RNA–Protein interactions for RNA: ENST00000553882.1

ACTN1-211, Transcript of actinin alpha 1, humanhuman

TSL 2

Gene ACTN1, Length 2,636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-211ENST00000553882 MYPOPQ86VE0 399 aaPredicted RBP12.39□□□□□ -0.43
ACTN1-211ENST00000553882 OR5D13Q8NGL4 314 aa12.39□□□□□ -0.43
ACTN1-211ENST00000553882 OR2W1Q9Y3N9 320 aa12.39□□□□□ -0.43
ACTN1-211ENST00000553882 SIRPB1O00241 398 aa12.39□□□□□ -0.43
ACTN1-211ENST00000553882 HSPA12AO43301 675 aa12.39□□□□□ -0.43
ACTN1-211ENST00000553882 SELEP16581 610 aa12.39□□□□□ -0.43
ACTN1-211ENST00000553882 TMEM267Q0VDI3 215 aaPredicted RBP12.39□□□□□ -0.43
ACTN1-211ENST00000553882 ZNF324BQ6AW86 544 aaPredicted RBP12.39□□□□□ -0.43
ACTN1-211ENST00000553882 GPR87Q9BY21 358 aa12.39□□□□□ -0.43
ACTN1-211ENST00000553882 BCL2L14Q9BZR8 327 aa12.39□□□□□ -0.43
ACTN1-211ENST00000553882 A0A1W2PPE3 182 aa12.38□□□□□ -0.43
ACTN1-211ENST00000553882 DEGS1O15121 323 aa12.38□□□□□ -0.43
ACTN1-211ENST00000553882 MT-ND4LP03901 98 aa12.38□□□□□ -0.43
ACTN1-211ENST00000553882 SP1P08047 785 aa12.38□□□□□ -0.43
ACTN1-211ENST00000553882 CELA3BP08861 270 aa12.38□□□□□ -0.43
ACTN1-211ENST00000553882 FBP1P09467 338 aa12.38□□□□□ -0.43
ACTN1-211ENST00000553882 ZNF16P17020 682 aaPredicted RBP12.38□□□□□ -0.43
ACTN1-211ENST00000553882 PAX9P55771 341 aa12.38□□□□□ -0.43
ACTN1-211ENST00000553882 OR2B8PP59922 312 aa12.38□□□□□ -0.43
ACTN1-211ENST00000553882 RNPS1Q15287 305 aaKnown RBP12.38□□□□□ -0.43
ACTN1-211ENST00000553882 SPSB3Q6PJ21 355 aa12.38□□□□□ -0.43
ACTN1-211ENST00000553882 LFNGQ8NES3 379 aa12.38□□□□□ -0.43
ACTN1-211ENST00000553882 PLK3Q9H4B4 646 aa12.38□□□□□ -0.43
ACTN1-211ENST00000553882 RYDENQ9NUL5 291 aaKnown RBP12.38□□□□□ -0.43
ACTN1-211ENST00000553882 PPP1R3CQ9UQK1 317 aa12.38□□□□□ -0.43
ACTN1-211ENST00000553882 RNF115Q9Y4L5 304 aa12.38□□□□□ -0.43
ACTN1-211ENST00000553882 CLEC18AA5D8T8 446 aa12.38□□□□□ -0.43
ACTN1-211ENST00000553882 RBFOX3A6NFN3 312 aa12.38□□□□□ -0.43
ACTN1-211ENST00000553882 ATXN7O15265 892 aaPredicted RBP12.38□□□□□ -0.43
ACTN1-211ENST00000553882 EIF3GO75821 320 aaKnown RBP eCLIP12.38□□□□□ -0.43
ACTN1-211ENST00000553882 S100A6P06703 90 aa12.38□□□□□ -0.43
ACTN1-211ENST00000553882 FOLR2P14207 255 aa12.38□□□□□ -0.43
ACTN1-211ENST00000553882 PAX6P26367 422 aa12.38□□□□□ -0.43
ACTN1-211ENST00000553882 HLA-DRB3P79483 266 aa12.38□□□□□ -0.43
ACTN1-211ENST00000553882 ADAM5Q6NVV9 412 aa12.38□□□□□ -0.43
ACTN1-211ENST00000553882 DHRS13Q6UX07 377 aa12.38□□□□□ -0.43
ACTN1-211ENST00000553882 Q6ZRM9 215 aa12.38□□□□□ -0.43
ACTN1-211ENST00000553882 DEFB123Q8N688 67 aa12.38□□□□□ -0.43
ACTN1-211ENST00000553882 CLEC18CQ8NCF0 446 aa12.38□□□□□ -0.43
ACTN1-211ENST00000553882 OR1J1Q8NGS3 322 aa12.38□□□□□ -0.43
ACTN1-211ENST00000553882 GPR146Q96CH1 333 aa12.38□□□□□ -0.43
ACTN1-211ENST00000553882 EGLN1Q9GZT9 426 aa12.38□□□□□ -0.43
ACTN1-211ENST00000553882 RBM7Q9Y580 266 aaKnown RBP12.38□□□□□ -0.43
ACTN1-211ENST00000553882 OR5B21A6NL26 309 aa12.37□□□□□ -0.43
ACTN1-211ENST00000553882 PRSS44E7EML9 344 aa12.37□□□□□ -0.43
ACTN1-211ENST00000553882 ERVS71-1P61550 626 aa12.37□□□□□ -0.43
ACTN1-211ENST00000553882 SLC10A1Q14973 349 aa12.37□□□□□ -0.43
ACTN1-211ENST00000553882 OR51I2Q9H344 312 aa12.37□□□□□ -0.43
ACTN1-211ENST00000553882 RIMS4Q9H426 269 aaPredicted RBP12.37□□□□□ -0.43
ACTN1-211ENST00000553882 MPC1Q9Y5U8 109 aa12.37□□□□□ -0.43
ACTN1-211ENST00000553882 C21orf140B9A014 251 aa12.37□□□□□ -0.43
ACTN1-211ENST00000553882 ZNF14P17017 642 aaPredicted RBP12.37□□□□□ -0.43
ACTN1-211ENST00000553882 S100GP29377 79 aa12.37□□□□□ -0.43
ACTN1-211ENST00000553882 IL24Q13007 206 aa12.37□□□□□ -0.43
ACTN1-211ENST00000553882 EIF2S3LQ2VIR3 472 aaKnown RBP12.37□□□□□ -0.43
ACTN1-211ENST00000553882 SLC25A24Q6NUK1 477 aa12.37□□□□□ -0.43
ACTN1-211ENST00000553882 H1FOOQ8IZA3 346 aaPredicted RBP12.37□□□□□ -0.43
ACTN1-211ENST00000553882 ARL6IP6Q8N6S5 226 aa12.37□□□□□ -0.43
ACTN1-211ENST00000553882 OR1K1Q8NGR3 316 aa12.37□□□□□ -0.43
ACTN1-211ENST00000553882 KCNS2Q9ULS6 477 aa12.37□□□□□ -0.43
ACTN1-211ENST00000553882 DUXBA0A1W2PPF3 345 aa12.36□□□□□ -0.43
ACTN1-211ENST00000553882 HOXA4Q00056 320 aaPredicted RBP12.36□□□□□ -0.43
ACTN1-211ENST00000553882 RNFT1Q5M7Z0 435 aa12.36□□□□□ -0.43
ACTN1-211ENST00000553882 AKR1C8PQ5T2L2 129 aa12.36□□□□□ -0.43
ACTN1-211ENST00000553882 RBMS3Q6XE24 437 aaKnown RBP12.36□□□□□ -0.43
ACTN1-211ENST00000553882 TMPRSS7Q7RTY8 843 aa12.36□□□□□ -0.43
ACTN1-211ENST00000553882 WDR86Q86TI4 376 aa12.36□□□□□ -0.43
ACTN1-211ENST00000553882 WDR1O75083 606 aa12.36□□□□□ -0.43
ACTN1-211ENST00000553882 IAPPP10997 89 aa12.36□□□□□ -0.43
ACTN1-211ENST00000553882 RAB5AP20339 215 aa12.36□□□□□ -0.43
ACTN1-211ENST00000553882 MEOX2P50222 304 aa12.36□□□□□ -0.43
ACTN1-211ENST00000553882 CTAG1AP78358 180 aa12.36□□□□□ -0.43
ACTN1-211ENST00000553882 BAXQ07812 192 aa12.36□□□□□ -0.43
ACTN1-211ENST00000553882 FBXW9Q5XUX1 488 aa12.36□□□□□ -0.43
ACTN1-211ENST00000553882 STX12Q86Y82 276 aa12.36□□□□□ -0.43
ACTN1-211ENST00000553882 THNSL2Q86YJ6 484 aa12.36□□□□□ -0.43
ACTN1-211ENST00000553882 ZNF295-AS1Q8N0V1 137 aa12.36□□□□□ -0.43
ACTN1-211ENST00000553882 OR10V1Q8NGI7 309 aa12.36□□□□□ -0.43
ACTN1-211ENST00000553882 OR2J1Q9GZK6 312 aa12.36□□□□□ -0.43
ACTN1-211ENST00000553882 OPA3Q9H6K4 179 aa12.36□□□□□ -0.43
ACTN1-211ENST00000553882 CACNG5Q9UF02 275 aa12.36□□□□□ -0.43
ACTN1-211ENST00000553882 TRAPPC2LQ9UL33 140 aa12.36□□□□□ -0.43
ACTN1-211ENST00000553882 KLF13Q9Y2Y9 288 aaPredicted RBP12.36□□□□□ -0.43
ACTN1-211ENST00000553882 KLRC4-KLRK1H3BQV0 150 aa12.35□□□□□ -0.43
ACTN1-211ENST00000553882 CDIPTO14735 213 aa12.35□□□□□ -0.43
ACTN1-211ENST00000553882 TNFSF15O95150 251 aa12.35□□□□□ -0.43
ACTN1-211ENST00000553882 CNOT4O95628 575 aaKnown RBP12.35□□□□□ -0.43
ACTN1-211ENST00000553882 OR2H2O95918 312 aa12.35□□□□□ -0.43
ACTN1-211ENST00000553882 IGKV1-39P01597 117 aa12.35□□□□□ -0.43
ACTN1-211ENST00000553882 IGLV2-14P01704 120 aa12.35□□□□□ -0.43
ACTN1-211ENST00000553882 IGKV1D-39P04432 117 aa12.35□□□□□ -0.43
ACTN1-211ENST00000553882 ZNF883P0CG24 379 aa12.35□□□□□ -0.43
ACTN1-211ENST00000553882 IDH3GP51553 393 aaPredicted RBP12.35□□□□□ -0.43
ACTN1-211ENST00000553882 RHEBQ15382 184 aa12.35□□□□□ -0.43
ACTN1-211ENST00000553882 ALKBH6Q3KRA9 238 aa12.35□□□□□ -0.43
ACTN1-211ENST00000553882 LINC00596Q86U02 117 aa12.35□□□□□ -0.43
ACTN1-211ENST00000553882 GCNT2Q8N0V5 402 aa12.35□□□□□ -0.43
ACTN1-211ENST00000553882 ABHD14BQ96IU4 210 aa12.35□□□□□ -0.43
ACTN1-211ENST00000553882 ATP5SQ99766 215 aa12.35□□□□□ -0.43
ACTN1-211ENST00000553882 SPRR3Q9UBC9 169 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms