RNA–Protein interactions for RNA: ENST00000554685.2

SHOX2-206, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-206ENST00000554685 C15orf65H3BRN8 121 aa11.87□□□□□ -0.51
SHOX2-206ENST00000554685 BET1O15155 118 aa11.87□□□□□ -0.51
SHOX2-206ENST00000554685 FCN3O75636 299 aa11.87□□□□□ -0.51
SHOX2-206ENST00000554685 ZNF728P0DKX0 622 aa11.87□□□□□ -0.51
SHOX2-206ENST00000554685 ZBTB25P24278 435 aa11.87□□□□□ -0.51
SHOX2-206ENST00000554685 SLC6A1P30531 599 aa11.87□□□□□ -0.51
SHOX2-206ENST00000554685 LMO4P61968 165 aa11.87□□□□□ -0.51
SHOX2-206ENST00000554685 TRIM16LQ309B1 348 aa11.87□□□□□ -0.51
SHOX2-206ENST00000554685 Q5PR19 223 aa11.87□□□□□ -0.51
SHOX2-206ENST00000554685 TMEM200BQ69YZ2 307 aa11.87□□□□□ -0.51
SHOX2-206ENST00000554685 FGFRL1Q8N441 504 aa11.87□□□□□ -0.51
SHOX2-206ENST00000554685 OR4D10Q8NGI6 311 aa11.87□□□□□ -0.51
SHOX2-206ENST00000554685 OR51S1Q8NGJ8 323 aa11.87□□□□□ -0.51
SHOX2-206ENST00000554685 GIMAP1Q8WWP7 306 aa11.87□□□□□ -0.51
SHOX2-206ENST00000554685 IL1F10Q8WWZ1 152 aa11.87□□□□□ -0.51
SHOX2-206ENST00000554685 KIRREL1Q96J84 757 aa11.87□□□□□ -0.51
SHOX2-206ENST00000554685 SCGB3A2Q96PL1 93 aa11.87□□□□□ -0.51
SHOX2-206ENST00000554685 SLC6A7Q99884 636 aa11.87□□□□□ -0.51
SHOX2-206ENST00000554685 SLC25A21Q9BQT8 299 aaPredicted RBP11.87□□□□□ -0.51
SHOX2-206ENST00000554685 LINC00574Q9H8X3 128 aa11.87□□□□□ -0.51
SHOX2-206ENST00000554685 JPT1Q9UK76 154 aa11.87□□□□□ -0.51
SHOX2-206ENST00000554685 FBN2P35556 2912 aa11.86□□□□□ -0.51
SHOX2-206ENST00000554685 TRBV6-7A0A0A0MS04 114 aa11.86□□□□□ -0.51
SHOX2-206ENST00000554685 PPIAL4CA0A0B4J2A2 164 aa11.86□□□□□ -0.51
SHOX2-206ENST00000554685 F2RL2O00254 374 aa11.86□□□□□ -0.51
SHOX2-206ENST00000554685 SDCBPO00560 298 aaPredicted RBP11.86□□□□□ -0.51
SHOX2-206ENST00000554685 ENSAO43768 121 aaKnown RBP11.86□□□□□ -0.51
SHOX2-206ENST00000554685 RGS11O94810 467 aa11.86□□□□□ -0.51
SHOX2-206ENST00000554685 RBP4P02753 201 aa11.86□□□□□ -0.51
SHOX2-206ENST00000554685 LIPFP07098 398 aa11.86□□□□□ -0.51
SHOX2-206ENST00000554685 ZNF735P0CB33 412 aa11.86□□□□□ -0.51
SHOX2-206ENST00000554685 PPIAL4GP0DN37 164 aa11.86□□□□□ -0.51
SHOX2-206ENST00000554685 CGB3P0DN86 165 aa11.86□□□□□ -0.51
SHOX2-206ENST00000554685 CGB7P0DN87 165 aa11.86□□□□□ -0.51
SHOX2-206ENST00000554685 USF1P22415 310 aaPredicted RBP11.86□□□□□ -0.51
SHOX2-206ENST00000554685 FPR2P25090 351 aa11.86□□□□□ -0.51
SHOX2-206ENST00000554685 SSTR5P35346 364 aa11.86□□□□□ -0.51
SHOX2-206ENST00000554685 HERV-K104P61576 105 aa11.86□□□□□ -0.51
SHOX2-206ENST00000554685 RBMS2Q15434 407 aaKnown RBP11.86□□□□□ -0.51
SHOX2-206ENST00000554685 SCGB2B2Q4G0G5 96 aa11.86□□□□□ -0.51
SHOX2-206ENST00000554685 IGSF11Q5DX21 431 aa11.86□□□□□ -0.51
SHOX2-206ENST00000554685 FAAP20Q6NZ36 180 aa11.86□□□□□ -0.51
SHOX2-206ENST00000554685 PLET1Q6UQ28 207 aa11.86□□□□□ -0.51
SHOX2-206ENST00000554685 DHRS11Q6UWP2 260 aa11.86□□□□□ -0.51
SHOX2-206ENST00000554685 TCF23Q7RTU1 214 aa11.86□□□□□ -0.51
SHOX2-206ENST00000554685 DUSP18Q8NEJ0 188 aa11.86□□□□□ -0.51
SHOX2-206ENST00000554685 OR52M1Q8NGK5 317 aa11.86□□□□□ -0.51
SHOX2-206ENST00000554685 OR1L1Q8NH94 360 aa11.86□□□□□ -0.51
SHOX2-206ENST00000554685 FAM216AQ8WUB2 273 aa11.86□□□□□ -0.51
SHOX2-206ENST00000554685 IDI2-AS1Q9NZ38 188 aa11.86□□□□□ -0.51
SHOX2-206ENST00000554685 ZNF69Q9UC07 566 aa11.86□□□□□ -0.51
SHOX2-206ENST00000554685 SLC23A1Q9UHI7 598 aa11.86□□□□□ -0.51
SHOX2-206ENST00000554685 CRYBG3Q68DQ2 2970 aa11.86□□□□□ -0.51
SHOX2-206ENST00000554685 IGHV4-61A0A0C4DH41 118 aa11.85□□□□□ -0.51
SHOX2-206ENST00000554685 IGKV1-6A0A0C4DH72 117 aa11.85□□□□□ -0.51
SHOX2-206ENST00000554685 PHF1O43189 567 aaPredicted RBP11.85□□□□□ -0.51
SHOX2-206ENST00000554685 FCGR2CP31995 323 aa11.85□□□□□ -0.51
SHOX2-206ENST00000554685 BTCP35070 178 aa11.85□□□□□ -0.51
SHOX2-206ENST00000554685 ZNF273Q14593 569 aa11.85□□□□□ -0.51
SHOX2-206ENST00000554685 HERPUD1Q15011 391 aa11.85□□□□□ -0.51
SHOX2-206ENST00000554685 C17orf58Q2M2W7 97 aa11.85□□□□□ -0.51
SHOX2-206ENST00000554685 HEPN1Q6WQI6 88 aa11.85□□□□□ -0.51
SHOX2-206ENST00000554685 IDO2Q6ZQW0 420 aa11.85□□□□□ -0.51
SHOX2-206ENST00000554685 NRARPQ7Z6K4 114 aa11.85□□□□□ -0.51
SHOX2-206ENST00000554685 KIR3DL3Q8N743 410 aa11.85□□□□□ -0.51
SHOX2-206ENST00000554685 LY6G5BQ8NDX9 201 aa11.85□□□□□ -0.51
SHOX2-206ENST00000554685 TERB2Q8NHR7 220 aa11.85□□□□□ -0.51
SHOX2-206ENST00000554685 CHPT1Q8WUD6 406 aa11.85□□□□□ -0.51
SHOX2-206ENST00000554685 FOXC2Q99958 501 aa11.85□□□□□ -0.51
SHOX2-206ENST00000554685 ZNF2Q9BSG1 426 aaPredicted RBP11.85□□□□□ -0.51
SHOX2-206ENST00000554685 TOLLIPQ9H0E2 274 aa11.85□□□□□ -0.51
SHOX2-206ENST00000554685 OR2S2Q9NQN1 319 aa11.85□□□□□ -0.51
SHOX2-206ENST00000554685 GNG12Q9UBI6 72 aa11.85□□□□□ -0.51
SHOX2-206ENST00000554685 NUBP2Q9Y5Y2 271 aa11.85□□□□□ -0.51
SHOX2-206ENST00000554685 FASNP49327 2511 aaKnown RBP11.85□□□□□ -0.51
SHOX2-206ENST00000554685 AKAP6Q13023 2319 aa11.85□□□□□ -0.51
SHOX2-206ENST00000554685 FAM172BPA6NC97 362 aa11.84□□□□□ -0.51
SHOX2-206ENST00000554685 NDUFB6O95139 128 aa11.84□□□□□ -0.51
SHOX2-206ENST00000554685 OXA1LQ15070 435 aa11.84□□□□□ -0.51
SHOX2-206ENST00000554685 SURF2Q15527 256 aaPredicted RBP11.84□□□□□ -0.51
SHOX2-206ENST00000554685 PLA1AQ53H76 456 aa11.84□□□□□ -0.51
SHOX2-206ENST00000554685 LY6G6FQ5SQ64 297 aa11.84□□□□□ -0.51
SHOX2-206ENST00000554685 LPCAT3Q6P1A2 487 aa11.84□□□□□ -0.51
SHOX2-206ENST00000554685 LHFPL1Q86WI0 220 aa11.84□□□□□ -0.51
SHOX2-206ENST00000554685 H1FOOQ8IZA3 346 aaPredicted RBP11.84□□□□□ -0.51
SHOX2-206ENST00000554685 RFESDQ8TAC1 157 aa11.84□□□□□ -0.51
SHOX2-206ENST00000554685 EDARADDQ8WWZ3 215 aa11.84□□□□□ -0.51
SHOX2-206ENST00000554685 POLR3KQ9Y2Y1 108 aaPredicted RBP11.84□□□□□ -0.51
SHOX2-206ENST00000554685 CELSR2Q9HCU4 2923 aa11.83□□□□□ -0.51
SHOX2-206ENST00000554685 PTPN13Q12923 2485 aa11.83□□□□□ -0.52
SHOX2-206ENST00000554685 C17orf98A8MV24 154 aa11.83□□□□□ -0.52
SHOX2-206ENST00000554685 KIAA1324LA8MWY0 1029 aaPredicted RBP11.83□□□□□ -0.52
SHOX2-206ENST00000554685 C22orf46C9J442 243 aa11.83□□□□□ -0.52
SHOX2-206ENST00000554685 M0R1W7 72 aa11.83□□□□□ -0.52
SHOX2-206ENST00000554685 ITGB1BP1O14713 200 aa11.83□□□□□ -0.52
SHOX2-206ENST00000554685 YPEL1O60688 119 aa11.83□□□□□ -0.52
SHOX2-206ENST00000554685 TUSC2O75896 110 aa11.83□□□□□ -0.52
SHOX2-206ENST00000554685 PPYP01298 95 aa11.83□□□□□ -0.52
SHOX2-206ENST00000554685 TCRBP04435 133 aa11.83□□□□□ -0.52
SHOX2-206ENST00000554685 CCL3L1P16619 93 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms