RNA–Protein interactions for RNA: ENST00000553960.1

PABPN1-203, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 817 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-203ENST00000553960 VSIG10L2P0DP72 767 aa9.03□□□□□ -0.96
PABPN1-203ENST00000553960 PLA2G2AP14555 144 aa9.03□□□□□ -0.96
PABPN1-203ENST00000553960 FCGR2CP31995 323 aa9.03□□□□□ -0.96
PABPN1-203ENST00000553960 CD80P33681 288 aa9.03□□□□□ -0.96
PABPN1-203ENST00000553960 GLIPR1P48060 266 aa9.03□□□□□ -0.96
PABPN1-203ENST00000553960 LOXL3P58215 753 aa9.03□□□□□ -0.96
PABPN1-203ENST00000553960 AESQ08117 197 aa9.03□□□□□ -0.96
PABPN1-203ENST00000553960 DHRS2Q13268 280 aa9.03□□□□□ -0.96
PABPN1-203ENST00000553960 IGSF11Q5DX21 431 aa9.03□□□□□ -0.96
PABPN1-203ENST00000553960 ZNF841Q6ZN19 808 aa9.03□□□□□ -0.96
PABPN1-203ENST00000553960 C1orf122Q6ZSJ8 110 aa9.03□□□□□ -0.96
PABPN1-203ENST00000553960 GLCCI1Q86VQ1 547 aa9.03□□□□□ -0.96
PABPN1-203ENST00000553960 ZCCHC24Q8N2G6 241 aaKnown RBP9.03□□□□□ -0.96
PABPN1-203ENST00000553960 ASCC1Q8N9N2 400 aaKnown RBP9.03□□□□□ -0.96
PABPN1-203ENST00000553960 EDARADDQ8WWZ3 215 aa9.03□□□□□ -0.96
PABPN1-203ENST00000553960 CCL17Q92583 94 aa9.03□□□□□ -0.96
PABPN1-203ENST00000553960 TIMD4Q96H15 378 aa9.03□□□□□ -0.96
PABPN1-203ENST00000553960 CYYR1Q96J86 154 aa9.03□□□□□ -0.96
PABPN1-203ENST00000553960 ST6GAL2Q96JF0 529 aa9.03□□□□□ -0.96
PABPN1-203ENST00000553960 ZNF2Q9BSG1 426 aaPredicted RBP9.03□□□□□ -0.96
PABPN1-203ENST00000553960 BARX1Q9HBU1 254 aaPredicted RBP9.03□□□□□ -0.96
PABPN1-203ENST00000553960 CLN8Q9UBY8 286 aa9.03□□□□□ -0.96
PABPN1-203ENST00000553960 METRNQ9UJH8 293 aa9.03□□□□□ -0.96
PABPN1-203ENST00000553960 FLVCR2Q9UPI3 526 aa9.03□□□□□ -0.96
PABPN1-203ENST00000553960 POLR3KQ9Y2Y1 108 aaPredicted RBP9.03□□□□□ -0.96
PABPN1-203ENST00000553960 HELZ2Q9BYK8 2649 aaKnown RBP9.02□□□□□ -0.96
PABPN1-203ENST00000553960 MEIKINA0A087WXM9 373 aa9.02□□□□□ -0.97
PABPN1-203ENST00000553960 C9orf170A2RU37 121 aa9.02□□□□□ -0.97
PABPN1-203ENST00000553960 J3QKU1 62 aa9.02□□□□□ -0.97
PABPN1-203ENST00000553960 SDCBPO00560 298 aaPredicted RBP9.02□□□□□ -0.97
PABPN1-203ENST00000553960 RGS11O94810 467 aa9.02□□□□□ -0.97
PABPN1-203ENST00000553960 HBZP02008 142 aa9.02□□□□□ -0.97
PABPN1-203ENST00000553960 ZNF728P0DKX0 622 aa9.02□□□□□ -0.97
PABPN1-203ENST00000553960 COL8A2P25067 703 aa9.02□□□□□ -0.97
PABPN1-203ENST00000553960 GNRHRP30968 328 aa9.02□□□□□ -0.97
PABPN1-203ENST00000553960 SUPT4H1P63272 117 aaKnown RBP9.02□□□□□ -0.97
PABPN1-203ENST00000553960 SRPXP78539 464 aa9.02□□□□□ -0.97
PABPN1-203ENST00000553960 ATXN7L3Q14CW9 347 aaPredicted RBP9.02□□□□□ -0.97
PABPN1-203ENST00000553960 SCGB2B2Q4G0G5 96 aa9.02□□□□□ -0.97
PABPN1-203ENST00000553960 LRRC10Q5BKY1 277 aa9.02□□□□□ -0.97
PABPN1-203ENST00000553960 HEPN1Q6WQI6 88 aa9.02□□□□□ -0.97
PABPN1-203ENST00000553960 CCDC71LQ8N9Z2 235 aa9.02□□□□□ -0.97
PABPN1-203ENST00000553960 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.02□□□□□ -0.97
PABPN1-203ENST00000553960 ZNRF1Q8ND25 227 aa9.02□□□□□ -0.97
PABPN1-203ENST00000553960 LY6G5BQ8NDX9 201 aa9.02□□□□□ -0.97
PABPN1-203ENST00000553960 MARCH1Q8TCQ1 289 aa9.02□□□□□ -0.97
PABPN1-203ENST00000553960 IL22RA2Q969J5 263 aa9.02□□□□□ -0.97
PABPN1-203ENST00000553960 TMEM230Q96A57 120 aa9.02□□□□□ -0.97
PABPN1-203ENST00000553960 AGMATQ9BSE5 352 aa9.02□□□□□ -0.97
PABPN1-203ENST00000553960 SUCNR1Q9BXA5 334 aa9.02□□□□□ -0.97
PABPN1-203ENST00000553960 FXYD6Q9H0Q3 95 aa9.02□□□□□ -0.97
PABPN1-203ENST00000553960 SLC25A10Q9UBX3 287 aaPredicted RBP9.02□□□□□ -0.97
PABPN1-203ENST00000553960 C14orf166Q9Y224 244 aaKnown RBP9.02□□□□□ -0.97
PABPN1-203ENST00000553960 TRGV10A0A0A0MS01 117 aa9.01□□□□□ -0.97
PABPN1-203ENST00000553960 IGHV3-64DA0A0J9YX35 117 aa9.01□□□□□ -0.97
PABPN1-203ENST00000553960 DUXBA0A1W2PPF3 345 aa9.01□□□□□ -0.97
PABPN1-203ENST00000553960 A8MXK9 166 aa9.01□□□□□ -0.97
PABPN1-203ENST00000553960 C3orf80F5H4A9 247 aa9.01□□□□□ -0.97
PABPN1-203ENST00000553960 GPR31O00270 319 aa9.01□□□□□ -0.97
PABPN1-203ENST00000553960 NDUFB3O43676 98 aa9.01□□□□□ -0.97
PABPN1-203ENST00000553960 PFDN1O60925 122 aa9.01□□□□□ -0.97
PABPN1-203ENST00000553960 SFT2D2O95562 160 aa9.01□□□□□ -0.97
PABPN1-203ENST00000553960 CLDN1O95832 211 aa9.01□□□□□ -0.97
PABPN1-203ENST00000553960 DAOP14920 347 aa9.01□□□□□ -0.97
PABPN1-203ENST00000553960 ANXA7P20073 488 aaKnown RBP9.01□□□□□ -0.97
PABPN1-203ENST00000553960 AADACP22760 399 aa9.01□□□□□ -0.97
PABPN1-203ENST00000553960 CD34P28906 385 aa9.01□□□□□ -0.97
PABPN1-203ENST00000553960 GABRA2P47869 451 aa9.01□□□□□ -0.97
PABPN1-203ENST00000553960 CEBPDP49716 269 aaPredicted RBP9.01□□□□□ -0.97
PABPN1-203ENST00000553960 DLX6P56179 175 aa9.01□□□□□ -0.97
PABPN1-203ENST00000553960 HERV-K104P61576 105 aa9.01□□□□□ -0.97
PABPN1-203ENST00000553960 PTPN13Q12923 2485 aa9.01□□□□□ -0.97
PABPN1-203ENST00000553960 EIF4EBP1Q13541 118 aaPredicted RBP9.01□□□□□ -0.97
PABPN1-203ENST00000553960 C17orf58Q2M2W7 97 aa9.01□□□□□ -0.97
PABPN1-203ENST00000553960 TCF23Q7RTU1 214 aa9.01□□□□□ -0.97
PABPN1-203ENST00000553960 AKAP14Q86UN6 197 aa9.01□□□□□ -0.97
PABPN1-203ENST00000553960 TGIF2LYQ8IUE0 185 aa9.01□□□□□ -0.97
PABPN1-203ENST00000553960 LINC00311Q8N616 119 aa9.01□□□□□ -0.97
PABPN1-203ENST00000553960 OR5T2Q8NGG2 359 aa9.01□□□□□ -0.97
PABPN1-203ENST00000553960 OR13A1Q8NGR1 328 aa9.01□□□□□ -0.97
PABPN1-203ENST00000553960 MAFIPQ8WZ33 124 aa9.01□□□□□ -0.97
PABPN1-203ENST00000553960 GSX2Q9BZM3 304 aa9.01□□□□□ -0.97
PABPN1-203ENST00000553960 MED28Q9H204 178 aa9.01□□□□□ -0.97
PABPN1-203ENST00000553960 CLEC4MQ9H2X3 399 aaPredicted RBP9.01□□□□□ -0.97
PABPN1-203ENST00000553960 GAL3ST2Q9H3Q3 398 aa9.01□□□□□ -0.97
PABPN1-203ENST00000553960 UNKLQ9H9P5 680 aaKnown RBP9.01□□□□□ -0.97
PABPN1-203ENST00000553960 PATZ1Q9HBE1 687 aaKnown RBP9.01□□□□□ -0.97
PABPN1-203ENST00000553960 SLC2A9Q9NRM0 540 aa9.01□□□□□ -0.97
PABPN1-203ENST00000553960 DCAF16Q9NXF7 216 aa9.01□□□□□ -0.97
PABPN1-203ENST00000553960 KCNIP3Q9Y2W7 256 aa9.01□□□□□ -0.97
PABPN1-203ENST00000553960 TMPRSS2O15393 492 aa9□□□□□ -0.97
PABPN1-203ENST00000553960 FCN3O75636 299 aa9□□□□□ -0.97
PABPN1-203ENST00000553960 GYPAP02724 150 aa9□□□□□ -0.97
PABPN1-203ENST00000553960 RLN1P04808 185 aa9□□□□□ -0.97
PABPN1-203ENST00000553960 GIPP09681 153 aaPredicted RBP9□□□□□ -0.97
PABPN1-203ENST00000553960 COX6B1P14854 86 aa9□□□□□ -0.97
PABPN1-203ENST00000553960 S100GP29377 79 aa9□□□□□ -0.97
PABPN1-203ENST00000553960 SSTR2P30874 369 aa9□□□□□ -0.97
PABPN1-203ENST00000553960 RAB7AP51149 207 aa9□□□□□ -0.97
PABPN1-203ENST00000553960 LUMP51884 338 aaPredicted RBP9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms