RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 CLLU1OSQ5K130 101 aa3.07□□□□□ -1.92
SCFD1-211ENST00000554437 C3orf33Q6P1S2 294 aa3.07□□□□□ -1.92
SCFD1-211ENST00000554437 CEMP1Q6PRD7 247 aaPredicted RBP3.07□□□□□ -1.92
SCFD1-211ENST00000554437 LYPD2Q6UXB3 125 aa3.07□□□□□ -1.92
SCFD1-211ENST00000554437 ZFP2Q6ZN57 461 aa3.07□□□□□ -1.92
SCFD1-211ENST00000554437 GLT6D1Q7Z4J2 308 aa3.07□□□□□ -1.92
SCFD1-211ENST00000554437 SLC25A45Q8N413 288 aa3.07□□□□□ -1.92
SCFD1-211ENST00000554437 OR4M2Q8NGB6 313 aa3.07□□□□□ -1.92
SCFD1-211ENST00000554437 OR10G4Q8NGN3 311 aa3.07□□□□□ -1.92
SCFD1-211ENST00000554437 TNFAIP8L1Q8WVP5 186 aa3.07□□□□□ -1.92
SCFD1-211ENST00000554437 SLC35B4Q969S0 331 aa3.07□□□□□ -1.92
SCFD1-211ENST00000554437 PTX4Q96A99 478 aa3.07□□□□□ -1.92
SCFD1-211ENST00000554437 FXYD5Q96DB9 178 aa3.07□□□□□ -1.92
SCFD1-211ENST00000554437 DCUN1D1Q96GG9 259 aa3.07□□□□□ -1.92
SCFD1-211ENST00000554437 OR2V2Q96R30 315 aa3.07□□□□□ -1.92
SCFD1-211ENST00000554437 OR2A7Q96R45 310 aa3.07□□□□□ -1.92
SCFD1-211ENST00000554437 CMSS1Q9BQ75 279 aaKnown RBP3.07□□□□□ -1.92
SCFD1-211ENST00000554437 ANAPC13Q9BS18 74 aa3.07□□□□□ -1.92
SCFD1-211ENST00000554437 MED18Q9BUE0 208 aa3.07□□□□□ -1.92
SCFD1-211ENST00000554437 KIFC1Q9BW19 673 aa3.07□□□□□ -1.92
SCFD1-211ENST00000554437 DDA1Q9BW61 102 aa3.07□□□□□ -1.92
SCFD1-211ENST00000554437 ZNF717Q9BY31 904 aaPredicted RBP3.07□□□□□ -1.92
SCFD1-211ENST00000554437 DCSTAMPQ9H295 470 aa3.07□□□□□ -1.92
SCFD1-211ENST00000554437 OR51I2Q9H344 312 aa3.07□□□□□ -1.92
SCFD1-211ENST00000554437 BOLA2Q9H3K6 86 aa3.07□□□□□ -1.92
SCFD1-211ENST00000554437 PARP11Q9NR21 331 aa3.07□□□□□ -1.92
SCFD1-211ENST00000554437 ARMC1Q9NVT9 282 aa3.07□□□□□ -1.92
SCFD1-211ENST00000554437 KLF13Q9Y2Y9 288 aaPredicted RBP3.07□□□□□ -1.92
SCFD1-211ENST00000554437 FAM32AQ9Y421 112 aaKnown RBP3.07□□□□□ -1.92
SCFD1-211ENST00000554437 YTHDF2Q9Y5A9 579 aaKnown RBP3.07□□□□□ -1.92
SCFD1-211ENST00000554437 ZNF780BQ9Y6R6 833 aa3.07□□□□□ -1.92
SCFD1-211ENST00000554437 NACADO15069 1562 aa3.07□□□□□ -1.92
SCFD1-211ENST00000554437 A0A096LNJ9 63 aa3.06□□□□□ -1.92
SCFD1-211ENST00000554437 IGHV2-26A0A0B4J1V2 119 aa3.06□□□□□ -1.92
SCFD1-211ENST00000554437 CCL15-CCL14A0A0B4J2E2 113 aa3.06□□□□□ -1.92
SCFD1-211ENST00000554437 CD300LBA8K4G0 201 aa3.06□□□□□ -1.92
SCFD1-211ENST00000554437 K7EQS6 105 aa3.06□□□□□ -1.92
SCFD1-211ENST00000554437 CD5LO43866 347 aa3.06□□□□□ -1.92
SCFD1-211ENST00000554437 KCNK2O95069 426 aa3.06□□□□□ -1.92
SCFD1-211ENST00000554437 YIF1AO95070 293 aa3.06□□□□□ -1.92
SCFD1-211ENST00000554437 ATP5G1P05496 136 aa3.06□□□□□ -1.92
SCFD1-211ENST00000554437 OR5G3P0C626 314 aa3.06□□□□□ -1.92
SCFD1-211ENST00000554437 IL3RAP26951 378 aa3.06□□□□□ -1.92
SCFD1-211ENST00000554437 ALDH3A1P30838 453 aa3.06□□□□□ -1.92
SCFD1-211ENST00000554437 RPL5P46777 297 aaKnown RBP3.06□□□□□ -1.92
SCFD1-211ENST00000554437 OR1E2P47887 323 aa3.06□□□□□ -1.92
SCFD1-211ENST00000554437 NMUP48645 174 aa3.06□□□□□ -1.92
SCFD1-211ENST00000554437 HIST1H3AP68431 136 aa3.06□□□□□ -1.92
SCFD1-211ENST00000554437 BTN3A2P78410 334 aa3.06□□□□□ -1.92
SCFD1-211ENST00000554437 H3F3AP84243 136 aa3.06□□□□□ -1.92
SCFD1-211ENST00000554437 CDK5Q00535 292 aa3.06□□□□□ -1.92
SCFD1-211ENST00000554437 ERCC8Q13216 396 aa3.06□□□□□ -1.92
SCFD1-211ENST00000554437 EBPQ15125 230 aaKnown RBP3.06□□□□□ -1.92
SCFD1-211ENST00000554437 CDK10Q15131 360 aa3.06□□□□□ -1.92
SCFD1-211ENST00000554437 PTPRKQ15262 1439 aa3.06□□□□□ -1.92
SCFD1-211ENST00000554437 NCOA1Q15788 1441 aa3.06□□□□□ -1.92
SCFD1-211ENST00000554437 CCL15Q16663 113 aa3.06□□□□□ -1.92
SCFD1-211ENST00000554437 TMEM183BQ1AE95 376 aa3.06□□□□□ -1.92
SCFD1-211ENST00000554437 NXNL2Q5VZ03 156 aa3.06□□□□□ -1.92
SCFD1-211ENST00000554437 ELP2Q6IA86 826 aa3.06□□□□□ -1.92
SCFD1-211ENST00000554437 CLEC20AQ6ZU45 233 aa3.06□□□□□ -1.92
SCFD1-211ENST00000554437 HIST2H3AQ71DI3 136 aa3.06□□□□□ -1.92
SCFD1-211ENST00000554437 NEGR1Q7Z3B1 354 aa3.06□□□□□ -1.92
SCFD1-211ENST00000554437 TMEM144Q7Z5S9 345 aa3.06□□□□□ -1.92
SCFD1-211ENST00000554437 PRNTQ86SH4 94 aa3.06□□□□□ -1.92
SCFD1-211ENST00000554437 CALHM3Q86XJ0 350 aa3.06□□□□□ -1.92
SCFD1-211ENST00000554437 TMEM183AQ8IXX5 376 aa3.06□□□□□ -1.92
SCFD1-211ENST00000554437 ZNF676Q8N7Q3 588 aa3.06□□□□□ -1.92
SCFD1-211ENST00000554437 OR4M1Q8NGD0 313 aa3.06□□□□□ -1.92
SCFD1-211ENST00000554437 OR5K1Q8NHB7 308 aa3.06□□□□□ -1.92
SCFD1-211ENST00000554437 ORAOV1Q8WV07 137 aa3.06□□□□□ -1.92
SCFD1-211ENST00000554437 TWIST2Q8WVJ9 160 aa3.06□□□□□ -1.92
SCFD1-211ENST00000554437 ZNF649Q9BS31 505 aa3.06□□□□□ -1.92
SCFD1-211ENST00000554437 C11orf49Q9H6J7 331 aa3.06□□□□□ -1.92
SCFD1-211ENST00000554437 ENY2Q9NPA8 101 aa3.06□□□□□ -1.92
SCFD1-211ENST00000554437 TMEM216Q9P0N5 145 aa3.06□□□□□ -1.92
SCFD1-211ENST00000554437 OR12D3Q9UGF7 316 aa3.06□□□□□ -1.92
SCFD1-211ENST00000554437 POMPQ9Y244 141 aa3.06□□□□□ -1.92
SCFD1-211ENST00000554437 HDGFL3Q9Y3E1 203 aa3.06□□□□□ -1.92
SCFD1-211ENST00000554437 CAMSAP1Q5T5Y3 1602 aa3.05□□□□□ -1.92
SCFD1-211ENST00000554437 MYO15BQ96JP2 1530 aa3.05□□□□□ -1.92
SCFD1-211ENST00000554437 A0A0G2JMP0 313 aa3.05□□□□□ -1.92
SCFD1-211ENST00000554437 A0A0X1KG70 313 aa3.05□□□□□ -1.92
SCFD1-211ENST00000554437 C11orf94C9JXX5 98 aa3.05□□□□□ -1.92
SCFD1-211ENST00000554437 K7EPK0 472 aa3.05□□□□□ -1.92
SCFD1-211ENST00000554437 COPEO14579 308 aa3.05□□□□□ -1.92
SCFD1-211ENST00000554437 GYG2O15488 501 aa3.05□□□□□ -1.92
SCFD1-211ENST00000554437 SLC37A4O43826 429 aa3.05□□□□□ -1.92
SCFD1-211ENST00000554437 COX7A2P2O60397 106 aa3.05□□□□□ -1.92
SCFD1-211ENST00000554437 OR7C1O76099 320 aaPredicted RBP3.05□□□□□ -1.92
SCFD1-211ENST00000554437 IGLV2-23P01705 113 aa3.05□□□□□ -1.92
SCFD1-211ENST00000554437 GTF2F2P13984 249 aa3.05□□□□□ -1.92
SCFD1-211ENST00000554437 NELFEP18615 380 aaKnown RBP3.05□□□□□ -1.92
SCFD1-211ENST00000554437 GADD45AP24522 165 aa3.05□□□□□ -1.92
SCFD1-211ENST00000554437 ELK4P28324 431 aa3.05□□□□□ -1.92
SCFD1-211ENST00000554437 CRISP3P54108 245 aa3.05□□□□□ -1.92
SCFD1-211ENST00000554437 TAS2R41P59536 307 aa3.05□□□□□ -1.92
SCFD1-211ENST00000554437 PPP1CAP62136 330 aa3.05□□□□□ -1.92
SCFD1-211ENST00000554437 PSG4Q00888 419 aa3.05□□□□□ -1.92
SCFD1-211ENST00000554437 SSX1Q16384 188 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms