RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 GPR6P46095 362 aaPredicted RBP5.2□□□□□ -1.58
SCFD1-212ENST00000554486 GABRA2P47869 451 aa5.2□□□□□ -1.58
SCFD1-212ENST00000554486 PITPNBP48739 271 aa5.2□□□□□ -1.58
SCFD1-212ENST00000554486 BTG1P62324 171 aa5.2□□□□□ -1.58
SCFD1-212ENST00000554486 SCN1BQ07699 218 aa5.2□□□□□ -1.58
SCFD1-212ENST00000554486 MICBQ29980 383 aa5.2□□□□□ -1.58
SCFD1-212ENST00000554486 MPV17LQ2QL34 196 aa5.2□□□□□ -1.58
SCFD1-212ENST00000554486 TMEM155Q4W5P6 130 aa5.2□□□□□ -1.58
SCFD1-212ENST00000554486 OLFML2AQ68BL7 652 aa5.2□□□□□ -1.58
SCFD1-212ENST00000554486 CNIH2Q6PI25 160 aa5.2□□□□□ -1.58
SCFD1-212ENST00000554486 DUX4L9Q6RFH8 374 aaPredicted RBP5.2□□□□□ -1.58
SCFD1-212ENST00000554486 FIP1L1Q6UN15 594 aaKnown RBP5.2□□□□□ -1.58
SCFD1-212ENST00000554486 LYPD2Q6UXB3 125 aa5.2□□□□□ -1.58
SCFD1-212ENST00000554486 LINC00596Q86U02 117 aa5.2□□□□□ -1.58
SCFD1-212ENST00000554486 CCDC190Q86UF4 302 aa5.2□□□□□ -1.58
SCFD1-212ENST00000554486 LRRC75A-AS1Q8N1F1 130 aa5.2□□□□□ -1.58
SCFD1-212ENST00000554486 FGFRL1Q8N441 504 aa5.2□□□□□ -1.58
SCFD1-212ENST00000554486 OR10R2Q8NGX6 335 aa5.2□□□□□ -1.58
SCFD1-212ENST00000554486 C10orf105Q8TEF2 133 aa5.2□□□□□ -1.58
SCFD1-212ENST00000554486 RAB40AQ8WXH6 277 aa5.2□□□□□ -1.58
SCFD1-212ENST00000554486 RAB1CQ92928 201 aa5.2□□□□□ -1.58
SCFD1-212ENST00000554486 TRIM63Q969Q1 353 aa5.2□□□□□ -1.58
SCFD1-212ENST00000554486 SDSLQ96GA7 329 aa5.2□□□□□ -1.58
SCFD1-212ENST00000554486 CCL13Q99616 98 aa5.2□□□□□ -1.58
SCFD1-212ENST00000554486 SOSTQ9BQB4 213 aa5.2□□□□□ -1.58
SCFD1-212ENST00000554486 URM1Q9BTM9 101 aaKnown RBP5.2□□□□□ -1.58
SCFD1-212ENST00000554486 BPESC1Q9GZL8 116 aa5.2□□□□□ -1.58
SCFD1-212ENST00000554486 PRSS22Q9GZN4 317 aa5.2□□□□□ -1.58
SCFD1-212ENST00000554486 ATG5Q9H1Y0 275 aa5.2□□□□□ -1.58
SCFD1-212ENST00000554486 MYOZ1Q9NP98 299 aaPredicted RBP5.2□□□□□ -1.58
SCFD1-212ENST00000554486 RCC2Q9P258 522 aaKnown RBP5.2□□□□□ -1.58
SCFD1-212ENST00000554486 CTSZQ9UBR2 303 aa5.2□□□□□ -1.58
SCFD1-212ENST00000554486 DUX4Q9UBX2 424 aa5.2□□□□□ -1.58
SCFD1-212ENST00000554486 OR14J1Q9UGF5 321 aa5.2□□□□□ -1.58
SCFD1-212ENST00000554486 KCNK7Q9Y2U2 307 aa5.2□□□□□ -1.58
SCFD1-212ENST00000554486 MAB21L2Q9Y586 359 aa5.2□□□□□ -1.58
SCFD1-212ENST00000554486 PEX16Q9Y5Y5 336 aa5.2□□□□□ -1.58
SCFD1-212ENST00000554486 CSMD1Q96PZ7 3565 aa5.2□□□□□ -1.58
SCFD1-212ENST00000554486 CR1P17927 2039 aa5.19□□□□□ -1.58
SCFD1-212ENST00000554486 A0A096LNT2 108 aa5.19□□□□□ -1.58
SCFD1-212ENST00000554486 A0A0A6YYH2 397 aa5.19□□□□□ -1.58
SCFD1-212ENST00000554486 ISPDA4D126 451 aa5.19□□□□□ -1.58
SCFD1-212ENST00000554486 METTL21EPA6NDL7 271 aa5.19□□□□□ -1.58
SCFD1-212ENST00000554486 A6NJ64 397 aa5.19□□□□□ -1.58
SCFD1-212ENST00000554486 CEACAM18A8MTB9 384 aa5.19□□□□□ -1.58
SCFD1-212ENST00000554486 FAM25AB3EWG3 89 aa5.19□□□□□ -1.58
SCFD1-212ENST00000554486 FAM25CB3EWG5 89 aa5.19□□□□□ -1.58
SCFD1-212ENST00000554486 FAM25GB3EWG6 89 aa5.19□□□□□ -1.58
SCFD1-212ENST00000554486 F5H0A9 414 aaPredicted RBP5.19□□□□□ -1.58
SCFD1-212ENST00000554486 SIRPB1O00241 398 aa5.19□□□□□ -1.58
SCFD1-212ENST00000554486 MFNGO00587 321 aa5.19□□□□□ -1.58
SCFD1-212ENST00000554486 DEGS1O15121 323 aa5.19□□□□□ -1.58
SCFD1-212ENST00000554486 ADAM20O43506 726 aa5.19□□□□□ -1.58
SCFD1-212ENST00000554486 XRCC3O43542 346 aa5.19□□□□□ -1.58
SCFD1-212ENST00000554486 ZNF737O75373 536 aa5.19□□□□□ -1.58
SCFD1-212ENST00000554486 HLA-DQB1P01920 261 aa5.19□□□□□ -1.58
SCFD1-212ENST00000554486 CSF3P09919 207 aa5.19□□□□□ -1.58
SCFD1-212ENST00000554486 ZNF44P15621 663 aa5.19□□□□□ -1.58
SCFD1-212ENST00000554486 HIST1H1DP16402 221 aaKnown RBP5.19□□□□□ -1.58
SCFD1-212ENST00000554486 FUT3P21217 361 aa5.19□□□□□ -1.58
SCFD1-212ENST00000554486 MDH2P40926 338 aaKnown RBP5.19□□□□□ -1.58
SCFD1-212ENST00000554486 NR4A2P43354 598 aa5.19□□□□□ -1.58
SCFD1-212ENST00000554486 OR3A1P47881 315 aa5.19□□□□□ -1.58
SCFD1-212ENST00000554486 MADCAM1Q13477 382 aa5.19□□□□□ -1.58
SCFD1-212ENST00000554486 KCNJ8Q15842 424 aa5.19□□□□□ -1.58
SCFD1-212ENST00000554486 FAM189A2Q15884 450 aa5.19□□□□□ -1.58
SCFD1-212ENST00000554486 SRSF7Q16629 238 aaKnown RBP eCLIP5.19□□□□□ -1.58
SCFD1-212ENST00000554486 ZNF260Q3ZCT1 412 aa5.19□□□□□ -1.58
SCFD1-212ENST00000554486 ASPHD1Q5U4P2 390 aa5.19□□□□□ -1.58
SCFD1-212ENST00000554486 RAB12Q6IQ22 244 aa5.19□□□□□ -1.58
SCFD1-212ENST00000554486 CLEC2AQ6UVW9 174 aa5.19□□□□□ -1.58
SCFD1-212ENST00000554486 ZNF841Q6ZN19 808 aa5.19□□□□□ -1.58
SCFD1-212ENST00000554486 C17orf107Q6ZR85 190 aa5.19□□□□□ -1.58
SCFD1-212ENST00000554486 C6orf201Q7Z4U5 140 aa5.19□□□□□ -1.58
SCFD1-212ENST00000554486 FAM216BQ8N7L0 139 aa5.19□□□□□ -1.58
SCFD1-212ENST00000554486 SUMF2Q8NBJ7 301 aa5.19□□□□□ -1.58
SCFD1-212ENST00000554486 CHST4Q8NCG5 386 aa5.19□□□□□ -1.58
SCFD1-212ENST00000554486 ZNRF1Q8ND25 227 aa5.19□□□□□ -1.58
SCFD1-212ENST00000554486 OR4S1Q8NGB4 309 aa5.19□□□□□ -1.58
SCFD1-212ENST00000554486 OR56B1Q8NGI3 324 aa5.19□□□□□ -1.58
SCFD1-212ENST00000554486 ST8SIA4Q92187 359 aa5.19□□□□□ -1.58
SCFD1-212ENST00000554486 DYRK2Q92630 601 aa5.19□□□□□ -1.58
SCFD1-212ENST00000554486 RAB3CQ96E17 227 aa5.19□□□□□ -1.58
SCFD1-212ENST00000554486 S100A16Q96FQ6 103 aaKnown RBP5.19□□□□□ -1.58
SCFD1-212ENST00000554486 TIMD4Q96H15 378 aa5.19□□□□□ -1.58
SCFD1-212ENST00000554486 ARHGAP5-AS1Q96IT6 56 aa5.19□□□□□ -1.58
SCFD1-212ENST00000554486 NEDD4LQ96PU5 975 aa5.19□□□□□ -1.58
SCFD1-212ENST00000554486 SULT4A1Q9BR01 284 aa5.19□□□□□ -1.58
SCFD1-212ENST00000554486 NUDT16L1Q9BRJ7 211 aaKnown RBP5.19□□□□□ -1.58
SCFD1-212ENST00000554486 FAAP24Q9BTP7 215 aa5.19□□□□□ -1.58
SCFD1-212ENST00000554486 PECRQ9BY49 303 aa5.19□□□□□ -1.58
SCFD1-212ENST00000554486 SHARPINQ9H0F6 387 aa5.19□□□□□ -1.58
SCFD1-212ENST00000554486 DNTTIP1Q9H147 329 aa5.19□□□□□ -1.58
SCFD1-212ENST00000554486 KAAG1Q9UBP8 84 aa5.19□□□□□ -1.58
SCFD1-212ENST00000554486 EXTL2Q9UBQ6 330 aa5.19□□□□□ -1.58
SCFD1-212ENST00000554486 GLS2Q9UI32 602 aa5.19□□□□□ -1.58
SCFD1-212ENST00000554486 ELF5Q9UKW6 265 aaPredicted RBP5.19□□□□□ -1.58
SCFD1-212ENST00000554486 HSF4Q9ULV5 492 aa5.19□□□□□ -1.58
SCFD1-212ENST00000554486 CREBBPQ92793 2442 aa5.19□□□□□ -1.58
SCFD1-212ENST00000554486 TEX15Q9BXT5 2789 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms