RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 OR5AU1Q8NGC0 362 aa9.43□□□□□ -0.9
VRK1-204ENST00000555351 ST6GALNAC6Q969X2 333 aa9.43□□□□□ -0.9
VRK1-204ENST00000555351 CITED2Q99967 270 aaPredicted RBP9.43□□□□□ -0.9
VRK1-204ENST00000555351 SELENOIQ9C0D9 397 aa9.43□□□□□ -0.9
VRK1-204ENST00000555351 MBNL3Q9NUK0 354 aaKnown RBP9.43□□□□□ -0.9
VRK1-204ENST00000555351 ETAA1Q9NY74 926 aa9.43□□□□□ -0.9
VRK1-204ENST00000555351 LRRC42Q9Y546 428 aa9.43□□□□□ -0.9
VRK1-204ENST00000555351 PEX16Q9Y5Y5 336 aa9.43□□□□□ -0.9
VRK1-204ENST00000555351 NOTCH1P46531 2555 aa9.43□□□□□ -0.9
VRK1-204ENST00000555351 C12orf77C9JDV5 145 aa9.42□□□□□ -0.9
VRK1-204ENST00000555351 ANKRD65E5RJM6 399 aa9.42□□□□□ -0.9
VRK1-204ENST00000555351 HSD17B6O14756 317 aa9.42□□□□□ -0.9
VRK1-204ENST00000555351 CRTAPO75718 401 aaPredicted RBP9.42□□□□□ -0.9
VRK1-204ENST00000555351 BPNT1O95861 308 aa9.42□□□□□ -0.9
VRK1-204ENST00000555351 SNRNP70P08621 437 aaKnown RBP9.42□□□□□ -0.9
VRK1-204ENST00000555351 UCHL1P09936 223 aa9.42□□□□□ -0.9
VRK1-204ENST00000555351 SRMP19623 302 aa9.42□□□□□ -0.9
VRK1-204ENST00000555351 AQP4P55087 323 aa9.42□□□□□ -0.9
VRK1-204ENST00000555351 GP2P55259 537 aaKnown RBP9.42□□□□□ -0.9
VRK1-204ENST00000555351 TPBGQ13641 420 aa9.42□□□□□ -0.9
VRK1-204ENST00000555351 LY6G6FQ5SQ64 297 aa9.42□□□□□ -0.9
VRK1-204ENST00000555351 SYT6Q5T7P8 510 aaPredicted RBP9.42□□□□□ -0.9
VRK1-204ENST00000555351 SAMD5Q5TGI4 173 aa9.42□□□□□ -0.9
VRK1-204ENST00000555351 SLC25A48Q6ZT89 311 aaKnown RBP9.42□□□□□ -0.9
VRK1-204ENST00000555351 LRRTM1Q86UE6 522 aa9.42□□□□□ -0.9
VRK1-204ENST00000555351 DRAM1Q8N682 238 aa9.42□□□□□ -0.9
VRK1-204ENST00000555351 OR4X2Q8NGF9 303 aa9.42□□□□□ -0.9
VRK1-204ENST00000555351 OR8H1Q8NGG4 311 aa9.42□□□□□ -0.9
VRK1-204ENST00000555351 OR56B4Q8NH76 319 aa9.42□□□□□ -0.9
VRK1-204ENST00000555351 KCNG3Q8TAE7 436 aa9.42□□□□□ -0.9
VRK1-204ENST00000555351 NRG4Q8WWG1 115 aa9.42□□□□□ -0.9
VRK1-204ENST00000555351 LEAP2Q969E1 77 aa9.42□□□□□ -0.9
VRK1-204ENST00000555351 OR5M11Q96RB7 305 aa9.42□□□□□ -0.9
VRK1-204ENST00000555351 TRAPPC2LQ9UL33 140 aa9.42□□□□□ -0.9
VRK1-204ENST00000555351 TRAV39A0A0B4J263 110 aa9.41□□□□□ -0.9
VRK1-204ENST00000555351 IGHV1-3A0A0C4DH29 117 aa9.41□□□□□ -0.9
VRK1-204ENST00000555351 SLC22A1O15245 554 aa9.41□□□□□ -0.9
VRK1-204ENST00000555351 RGS10O43665 173 aa9.41□□□□□ -0.9
VRK1-204ENST00000555351 TMEM11P17152 192 aa9.41□□□□□ -0.9
VRK1-204ENST00000555351 CD1BP29016 333 aa9.41□□□□□ -0.9
VRK1-204ENST00000555351 GNG10P50151 68 aa9.41□□□□□ -0.9
VRK1-204ENST00000555351 HTD2P86397 168 aa9.41□□□□□ -0.9
VRK1-204ENST00000555351 MED22Q15528 200 aa9.41□□□□□ -0.9
VRK1-204ENST00000555351 LTC4SQ16873 150 aa9.41□□□□□ -0.9
VRK1-204ENST00000555351 BEAN1Q3B7T3 259 aa9.41□□□□□ -0.9
VRK1-204ENST00000555351 NSUN5P1Q3KNT7 163 aa9.41□□□□□ -0.9
VRK1-204ENST00000555351 TMEM95Q3KNT9 176 aa9.41□□□□□ -0.9
VRK1-204ENST00000555351 HSD17B12Q53GQ0 312 aa9.41□□□□□ -0.9
VRK1-204ENST00000555351 SIGIRRQ6IA17 410 aa9.41□□□□□ -0.9
VRK1-204ENST00000555351 PRSS48Q7RTY5 328 aa9.41□□□□□ -0.9
VRK1-204ENST00000555351 C5orf56Q8N8D9 126 aa9.41□□□□□ -0.9
VRK1-204ENST00000555351 ZNF439Q8NDP4 499 aa9.41□□□□□ -0.9
VRK1-204ENST00000555351 WFDC9Q8NEX5 89 aa9.41□□□□□ -0.9
VRK1-204ENST00000555351 CHPT1Q8WUD6 406 aa9.41□□□□□ -0.9
VRK1-204ENST00000555351 CCDC107Q8WV48 283 aa9.41□□□□□ -0.9
VRK1-204ENST00000555351 RTN4IP1Q8WWV3 396 aaPredicted RBP9.41□□□□□ -0.9
VRK1-204ENST00000555351 UFD1Q92890 307 aa9.41□□□□□ -0.9
VRK1-204ENST00000555351 TMED9Q9BVK6 235 aa9.41□□□□□ -0.9
VRK1-204ENST00000555351 TM2D1Q9BX74 207 aa9.41□□□□□ -0.9
VRK1-204ENST00000555351 BANF2Q9H503 90 aa9.41□□□□□ -0.9
VRK1-204ENST00000555351 KCNIP1Q9NZI2 227 aa9.41□□□□□ -0.9
VRK1-204ENST00000555351 TSSC4Q9Y5U2 329 aaPredicted RBP9.41□□□□□ -0.9
VRK1-204ENST00000555351 ARL6IP5O75915 188 aa9.4□□□□□ -0.9
VRK1-204ENST00000555351 IGKV1D-33P01593 117 aa9.4□□□□□ -0.9
VRK1-204ENST00000555351 IGKV1-33P01594 117 aa9.4□□□□□ -0.9
VRK1-204ENST00000555351 IGHV3-7P01780 117 aa9.4□□□□□ -0.9
VRK1-204ENST00000555351 IGHG2P01859 326 aa9.4□□□□□ -0.9
VRK1-204ENST00000555351 HBZP02008 142 aa9.4□□□□□ -0.9
VRK1-204ENST00000555351 VSIG8P0DPA2 414 aa9.4□□□□□ -0.9
VRK1-204ENST00000555351 CRHBPP24387 322 aa9.4□□□□□ -0.9
VRK1-204ENST00000555351 CHATP28329 748 aa9.4□□□□□ -0.9
VRK1-204ENST00000555351 SLC6A1P30531 599 aa9.4□□□□□ -0.9
VRK1-204ENST00000555351 RPS27AP62979 156 aaKnown RBP9.4□□□□□ -0.9
VRK1-204ENST00000555351 MLLT11Q13015 90 aaPredicted RBP9.4□□□□□ -0.9
VRK1-204ENST00000555351 DIAPH2-AS1Q14236 149 aa9.4□□□□□ -0.9
VRK1-204ENST00000555351 HES1Q14469 280 aa9.4□□□□□ -0.9
VRK1-204ENST00000555351 FBLN7Q53RD9 439 aa9.4□□□□□ -0.9
VRK1-204ENST00000555351 RBM48Q5RL73 367 aaKnown RBP9.4□□□□□ -0.9
VRK1-204ENST00000555351 REC114Q7Z4M0 266 aa9.4□□□□□ -0.9
VRK1-204ENST00000555351 CEACAM19Q7Z692 300 aa9.4□□□□□ -0.9
VRK1-204ENST00000555351 TGIF2LXQ8IUE1 241 aa9.4□□□□□ -0.9
VRK1-204ENST00000555351 COMMD1Q8N668 190 aa9.4□□□□□ -0.9
VRK1-204ENST00000555351 Q8N6K4 173 aa9.4□□□□□ -0.9
VRK1-204ENST00000555351 OR6M1Q8NGM8 313 aa9.4□□□□□ -0.9
VRK1-204ENST00000555351 OR2T10Q8NGZ9 312 aa9.4□□□□□ -0.9
VRK1-204ENST00000555351 R3HDM4Q96D70 268 aa9.4□□□□□ -0.9
VRK1-204ENST00000555351 NEDD4LQ96PU5 975 aa9.4□□□□□ -0.9
VRK1-204ENST00000555351 GNG12Q9UBI6 72 aa9.4□□□□□ -0.9
VRK1-204ENST00000555351 JPT1Q9UK76 154 aa9.4□□□□□ -0.9
VRK1-204ENST00000555351 ERICH4A6NGS2 130 aa9.39□□□□□ -0.91
VRK1-204ENST00000555351 TMEM14DPA8MWL7 114 aa9.39□□□□□ -0.91
VRK1-204ENST00000555351 LANCL1O43813 399 aa9.39□□□□□ -0.91
VRK1-204ENST00000555351 RGS11O94810 467 aa9.39□□□□□ -0.91
VRK1-204ENST00000555351 CPEP16870 476 aa9.39□□□□□ -0.91
VRK1-204ENST00000555351 RCC1P18754 421 aaPredicted RBP9.39□□□□□ -0.91
VRK1-204ENST00000555351 HTR2CP28335 458 aa9.39□□□□□ -0.91
VRK1-204ENST00000555351 QRFPP83859 136 aa9.39□□□□□ -0.91
VRK1-204ENST00000555351 TCTEX1D4Q5JR98 221 aa9.39□□□□□ -0.91
VRK1-204ENST00000555351 FAM27D1Q5T7N8 215 aa9.39□□□□□ -0.91
VRK1-204ENST00000555351 LIPKQ5VXJ0 399 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms