RNA–Protein interactions for RNA: ENST00000555055.5

XRCC3-211, Transcript of X-ray repair cross complementing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC3, Length 2,584 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-211ENST00000555055 GAR1Q9NY12 217 aaKnown RBP12.65□□□□□ -0.38
XRCC3-211ENST00000555055 ROS1P08922 2347 aa12.65□□□□□ -0.38
XRCC3-211ENST00000555055 HEATR1Q9H583 2144 aaKnown RBP12.65□□□□□ -0.38
XRCC3-211ENST00000555055 FUT3P21217 361 aa12.65□□□□□ -0.39
XRCC3-211ENST00000555055 ARR3P36575 388 aa12.65□□□□□ -0.39
XRCC3-211ENST00000555055 DEFA6Q01524 100 aa12.65□□□□□ -0.39
XRCC3-211ENST00000555055 TCF15Q12870 199 aa12.65□□□□□ -0.39
XRCC3-211ENST00000555055 CEACAM21Q3KPI0 293 aa12.65□□□□□ -0.39
XRCC3-211ENST00000555055 PYY3Q5JQD4 70 aa12.65□□□□□ -0.39
XRCC3-211ENST00000555055 C20orf204Q6ZNR8 217 aa12.65□□□□□ -0.39
XRCC3-211ENST00000555055 CXorf67Q86X51 503 aaPredicted RBP12.65□□□□□ -0.39
XRCC3-211ENST00000555055 OR13D1Q8NGV5 346 aa12.65□□□□□ -0.39
XRCC3-211ENST00000555055 HSF4Q9ULV5 492 aa12.65□□□□□ -0.39
XRCC3-211ENST00000555055 K7N7A8 449 aa12.64□□□□□ -0.39
XRCC3-211ENST00000555055 ST8SIA5O15466 376 aa12.64□□□□□ -0.39
XRCC3-211ENST00000555055 ZZEF1O43149 2961 aa12.64□□□□□ -0.39
XRCC3-211ENST00000555055 ARG1P05089 322 aa12.64□□□□□ -0.39
XRCC3-211ENST00000555055 DAOP14920 347 aa12.64□□□□□ -0.39
XRCC3-211ENST00000555055 BTF3P20290 206 aaKnown RBP12.64□□□□□ -0.39
XRCC3-211ENST00000555055 AADACP22760 399 aa12.64□□□□□ -0.39
XRCC3-211ENST00000555055 GPX4P36969 197 aaPredicted RBP12.64□□□□□ -0.39
XRCC3-211ENST00000555055 LSM5Q9Y4Y9 91 aaKnown RBP12.64□□□□□ -0.39
XRCC3-211ENST00000555055 ELOA3CA0A087WX78 387 aaPredicted RBP12.64□□□□□ -0.39
XRCC3-211ENST00000555055 SEC14L6B5MCN3 397 aa12.64□□□□□ -0.39
XRCC3-211ENST00000555055 SLC33A1O00400 549 aaPredicted RBP12.64□□□□□ -0.39
XRCC3-211ENST00000555055 TM4SF5O14894 197 aa12.64□□□□□ -0.39
XRCC3-211ENST00000555055 TFF1P04155 84 aa12.64□□□□□ -0.39
XRCC3-211ENST00000555055 ZNF728P0DKX0 622 aa12.64□□□□□ -0.39
XRCC3-211ENST00000555055 SOHLH1Q5JUK2 328 aa12.64□□□□□ -0.39
XRCC3-211ENST00000555055 NCMAPQ5T1S8 102 aa12.64□□□□□ -0.39
XRCC3-211ENST00000555055 C9orf106Q8NAJ2 232 aa12.64□□□□□ -0.39
XRCC3-211ENST00000555055 SIRT7Q9NRC8 400 aa12.64□□□□□ -0.39
XRCC3-211ENST00000555055 PTPRBP23467 1997 aa12.63□□□□□ -0.39
XRCC3-211ENST00000555055 IFITM10A6NMD0 228 aa12.63□□□□□ -0.39
XRCC3-211ENST00000555055 H7C1Q1 480 aa12.63□□□□□ -0.39
XRCC3-211ENST00000555055 MBPP02686 304 aaPredicted RBP12.63□□□□□ -0.39
XRCC3-211ENST00000555055 ABCA11PQ4W5N1 156 aa12.63□□□□□ -0.39
XRCC3-211ENST00000555055 MEX3BQ6ZN04 569 aaKnown RBP12.63□□□□□ -0.39
XRCC3-211ENST00000555055 LYZL2Q7Z4W2 148 aa12.63□□□□□ -0.39
XRCC3-211ENST00000555055 PRR18Q8N4B5 295 aa12.63□□□□□ -0.39
XRCC3-211ENST00000555055 SUMF2Q8NBJ7 301 aa12.63□□□□□ -0.39
XRCC3-211ENST00000555055 CD300LFQ8TDQ1 290 aa12.63□□□□□ -0.39
XRCC3-211ENST00000555055 RTN4IP1Q8WWV3 396 aaPredicted RBP12.63□□□□□ -0.39
XRCC3-211ENST00000555055 TAAR6Q96RI8 345 aa12.63□□□□□ -0.39
XRCC3-211ENST00000555055 C20orf24Q9BUV8 137 aa12.63□□□□□ -0.39
XRCC3-211ENST00000555055 SUCNR1Q9BXA5 334 aa12.63□□□□□ -0.39
XRCC3-211ENST00000555055 SMIM3Q9BZL3 60 aa12.63□□□□□ -0.39
XRCC3-211ENST00000555055 HIPK2Q9H2X6 1198 aa12.63□□□□□ -0.39
XRCC3-211ENST00000555055 WFDC1Q9HC57 220 aa12.63□□□□□ -0.39
XRCC3-211ENST00000555055 H0YL77 283 aa12.63□□□□□ -0.39
XRCC3-211ENST00000555055 TRAPPC2LH3BP13 241 aa12.63□□□□□ -0.39
XRCC3-211ENST00000555055 DIRAS3O95661 229 aa12.63□□□□□ -0.39
XRCC3-211ENST00000555055 IFNA10P01566 189 aa12.63□□□□□ -0.39
XRCC3-211ENST00000555055 HIST1H2AAQ96QV6 131 aa12.63□□□□□ -0.39
XRCC3-211ENST00000555055 ZNF286AQ9HBT8 521 aa12.63□□□□□ -0.39
XRCC3-211ENST00000555055 SLC2A9Q9NRM0 540 aa12.63□□□□□ -0.39
XRCC3-211ENST00000555055 UFSP2Q9NUQ7 469 aa12.63□□□□□ -0.39
XRCC3-211ENST00000555055 KCNIP3Q9Y2W7 256 aa12.63□□□□□ -0.39
XRCC3-211ENST00000555055 ANKRD30BLA7E2S9 258 aa12.62□□□□□ -0.39
XRCC3-211ENST00000555055 K7EM74 188 aa12.62□□□□□ -0.39
XRCC3-211ENST00000555055 TNFSF12O43508 249 aa12.62□□□□□ -0.39
XRCC3-211ENST00000555055 SS18L1O75177 396 aaPredicted RBP12.62□□□□□ -0.39
XRCC3-211ENST00000555055 HIST1H1BP16401 226 aaKnown RBP12.62□□□□□ -0.39
XRCC3-211ENST00000555055 WDR86Q86TI4 376 aa12.62□□□□□ -0.39
XRCC3-211ENST00000555055 OR5P3Q8WZ94 311 aa12.62□□□□□ -0.39
XRCC3-211ENST00000555055 NXPH3O95157 252 aa12.62□□□□□ -0.39
XRCC3-211ENST00000555055 PRH1P02810 166 aa12.62□□□□□ -0.39
XRCC3-211ENST00000555055 SELLP14151 372 aa12.62□□□□□ -0.39
XRCC3-211ENST00000555055 TMEM187Q14656 261 aa12.62□□□□□ -0.39
XRCC3-211ENST00000555055 HERPUD1Q15011 391 aa12.62□□□□□ -0.39
XRCC3-211ENST00000555055 RPRMLQ8N4K4 120 aa12.62□□□□□ -0.39
XRCC3-211ENST00000555055 ZNF610Q8N9Z0 462 aa12.62□□□□□ -0.39
XRCC3-211ENST00000555055 GFOD1Q9NXC2 390 aa12.62□□□□□ -0.39
XRCC3-211ENST00000555055 DCAF16Q9NXF7 216 aa12.62□□□□□ -0.39
XRCC3-211ENST00000555055 IL36GQ9NZH8 169 aa12.62□□□□□ -0.39
XRCC3-211ENST00000555055 TGOLN2O43493 480 aa12.61□□□□□ -0.39
XRCC3-211ENST00000555055 DTYMKP23919 212 aa12.61□□□□□ -0.39
XRCC3-211ENST00000555055 CEBPDP49716 269 aaPredicted RBP12.61□□□□□ -0.39
XRCC3-211ENST00000555055 GTF3AQ92664 365 aaKnown RBP12.61□□□□□ -0.39
XRCC3-211ENST00000555055 NAA60Q9H7X0 242 aa12.61□□□□□ -0.39
XRCC3-211ENST00000555055 DOK5Q9P104 306 aa12.61□□□□□ -0.39
XRCC3-211ENST00000555055 FBXO7Q9Y3I1 522 aa12.61□□□□□ -0.39
XRCC3-211ENST00000555055 RPS10P46783 165 aaKnown RBP12.61□□□□□ -0.39
XRCC3-211ENST00000555055 UBE2NP61088 152 aaKnown RBP12.61□□□□□ -0.39
XRCC3-211ENST00000555055 FGF12P61328 243 aa12.61□□□□□ -0.39
XRCC3-211ENST00000555055 SPIN3Q5JUX0 258 aa12.61□□□□□ -0.39
XRCC3-211ENST00000555055 PRSS33Q8NF86 280 aa12.61□□□□□ -0.39
XRCC3-211ENST00000555055 GMPPAQ96IJ6 420 aaPredicted RBP12.61□□□□□ -0.39
XRCC3-211ENST00000555055 C18orf12Q96KH6 178 aa12.61□□□□□ -0.39
XRCC3-211ENST00000555055 TP53RKQ96S44 253 aa12.61□□□□□ -0.39
XRCC3-211ENST00000555055 PRDM13Q9H4Q3 707 aa12.61□□□□□ -0.39
XRCC3-211ENST00000555055 KIAA1456Q9P272 454 aa12.61□□□□□ -0.39
XRCC3-211ENST00000555055 CLCF1Q9UBD9 225 aa12.61□□□□□ -0.39
XRCC3-211ENST00000555055 IGKV1D-13A0A0B4J2D9 117 aa12.6□□□□□ -0.39
XRCC3-211ENST00000555055 CDIPTO14735 213 aa12.6□□□□□ -0.39
XRCC3-211ENST00000555055 PHF1O43189 567 aaPredicted RBP12.6□□□□□ -0.39
XRCC3-211ENST00000555055 YIF1AO95070 293 aa12.6□□□□□ -0.39
XRCC3-211ENST00000555055 GRPP07492 148 aa12.6□□□□□ -0.39
XRCC3-211ENST00000555055 IGKV1-13P0DP09 117 aa12.6□□□□□ -0.39
XRCC3-211ENST00000555055 COX5BP10606 129 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms