RNA–Protein interactions for RNA: ENST00000555301.1

CHD8-208, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-208ENST00000555301 SCGB2A2Q13296 93 aa11.68□□□□□ -0.54
CHD8-208ENST00000555301 KLF17Q5JT82 389 aaPredicted RBP11.68□□□□□ -0.54
CHD8-208ENST00000555301 CNIH2Q6PI25 160 aa11.68□□□□□ -0.54
CHD8-208ENST00000555301 Q6ZPA2 131 aa11.68□□□□□ -0.54
CHD8-208ENST00000555301 Q6ZS49 121 aa11.68□□□□□ -0.54
CHD8-208ENST00000555301 PRR18Q8N4B5 295 aa11.68□□□□□ -0.54
CHD8-208ENST00000555301 GALMQ96C23 342 aa11.68□□□□□ -0.54
CHD8-208ENST00000555301 NUP50Q9UKX7 468 aa11.68□□□□□ -0.54
CHD8-208ENST00000555301 ABCA1O95477 2261 aa11.67□□□□□ -0.54
CHD8-208ENST00000555301 A0A087X0M5 115 aa11.67□□□□□ -0.54
CHD8-208ENST00000555301 IGHV1-69DA0A0B4J2H0 117 aa11.67□□□□□ -0.54
CHD8-208ENST00000555301 A0A1B0GX30 115 aa11.67□□□□□ -0.54
CHD8-208ENST00000555301 TRDCB7Z8K6 153 aa11.67□□□□□ -0.54
CHD8-208ENST00000555301 SDCBPO00560 298 aaPredicted RBP11.67□□□□□ -0.54
CHD8-208ENST00000555301 SSX5O60225 188 aa11.67□□□□□ -0.54
CHD8-208ENST00000555301 IGHV1-69P01742 117 aa11.67□□□□□ -0.54
CHD8-208ENST00000555301 IGHV4-38-2P0DP08 117 aa11.67□□□□□ -0.54
CHD8-208ENST00000555301 COX7A1P24310 79 aa11.67□□□□□ -0.54
CHD8-208ENST00000555301 NFYBP25208 207 aa11.67□□□□□ -0.54
CHD8-208ENST00000555301 TNFSF8P32971 234 aa11.67□□□□□ -0.54
CHD8-208ENST00000555301 HTD2P86397 168 aa11.67□□□□□ -0.54
CHD8-208ENST00000555301 LTC4SQ16873 150 aa11.67□□□□□ -0.54
CHD8-208ENST00000555301 CNPY1Q3B7I2 92 aa11.67□□□□□ -0.54
CHD8-208ENST00000555301 CHRFAM7AQ494W8 412 aa11.67□□□□□ -0.54
CHD8-208ENST00000555301 STEAP3Q658P3 488 aa11.67□□□□□ -0.54
CHD8-208ENST00000555301 IL17RELQ6ZVW7 336 aa11.67□□□□□ -0.54
CHD8-208ENST00000555301 SNX29P2Q8IUI4 249 aa11.67□□□□□ -0.54
CHD8-208ENST00000555301 OR1L1Q8NH94 360 aa11.67□□□□□ -0.54
CHD8-208ENST00000555301 OCSTAMPQ9BR26 566 aa11.67□□□□□ -0.54
CHD8-208ENST00000555301 ST6GALNAC5Q9BVH7 336 aa11.67□□□□□ -0.54
CHD8-208ENST00000555301 SUCNR1Q9BXA5 334 aa11.67□□□□□ -0.54
CHD8-208ENST00000555301 SCPEP1Q9HB40 452 aa11.67□□□□□ -0.54
CHD8-208ENST00000555301 ZNF286AQ9HBT8 521 aa11.67□□□□□ -0.54
CHD8-208ENST00000555301 ZNF230Q9UIE0 474 aaPredicted RBP11.67□□□□□ -0.54
CHD8-208ENST00000555301 JPT1Q9UK76 154 aa11.67□□□□□ -0.54
CHD8-208ENST00000555301 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.67□□□□□ -0.543e-6■■■□□ 18.5
CHD8-208ENST00000555301 CSPG4Q6UVK1 2322 aa11.67□□□□□ -0.54
CHD8-208ENST00000555301 F8P00451 2351 aa11.67□□□□□ -0.54
CHD8-208ENST00000555301 IGHV2-26A0A0B4J1V2 119 aa11.66□□□□□ -0.54
CHD8-208ENST00000555301 SULT1C2O00338 296 aa11.66□□□□□ -0.54
CHD8-208ENST00000555301 FABP7O15540 132 aa11.66□□□□□ -0.54
CHD8-208ENST00000555301 DIRAS3O95661 229 aa11.66□□□□□ -0.54
CHD8-208ENST00000555301 PTHLHP12272 177 aa11.66□□□□□ -0.54
CHD8-208ENST00000555301 SRD5A1P18405 259 aa11.66□□□□□ -0.54
CHD8-208ENST00000555301 CD34P28906 385 aa11.66□□□□□ -0.54
CHD8-208ENST00000555301 GDNFP39905 211 aa11.66□□□□□ -0.54
CHD8-208ENST00000555301 DLX1P56177 255 aa11.66□□□□□ -0.54
CHD8-208ENST00000555301 MRPS10P82664 201 aaKnown RBP11.66□□□□□ -0.54
CHD8-208ENST00000555301 KLRD1Q13241 179 aa11.66□□□□□ -0.54
CHD8-208ENST00000555301 Q3ZCU0 254 aa11.66□□□□□ -0.54
CHD8-208ENST00000555301 PYHIN1Q6K0P9 492 aa11.66□□□□□ -0.54
CHD8-208ENST00000555301 HCP5Q6MZN7 132 aa11.66□□□□□ -0.54
CHD8-208ENST00000555301 PDZD9Q8IXQ8 264 aa11.66□□□□□ -0.54
CHD8-208ENST00000555301 ABHD12Q8N2K0 398 aa11.66□□□□□ -0.54
CHD8-208ENST00000555301 PNKDQ8N490 385 aa11.66□□□□□ -0.54
CHD8-208ENST00000555301 OR11H6Q8NGC7 330 aa11.66□□□□□ -0.54
CHD8-208ENST00000555301 OR4A4PQ8NGN8 299 aa11.66□□□□□ -0.54
CHD8-208ENST00000555301 UBALD1Q8TB05 177 aa11.66□□□□□ -0.54
CHD8-208ENST00000555301 CLEC7AQ9BXN2 247 aa11.66□□□□□ -0.54
CHD8-208ENST00000555301 OR2S2Q9NQN1 319 aa11.66□□□□□ -0.54
CHD8-208ENST00000555301 GFOD1Q9NXC2 390 aa11.66□□□□□ -0.54
CHD8-208ENST00000555301 GNG12Q9UBI6 72 aa11.66□□□□□ -0.54
CHD8-208ENST00000555301 YLPM1P49750 1951 aaKnown RBP11.66□□□□□ -0.54
CHD8-208ENST00000555301 ZANQ9Y493 2812 aa11.66□□□□□ -0.54
CHD8-208ENST00000555301 SVEP1Q4LDE5 3571 aa11.66□□□□□ -0.54
CHD8-208ENST00000555301 IGHV3OR16-10A0A075B7F0 116 aa11.65□□□□□ -0.54
CHD8-208ENST00000555301 FABP12A6NFH5 140 aa11.65□□□□□ -0.54
CHD8-208ENST00000555301 TOR1AO14656 332 aa11.65□□□□□ -0.54
CHD8-208ENST00000555301 CRLF1O75462 422 aa11.65□□□□□ -0.54
CHD8-208ENST00000555301 RGS11O94810 467 aa11.65□□□□□ -0.54
CHD8-208ENST00000555301 LPLP06858 475 aa11.65□□□□□ -0.54
CHD8-208ENST00000555301 SCTP09683 121 aa11.65□□□□□ -0.54
CHD8-208ENST00000555301 PRRX1P54821 245 aa11.65□□□□□ -0.54
CHD8-208ENST00000555301 LOXL3P58215 753 aa11.65□□□□□ -0.54
CHD8-208ENST00000555301 PRB3Q04118 309 aaPredicted RBP11.65□□□□□ -0.54
CHD8-208ENST00000555301 IL18Q14116 193 aa11.65□□□□□ -0.54
CHD8-208ENST00000555301 MIDNQ504T8 468 aa11.65□□□□□ -0.54
CHD8-208ENST00000555301 ZNF626Q68DY1 528 aa11.65□□□□□ -0.54
CHD8-208ENST00000555301 C9orf139Q6ZV77 190 aa11.65□□□□□ -0.54
CHD8-208ENST00000555301 HOGA1Q86XE5 327 aa11.65□□□□□ -0.54
CHD8-208ENST00000555301 OR6Q1Q8NGQ2 317 aa11.65□□□□□ -0.54
CHD8-208ENST00000555301 OR9G1Q8NH87 305 aa11.65□□□□□ -0.54
CHD8-208ENST00000555301 ZNF596Q8TC21 504 aa11.65□□□□□ -0.54
CHD8-208ENST00000555301 GPX8Q8TED1 209 aa11.65□□□□□ -0.54
CHD8-208ENST00000555301 IL1F10Q8WWZ1 152 aa11.65□□□□□ -0.54
CHD8-208ENST00000555301 MAFIPQ8WZ33 124 aa11.65□□□□□ -0.54
CHD8-208ENST00000555301 MS4A7Q9GZW8 240 aaPredicted RBP11.65□□□□□ -0.54
CHD8-208ENST00000555301 IFT46Q9NQC8 304 aa11.65□□□□□ -0.54
CHD8-208ENST00000555301 NPFFO15130 113 aa11.64□□□□□ -0.55
CHD8-208ENST00000555301 CTDSPLO15194 276 aa11.64□□□□□ -0.55
CHD8-208ENST00000555301 YPEL1O60688 119 aa11.64□□□□□ -0.55
CHD8-208ENST00000555301 CTXN2P0C2S0 81 aa11.64□□□□□ -0.55
CHD8-208ENST00000555301 GSTT2P0CG29 244 aa11.64□□□□□ -0.55
CHD8-208ENST00000555301 GSTT2BP0CG30 244 aa11.64□□□□□ -0.55
CHD8-208ENST00000555301 EPHA1P21709 976 aa11.64□□□□□ -0.55
CHD8-208ENST00000555301 ZBTB25P24278 435 aa11.64□□□□□ -0.55
CHD8-208ENST00000555301 LGALS4P56470 323 aa11.64□□□□□ -0.55
CHD8-208ENST00000555301 MADCAM1Q13477 382 aa11.64□□□□□ -0.55
CHD8-208ENST00000555301 SPANXN2Q5MJ10 180 aa11.64□□□□□ -0.55
CHD8-208ENST00000555301 BRD3OSQ6XYD6 125 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms