RNA–Protein interactions for RNA: ENST00000555259.5

SCFD1-215, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,553 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-215ENST00000555259 TMEM179BQ7Z7N9 219 aa7.31□□□□□ -1.24
SCFD1-215ENST00000555259 Q8N402 240 aa7.31□□□□□ -1.24
SCFD1-215ENST00000555259 TCTEX1D1Q8N7M0 179 aa7.31□□□□□ -1.24
SCFD1-215ENST00000555259 ARL11Q969Q4 196 aa7.31□□□□□ -1.24
SCFD1-215ENST00000555259 CST11Q9H112 138 aa7.31□□□□□ -1.24
SCFD1-215ENST00000555259 A3GALT2U3KPV4 340 aa7.31□□□□□ -1.24
SCFD1-215ENST00000555259 MUC4Q99102 2169 aa7.3□□□□□ -1.24
SCFD1-215ENST00000555259 DYNC1H1Q14204 4646 aaKnown RBP7.3□□□□□ -1.24
SCFD1-215ENST00000555259 NBR2O15453 112 aa7.3□□□□□ -1.24
SCFD1-215ENST00000555259 PRKYO43930 277 aa7.3□□□□□ -1.24
SCFD1-215ENST00000555259 TPPPO94811 219 aa7.3□□□□□ -1.24
SCFD1-215ENST00000555259 MT-ND2P03891 347 aa7.3□□□□□ -1.24
SCFD1-215ENST00000555259 TMEM225BP0DP42 221 aa7.3□□□□□ -1.24
SCFD1-215ENST00000555259 ZNF20P17024 532 aa7.3□□□□□ -1.24
SCFD1-215ENST00000555259 ZP3P21754 424 aa7.3□□□□□ -1.24
SCFD1-215ENST00000555259 PRDX6P30041 224 aa7.3□□□□□ -1.24
SCFD1-215ENST00000555259 ZNF134P52741 427 aa7.3□□□□□ -1.24
SCFD1-215ENST00000555259 TPPP2P59282 170 aa7.3□□□□□ -1.24
SCFD1-215ENST00000555259 CD81P60033 236 aa7.3□□□□□ -1.24
SCFD1-215ENST00000555259 KLF5Q13887 457 aaPredicted RBP7.3□□□□□ -1.24
SCFD1-215ENST00000555259 Q3ZCU0 254 aa7.3□□□□□ -1.24
SCFD1-215ENST00000555259 ZNF439Q8NDP4 499 aa7.3□□□□□ -1.24
SCFD1-215ENST00000555259 RGP1Q92546 391 aaPredicted RBP7.3□□□□□ -1.24
SCFD1-215ENST00000555259 UTP4Q969X6 686 aaKnown RBP7.3□□□□□ -1.24
SCFD1-215ENST00000555259 MS4A10Q96PG2 267 aa7.3□□□□□ -1.24
SCFD1-215ENST00000555259 TBX5Q99593 518 aa7.3□□□□□ -1.24
SCFD1-215ENST00000555259 ZNF251Q9BRH9 671 aa7.3□□□□□ -1.24
SCFD1-215ENST00000555259 ZNF556Q9HAH1 456 aa7.3□□□□□ -1.24
SCFD1-215ENST00000555259 RANGRFQ9HD47 186 aaPredicted RBP7.3□□□□□ -1.24
SCFD1-215ENST00000555259 A0A1W2PQL4 384 aaPredicted RBP7.29□□□□□ -1.24
SCFD1-215ENST00000555259 METTL15A6NJ78 407 aa7.29□□□□□ -1.24
SCFD1-215ENST00000555259 DBTP11182 482 aaKnown RBP7.29□□□□□ -1.24
SCFD1-215ENST00000555259 FAM98BQ52LJ0 330 aaKnown RBP7.29□□□□□ -1.24
SCFD1-215ENST00000555259 CT45A1Q5HYN5 189 aa7.29□□□□□ -1.24
SCFD1-215ENST00000555259 LGALS9CQ6DKI2 356 aa7.29□□□□□ -1.24
SCFD1-215ENST00000555259 ELP2Q6IA86 826 aa7.29□□□□□ -1.24
SCFD1-215ENST00000555259 DEFB125Q8N687 156 aa7.29□□□□□ -1.24
SCFD1-215ENST00000555259 OR13C9Q8NGT0 318 aa7.29□□□□□ -1.24
SCFD1-215ENST00000555259 OR10AC1Q8NH08 325 aa7.29□□□□□ -1.24
SCFD1-215ENST00000555259 CT45A3Q8NHU0 189 aa7.29□□□□□ -1.24
SCFD1-215ENST00000555259 NEURL2Q9BR09 285 aa7.29□□□□□ -1.24
SCFD1-215ENST00000555259 DPCDQ9BVM2 203 aaPredicted RBP7.29□□□□□ -1.24
SCFD1-215ENST00000555259 ETAA1Q9NY74 926 aa7.29□□□□□ -1.24
SCFD1-215ENST00000555259 CNOT2Q9NZN8 540 aaKnown RBP7.29□□□□□ -1.24
SCFD1-215ENST00000555259 NUBP2Q9Y5Y2 271 aa7.29□□□□□ -1.24
SCFD1-215ENST00000555259 LOC100996750A0A140TA64 210 aa7.29□□□□□ -1.24
SCFD1-215ENST00000555259 TMEM30CPA0ZSE6 113 aa7.29□□□□□ -1.24
SCFD1-215ENST00000555259 LANCL1O43813 399 aa7.29□□□□□ -1.24
SCFD1-215ENST00000555259 SULT1C4O75897 302 aa7.29□□□□□ -1.24
SCFD1-215ENST00000555259 NDUFA3O95167 84 aa7.29□□□□□ -1.24
SCFD1-215ENST00000555259 CST1P01037 141 aa7.29□□□□□ -1.24
SCFD1-215ENST00000555259 CSTBP04080 98 aaKnown RBP7.29□□□□□ -1.24
SCFD1-215ENST00000555259 CSN3P07498 182 aa7.29□□□□□ -1.24
SCFD1-215ENST00000555259 CD7P09564 240 aa7.29□□□□□ -1.24
SCFD1-215ENST00000555259 MED14OSP0DP75 135 aa7.29□□□□□ -1.24
SCFD1-215ENST00000555259 EGR2P11161 476 aaPredicted RBP7.29□□□□□ -1.24
SCFD1-215ENST00000555259 SYNJ2BPP57105 145 aa7.29□□□□□ -1.24
SCFD1-215ENST00000555259 CX3CL1P78423 397 aa7.29□□□□□ -1.24
SCFD1-215ENST00000555259 EWSR1Q01844 656 aaKnown RBP eCLIP7.29□□□□□ -1.24
SCFD1-215ENST00000555259 IL13RA2Q14627 380 aa7.29□□□□□ -1.24
SCFD1-215ENST00000555259 PIGYQ3MUY2 71 aa7.29□□□□□ -1.24
SCFD1-215ENST00000555259 SPATS1Q496A3 300 aa7.29□□□□□ -1.24
SCFD1-215ENST00000555259 ACTBL2Q562R1 376 aa7.29□□□□□ -1.24
SCFD1-215ENST00000555259 AADACL4Q5VUY2 407 aa7.29□□□□□ -1.24
SCFD1-215ENST00000555259 TMEM244Q5VVB8 128 aa7.29□□□□□ -1.24
SCFD1-215ENST00000555259 ZNF660Q6AZW8 331 aaPredicted RBP7.29□□□□□ -1.24
SCFD1-215ENST00000555259 CD200R1LQ6Q8B3 271 aa7.29□□□□□ -1.24
SCFD1-215ENST00000555259 HS3ST5Q8IZT8 346 aa7.29□□□□□ -1.24
SCFD1-215ENST00000555259 SUMF2Q8NBJ7 301 aa7.29□□□□□ -1.24
SCFD1-215ENST00000555259 NPBQ8NG41 125 aa7.29□□□□□ -1.24
SCFD1-215ENST00000555259 KRTAP4-6Q9BYQ5 205 aa7.29□□□□□ -1.24
SCFD1-215ENST00000555259 WFDC10AQ9H1F0 79 aa7.29□□□□□ -1.24
SCFD1-215ENST00000555259 SLA2Q9H6Q3 261 aa7.29□□□□□ -1.24
SCFD1-215ENST00000555259 SRD5A3Q9H8P0 318 aa7.29□□□□□ -1.24
SCFD1-215ENST00000555259 SIGLEC8Q9NYZ4 499 aa7.29□□□□□ -1.24
SCFD1-215ENST00000555259 ZNF581Q9P0T4 197 aa7.29□□□□□ -1.24
SCFD1-215ENST00000555259 KLK5Q9Y337 293 aaPredicted RBP7.29□□□□□ -1.24
SCFD1-215ENST00000555259 DNAH11Q96DT5 4516 aa7.28□□□□□ -1.24
SCFD1-215ENST00000555259 M0R129 80 aa7.28□□□□□ -1.24
SCFD1-215ENST00000555259 ORC5O43913 435 aa7.28□□□□□ -1.24
SCFD1-215ENST00000555259 TRGV3P03979 118 aa7.28□□□□□ -1.24
SCFD1-215ENST00000555259 ISG15P05161 165 aa7.28□□□□□ -1.24
SCFD1-215ENST00000555259 PRKACGP22612 351 aa7.28□□□□□ -1.24
SCFD1-215ENST00000555259 CD40LGP29965 261 aa7.28□□□□□ -1.24
SCFD1-215ENST00000555259 TMEM267Q0VDI3 215 aaPredicted RBP7.28□□□□□ -1.24
SCFD1-215ENST00000555259 KISS1Q15726 138 aa7.28□□□□□ -1.24
SCFD1-215ENST00000555259 ZSCAN26Q16670 478 aa7.28□□□□□ -1.24
SCFD1-215ENST00000555259 AKIRIN2Q53H80 203 aa7.28□□□□□ -1.24
SCFD1-215ENST00000555259 NXNL2Q5VZ03 156 aa7.28□□□□□ -1.24
SCFD1-215ENST00000555259 ABHD5Q8WTS1 349 aa7.28□□□□□ -1.24
SCFD1-215ENST00000555259 CCDC107Q8WV48 283 aa7.28□□□□□ -1.24
SCFD1-215ENST00000555259 OVOL2Q9BRP0 275 aa7.28□□□□□ -1.24
SCFD1-215ENST00000555259 SLC2A8Q9NY64 477 aa7.28□□□□□ -1.24
SCFD1-215ENST00000555259 H2AFY2Q9P0M6 372 aaPredicted RBP7.28□□□□□ -1.24
SCFD1-215ENST00000555259 RNF150Q9ULK6 438 aa7.28□□□□□ -1.24
SCFD1-215ENST00000555259 ANKRD34BA5PLL1 514 aa7.27□□□□□ -1.25
SCFD1-215ENST00000555259 OR11H12B2RN74 326 aa7.27□□□□□ -1.25
SCFD1-215ENST00000555259 OR2T7P0C7T2 308 aa7.27□□□□□ -1.25
SCFD1-215ENST00000555259 RAP2AP10114 183 aa7.27□□□□□ -1.25
SCFD1-215ENST00000555259 MECP2P51608 486 aaKnown RBP7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms