RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 MED12LQ86YW9 2145 aa10.98□□□□□ -0.65
SHMT2-205ENST00000553474 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.98□□□□□ -0.65
SHMT2-205ENST00000553474 NKX2-8O15522 239 aa10.98□□□□□ -0.65
SHMT2-205ENST00000553474 ADAM20O43506 726 aa10.98□□□□□ -0.65
SHMT2-205ENST00000553474 SMPD2O60906 423 aa10.98□□□□□ -0.65
SHMT2-205ENST00000553474 PRH1P02810 166 aa10.98□□□□□ -0.65
SHMT2-205ENST00000553474 CA6P23280 308 aa10.98□□□□□ -0.65
SHMT2-205ENST00000553474 EIF2S3P41091 472 aaKnown RBP10.98□□□□□ -0.65
SHMT2-205ENST00000553474 TNFSF10P50591 281 aa10.98□□□□□ -0.65
SHMT2-205ENST00000553474 ZNF616Q08AN1 781 aa10.98□□□□□ -0.65
SHMT2-205ENST00000553474 ZNF146Q15072 292 aa10.98□□□□□ -0.65
SHMT2-205ENST00000553474 C3AR1Q16581 482 aa10.98□□□□□ -0.65
SHMT2-205ENST00000553474 OR2T2Q6IF00 324 aa10.98□□□□□ -0.65
SHMT2-205ENST00000553474 Q6P435 159 aa10.98□□□□□ -0.65
SHMT2-205ENST00000553474 DPPA3Q6W0C5 159 aa10.98□□□□□ -0.65
SHMT2-205ENST00000553474 P4HA3Q7Z4N8 544 aa10.98□□□□□ -0.65
SHMT2-205ENST00000553474 SPACA3Q8IXA5 215 aa10.98□□□□□ -0.65
SHMT2-205ENST00000553474 TMEM252Q8N6L7 170 aa10.98□□□□□ -0.65
SHMT2-205ENST00000553474 RAB40CQ96S21 281 aa10.98□□□□□ -0.65
SHMT2-205ENST00000553474 DEFB127Q9H1M4 99 aa10.98□□□□□ -0.65
SHMT2-205ENST00000553474 CDH20Q9HBT6 801 aa10.98□□□□□ -0.65
SHMT2-205ENST00000553474 SMCO4Q9NRQ5 59 aa10.98□□□□□ -0.65
SHMT2-205ENST00000553474 IL36RNQ9UBH0 155 aa10.98□□□□□ -0.65
SHMT2-205ENST00000553474 DKK4Q9UBT3 224 aa10.98□□□□□ -0.65
SHMT2-205ENST00000553474 IQCF6A8MYZ5 107 aa10.97□□□□□ -0.65
SHMT2-205ENST00000553474 K7N7A8 449 aa10.97□□□□□ -0.65
SHMT2-205ENST00000553474 WRBO00258 174 aa10.97□□□□□ -0.65
SHMT2-205ENST00000553474 DFFBO76075 338 aa10.97□□□□□ -0.65
SHMT2-205ENST00000553474 SERPINE2P07093 398 aa10.97□□□□□ -0.65
SHMT2-205ENST00000553474 ZNF44P15621 663 aa10.97□□□□□ -0.65
SHMT2-205ENST00000553474 NPBWR1P48145 328 aa10.97□□□□□ -0.65
SHMT2-205ENST00000553474 PPP1CBP62140 327 aa10.97□□□□□ -0.65
SHMT2-205ENST00000553474 GUK1Q16774 197 aa10.97□□□□□ -0.65
SHMT2-205ENST00000553474 ZNF497Q6ZNH5 498 aa10.97□□□□□ -0.65
SHMT2-205ENST00000553474 C1orf174Q8IYL3 243 aa10.97□□□□□ -0.65
SHMT2-205ENST00000553474 BATF2Q8N1L9 274 aa10.97□□□□□ -0.65
SHMT2-205ENST00000553474 C1orf162Q8NEQ5 155 aaPredicted RBP10.97□□□□□ -0.65
SHMT2-205ENST00000553474 OR10V1Q8NGI7 309 aa10.97□□□□□ -0.65
SHMT2-205ENST00000553474 CLCF1Q9UBD9 225 aa10.97□□□□□ -0.65
SHMT2-205ENST00000553474 MLXQ9UH92 298 aa10.97□□□□□ -0.65
SHMT2-205ENST00000553474 DOCK7Q96N67 2140 aa10.96□□□□□ -0.65
SHMT2-205ENST00000553474 ARGFXA6NJG6 315 aa10.96□□□□□ -0.65
SHMT2-205ENST00000553474 ZNF891A8MT65 544 aaPredicted RBP10.96□□□□□ -0.65
SHMT2-205ENST00000553474 HSPB6O14558 160 aa10.96□□□□□ -0.65
SHMT2-205ENST00000553474 HSD17B6O14756 317 aa10.96□□□□□ -0.65
SHMT2-205ENST00000553474 HS3ST1O14792 307 aa10.96□□□□□ -0.65
SHMT2-205ENST00000553474 SH2D1BO14796 132 aa10.96□□□□□ -0.65
SHMT2-205ENST00000553474 PGA5P0DJD9 388 aa10.96□□□□□ -0.65
SHMT2-205ENST00000553474 POLR2GP62487 172 aaKnown RBP eCLIP10.96□□□□□ -0.65
SHMT2-205ENST00000553474 TMEM88Q6PEY1 159 aa10.96□□□□□ -0.65
SHMT2-205ENST00000553474 Q6ZT83 130 aa10.96□□□□□ -0.65
SHMT2-205ENST00000553474 FAM214BQ7L5A3 538 aa10.96□□□□□ -0.65
SHMT2-205ENST00000553474 RDH5Q92781 318 aa10.96□□□□□ -0.65
SHMT2-205ENST00000553474 SCRT1Q9BWW7 348 aa10.96□□□□□ -0.65
SHMT2-205ENST00000553474 TUBA4BQ9H853 241 aa10.96□□□□□ -0.65
SHMT2-205ENST00000553474 UNKLQ9H9P5 680 aaKnown RBP10.96□□□□□ -0.65
SHMT2-205ENST00000553474 MBNL3Q9NUK0 354 aaKnown RBP10.96□□□□□ -0.65
SHMT2-205ENST00000553474 LIN7CQ9NUP9 197 aaKnown RBP10.96□□□□□ -0.65
SHMT2-205ENST00000553474 WIPI2Q9Y4P8 454 aa10.96□□□□□ -0.65
SHMT2-205ENST00000553474 ZFHX4Q86UP3 3567 aa10.96□□□□□ -0.66
SHMT2-205ENST00000553474 IGSF23A1L1A6 192 aa10.95□□□□□ -0.66
SHMT2-205ENST00000553474 RNF212BA8MTL3 300 aa10.95□□□□□ -0.66
SHMT2-205ENST00000553474 NDUFA2O43678 99 aa10.95□□□□□ -0.66
SHMT2-205ENST00000553474 SSSCA1O60232 199 aa10.95□□□□□ -0.66
SHMT2-205ENST00000553474 LILRA1O75019 489 aa10.95□□□□□ -0.66
SHMT2-205ENST00000553474 FOLR2P14207 255 aa10.95□□□□□ -0.66
SHMT2-205ENST00000553474 RPL23AP62750 156 aaKnown RBP10.95□□□□□ -0.66
SHMT2-205ENST00000553474 GUSBP1Q15486 140 aa10.95□□□□□ -0.66
SHMT2-205ENST00000553474 IGFL2Q6UWQ7 119 aa10.95□□□□□ -0.66
SHMT2-205ENST00000553474 C20orf204Q6ZNR8 217 aa10.95□□□□□ -0.66
SHMT2-205ENST00000553474 STX12Q86Y82 276 aa10.95□□□□□ -0.66
SHMT2-205ENST00000553474 CBLN2Q8IUK8 224 aa10.95□□□□□ -0.66
SHMT2-205ENST00000553474 C15orf54Q8N8G6 183 aa10.95□□□□□ -0.66
SHMT2-205ENST00000553474 HSD17B11Q8NBQ5 300 aa10.95□□□□□ -0.66
SHMT2-205ENST00000553474 SCCPDHQ8NBX0 429 aa10.95□□□□□ -0.66
SHMT2-205ENST00000553474 OR10Z1Q8NGY1 313 aa10.95□□□□□ -0.66
SHMT2-205ENST00000553474 SVIPQ8NHG7 77 aa10.95□□□□□ -0.66
SHMT2-205ENST00000553474 BSCL2Q96G97 398 aaPredicted RBP10.95□□□□□ -0.66
SHMT2-205ENST00000553474 ADAT1Q9BUB4 502 aaKnown RBP10.95□□□□□ -0.66
SHMT2-205ENST00000553474 ERRFI1Q9UJM3 462 aaPredicted RBP10.95□□□□□ -0.66
SHMT2-205ENST00000553474 RNF115Q9Y4L5 304 aa10.95□□□□□ -0.66
SHMT2-205ENST00000553474 WSB1Q9Y6I7 421 aa10.95□□□□□ -0.66
SHMT2-205ENST00000553474 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.95□□□□□ -0.66
SHMT2-205ENST00000553474 FAM24AA6NFZ4 105 aa10.95□□□□□ -0.66
SHMT2-205ENST00000553474 SLC33A1O00400 549 aaPredicted RBP10.95□□□□□ -0.66
SHMT2-205ENST00000553474 AGPAT2O15120 278 aa10.95□□□□□ -0.66
SHMT2-205ENST00000553474 MSMO1Q15800 293 aa10.95□□□□□ -0.66
SHMT2-205ENST00000553474 CXorf66Q5JRM2 361 aaPredicted RBP10.95□□□□□ -0.66
SHMT2-205ENST00000553474 RNFT1Q5M7Z0 435 aa10.95□□□□□ -0.66
SHMT2-205ENST00000553474 ZBTB34Q8NCN2 500 aa10.95□□□□□ -0.66
SHMT2-205ENST00000553474 OR5C1Q8NGR4 320 aa10.95□□□□□ -0.66
SHMT2-205ENST00000553474 OR2G3Q8NGZ4 309 aa10.95□□□□□ -0.66
SHMT2-205ENST00000553474 PLPPR1Q8TBJ4 325 aa10.95□□□□□ -0.66
SHMT2-205ENST00000553474 EIF5A2Q9GZV4 153 aaKnown RBP10.95□□□□□ -0.66
SHMT2-205ENST00000553474 SLC35B3Q9H1N7 401 aa10.95□□□□□ -0.66
SHMT2-205ENST00000553474 TAAR3PQ9P1P4 343 aa10.95□□□□□ -0.66
SHMT2-205ENST00000553474 KLF2Q9Y5W3 355 aaPredicted RBP10.95□□□□□ -0.66
SHMT2-205ENST00000553474 PTPRQQ9UMZ3 2332 aa10.95□□□□□ -0.66
SHMT2-205ENST00000553474 CACNA1GO43497 2377 aa10.94□□□□□ -0.66
SHMT2-205ENST00000553474 TPRP12270 2363 aaKnown RBP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms