV1-8P0DP01 117 aa16.74■□□□□ 0.27
FOXN3-209ENST00000555353 ACTBP60709 375 aa16.74■□□□□ 0.27
FOXN3-209ENST00000555353 ACTG1P63261 375 aa16.74■□□□□ 0.27
FOXN3-209ENST00000555353 RSBN1Q5VWQ0 802 aaPredicted RBP16.74■□□□□ 0.27
FOXN3-209ENST00000555353 HCP5Q6MZN7 132 aa16.74■□□□□ 0.27
FOXN3-209ENST00000555353 MOB1BQ7L9L4 216 aa16.74■□□□□ 0.27
FOXN3-209ENST00000555353 PNKDQ8N490 385 aa16.74■□□□□ 0.27
FOXN3-209ENST00000555353 ZNF565Q8N9K5 539 aa16.74■□□□□ 0.27
FOXN3-209ENST00000555353 CORO2AQ92828 525 aa16.74■□□□□ 0.27
FOXN3-209ENST00000555353 NCOR1P1Q9H4R4 102 aa16.74■□□□□ 0.27
FOXN3-209ENST00000555353 ESM1Q9NQ30 184 aa16.74■□□□□ 0.27
FOXN3-209ENST00000555353 TAS2R3Q9NYW6 316 aa16.74■□□□□ 0.27
FOXN3-209ENST00000555353 KIF25Q9UIL4 384 aa16.74■□□□□ 0.27
FOXN3-209ENST00000555353 TRAPPC2LQ9UL33 140 aa16.74■□□□□ 0.27
FOXN3-209ENST00000555353 MGAT4AQ9UM21 535 aa16.74■□□□□ 0.27
FOXN3-209ENST00000555353 COL6A5A8TX70 2615 aa16.74■□□□□ 0.27
FOXN3-209ENST00000555353 NAPSAO96009 420 aa16.73■□□□□ 0.27
FOXN3-209ENST00000555353 SAA4P35542 130 aa16.73■□□□□ 0.27
FOXN3-209ENST00000555353 DGCR2P98153 550 aa16.73■□□□□ 0.27
FOXN3-209ENST00000555353 SSBP1Q04837 148 aaKnown RBP16.73■□□□□ 0.27
FOXN3-209ENST00000555353 KRTAP24-1Q3LI83 254 aa16.73■□□□□ 0.27
FOXN3-209ENST00000555353 RNASE12Q5GAN4 147 aaKnown RBP16.73■□□□□ 0.27
FOXN3-209ENST00000555353 ZDHHC22Q8N966 263 aa16.73■□□□□ 0.27
FOXN3-209ENST00000555353 OR13D1Q8NGV5 346 aa16.73■□□□□ 0.27
FOXN3-209ENST00000555353 OR52I2Q8NH67 350 aa16.73■□□□□ 0.27
FOXN3-209ENST00000555353 SETD6Q8TBK2 473 aa16.73■□□□□ 0.27
FOXN3-209ENST00000555353 MDFIQ99750 246 aa16.73■□□□□ 0.27
FOXN3-209ENST00000555353 TRBV6-6A0A0A6YYG2 114 aa16.72■□□□□ 0.27
FOXN3-209ENST00000555353 DNAJC9-AS1A6NH13 148 aa16.72■□□□□ 0.27
FOXN3-209ENST00000555353 MT-ND4P03905 459 aa16.72■□□□□ 0.27
FOXN3-209ENST00000555353 GLP1RP43220 463 aa16.72■□□□□ 0.27
FOXN3-209ENST00000555353 INPP1P49441 399 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 115.6 ms