RNA–Protein interactions for RNA: ENST00000554081.5

PRPF39-205, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 3,223 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-205ENST00000554081 ZNF230Q9UIE0 474 aaPredicted RBP2.06□□□□□ -2.08
PRPF39-205ENST00000554081 PITPNC1Q9UKF7 332 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 COL27A1Q8IZC6 1860 aaPredicted RBP2.06□□□□□ -2.08
PRPF39-205ENST00000554081 ZNF469Q96JG9 3925 aaPredicted RBP2.06□□□□□ -2.08
PRPF39-205ENST00000554081 A0A0B4J293 547 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 FUOMA2VDF0 154 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 MAGEA13PA6NCF6 341 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 EFCAB10A6NFE3 127 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 IQCF6A8MYZ5 107 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 PRR32B1ATL7 298 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 TIMM23O14925 209 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 DENRO43583 198 aaKnown RBP2.06□□□□□ -2.08
PRPF39-205ENST00000554081 PSPNO60542 156 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 MMP23AO75900 390 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 PTHLHP12272 177 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 IGLL1P15814 213 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 MUC1P15941 1255 aaPredicted RBP2.06□□□□□ -2.08
PRPF39-205ENST00000554081 RAB4AP20338 218 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 BDKRB2P30411 391 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 CEACAM3P40198 252 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 FUT6P51993 359 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 LINC00205P59089 165 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 ATP6AP1Q15904 470 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 CEACAM21Q3KPI0 293 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 OLFML2AQ68BL7 652 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 GLT8D1Q68CQ7 371 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 TMEM200BQ69YZ2 307 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 ZFP1Q6P2D0 407 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 FBXW12Q6X9E4 464 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 SLC35E3Q7Z769 313 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 ZNF554Q86TJ5 538 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 LRRTM1Q86UE6 522 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 CATSPERDQ86XM0 798 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 DRAM1Q8N682 238 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 NHLRC2Q8NBF2 726 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 OR52L2PQ8NGH6 319 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 OR5A2Q8NGI9 324 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 RNF138Q8WVD3 245 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 LGALS12Q96DT0 336 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 PELI1Q96FA3 418 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 TMEM80Q96HE8 168 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 OR4C12Q96R67 309 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 HDHD3Q9BSH5 251 aaPredicted RBP2.06□□□□□ -2.08
PRPF39-205ENST00000554081 SLC25A33Q9BSK2 321 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 ZNF426Q9BUY5 554 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 TPPP3Q9BW30 176 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 TMEM59Q9BXS4 323 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 Q9H521 79 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 ZCCHC4Q9H5U6 513 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 FAM212BQ9NTI7 297 aaPredicted RBP2.06□□□□□ -2.08
PRPF39-205ENST00000554081 MCUBQ9NWR8 336 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 GAR1Q9NY12 217 aaKnown RBP2.06□□□□□ -2.08
PRPF39-205ENST00000554081 COA4Q9NYJ1 87 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 MTCH1Q9NZJ7 389 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 ZNF581Q9P0T4 197 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 STEAP1Q9UHE8 339 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 ZNF221Q9UK13 617 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 TPRKBQ9Y3C4 175 aa2.06□□□□□ -2.08
PRPF39-205ENST00000554081 CPAMD8Q8IZJ3 1885 aa2.05□□□□□ -2.08
PRPF39-205ENST00000554081 hCG_38984A0A1B0GV85 526 aa2.05□□□□□ -2.08
PRPF39-205ENST00000554081 SMIM31A0A1B0GVY4 71 aa2.05□□□□□ -2.08
PRPF39-205ENST00000554081 ODAMA1E959 279 aa2.05□□□□□ -2.08
PRPF39-205ENST00000554081 OR5B21A6NL26 309 aa2.05□□□□□ -2.08
PRPF39-205ENST00000554081 ZNF701M0R085 212 aaPredicted RBP2.05□□□□□ -2.08
PRPF39-205ENST00000554081 M0R1X1 148 aa2.05□□□□□ -2.08
PRPF39-205ENST00000554081 SLC16A6O15403 523 aa2.05□□□□□ -2.08
PRPF39-205ENST00000554081 RGS10O43665 173 aa2.05□□□□□ -2.08
PRPF39-205ENST00000554081 ZNF207O43670 478 aaKnown RBP2.05□□□□□ -2.08
PRPF39-205ENST00000554081 SSX5O60225 188 aa2.05□□□□□ -2.08
PRPF39-205ENST00000554081 SAP30O75446 220 aa2.05□□□□□ -2.08
PRPF39-205ENST00000554081 RP2O75695 350 aa2.05□□□□□ -2.08
PRPF39-205ENST00000554081 HLA-AP01891 365 aaKnown RBP2.05□□□□□ -2.08
PRPF39-205ENST00000554081 UBCP0CG48 685 aaKnown RBP2.05□□□□□ -2.08
PRPF39-205ENST00000554081 FAM106CPP0CH98 169 aa2.05□□□□□ -2.08
PRPF39-205ENST00000554081 HTN1P15515 57 aa2.05□□□□□ -2.08
PRPF39-205ENST00000554081 ARSBP15848 533 aa2.05□□□□□ -2.08
PRPF39-205ENST00000554081 PAX1P15863 534 aa2.05□□□□□ -2.08
PRPF39-205ENST00000554081 SRMP19623 302 aa2.05□□□□□ -2.08
PRPF39-205ENST00000554081 NFYAP23511 347 aaPredicted RBP2.05□□□□□ -2.08
PRPF39-205ENST00000554081 GADD45AP24522 165 aa2.05□□□□□ -2.08
PRPF39-205ENST00000554081 DCKP27707 260 aa2.05□□□□□ -2.08
PRPF39-205ENST00000554081 OPRL1P41146 370 aa2.05□□□□□ -2.08
PRPF39-205ENST00000554081 PTGFRP43088 359 aa2.05□□□□□ -2.08
PRPF39-205ENST00000554081 COMPP49747 757 aaPredicted RBP2.05□□□□□ -2.08
PRPF39-205ENST00000554081 GNG2P59768 71 aa2.05□□□□□ -2.08
PRPF39-205ENST00000554081 NANOS3P60323 173 aaKnown RBP2.05□□□□□ -2.08
PRPF39-205ENST00000554081 DIAPH2-AS1Q14236 149 aa2.05□□□□□ -2.08
PRPF39-205ENST00000554081 GK3PQ14409 553 aa2.05□□□□□ -2.08
PRPF39-205ENST00000554081 SPHARQ15513 63 aa2.05□□□□□ -2.08
PRPF39-205ENST00000554081 USF2Q15853 346 aaPredicted RBP2.05□□□□□ -2.08
PRPF39-205ENST00000554081 PNLIPRP3Q17RR3 467 aa2.05□□□□□ -2.08
PRPF39-205ENST00000554081 RSPO1Q2MKA7 263 aaPredicted RBP2.05□□□□□ -2.08
PRPF39-205ENST00000554081 C3orf36Q3SXR2 165 aa2.05□□□□□ -2.08
PRPF39-205ENST00000554081 SPATS1Q496A3 300 aa2.05□□□□□ -2.08
PRPF39-205ENST00000554081 SCGB2B2Q4G0G5 96 aa2.05□□□□□ -2.08
PRPF39-205ENST00000554081 TMEM255AQ5JRV8 349 aa2.05□□□□□ -2.08
PRPF39-205ENST00000554081 KLF17Q5JT82 389 aaPredicted RBP2.05□□□□□ -2.08
PRPF39-205ENST00000554081 LINC01590Q5TEZ4 76 aa2.05□□□□□ -2.08
PRPF39-205ENST00000554081 MBNL2Q5VZF2 373 aaKnown RBP2.05□□□□□ -2.08
PRPF39-205ENST00000554081 ACP7Q6ZNF0 438 aa2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms